Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060630.seq
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    24   3.8  
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    24   3.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   6.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.8  

>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 252 WVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQ 359
           W+     + Y+EEAN    ++     +G KE +A Q
Sbjct: 188 WMRRMQELPYYEEANGTGALELAEFVLGKKEANASQ 223


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 252 WVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQ 359
           W+     + Y+EEAN    ++     +G KE +A Q
Sbjct: 188 WMRRMQELPYYEEANGTGALELAEFVLGKKEANASQ 223


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 238 EVTVSGLRFIILFNTLKKQIF 300
           +V   GLRFI+L N L ++ F
Sbjct: 10  DVQFRGLRFIVLANPLDRRNF 30


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 246 CKWVEVHNPIQYFEEANFPD 305
           C  ++++NP  YF E N PD
Sbjct: 234 CPPMQIYNPTNYFWEPN-PD 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,734
Number of Sequences: 2352
Number of extensions: 8705
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)