Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060629.seq
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001732-1|AAN71487.1|  199|Drosophila melanogaster RE70963p pro...    54   2e-07
AE014297-910|AAF54361.2|  199|Drosophila melanogaster CG33936-PB...    54   2e-07
AE014297-909|AAF54360.2|  199|Drosophila melanogaster CG33936-PA...    54   2e-07
AJ421016-1|CAD12856.1|  206|Drosophila melanogaster hypothetical...    53   4e-07
AY058763-1|AAL13992.1|  696|Drosophila melanogaster SD03358p pro...    33   0.42 
AE014296-213|AAF47467.1|  696|Drosophila melanogaster CG9139-PA ...    33   0.42 
AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    30   2.3  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    30   2.3  
AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like ...    30   3.0  

>BT001732-1|AAN71487.1|  199|Drosophila melanogaster RE70963p
           protein.
          Length = 199

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 455 MERESNPMEALCRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           MERESNPM+ +CRSGCGF   P        C+K++L+KK
Sbjct: 1   MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKK 39


>AE014297-910|AAF54361.2|  199|Drosophila melanogaster CG33936-PB,
           isoform B protein.
          Length = 199

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 455 MERESNPMEALCRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           MERESNPM+ +CRSGCGF   P        C+K++L+KK
Sbjct: 1   MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKK 39


>AE014297-909|AAF54360.2|  199|Drosophila melanogaster CG33936-PA,
           isoform A protein.
          Length = 199

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 455 MERESNPMEALCRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           MERESNPM+ +CRSGCGF   P        C+K++L+KK
Sbjct: 1   MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKK 39


>AJ421016-1|CAD12856.1|  206|Drosophila melanogaster hypothetical
           protein protein.
          Length = 206

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = +2

Query: 455 MERESNPMEALCRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           MERESNPM+ +CRSGCGF   P        C+K++L KK
Sbjct: 1   MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLSKK 39


>AY058763-1|AAL13992.1|  696|Drosophila melanogaster SD03358p
           protein.
          Length = 696

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 488 CRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           CRSGCGF   P        CF+E    K
Sbjct: 19  CRSGCGFYGTPQNEGLCSMCFREKFNDK 46


>AE014296-213|AAF47467.1|  696|Drosophila melanogaster CG9139-PA
           protein.
          Length = 696

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 488 CRSGCGFTAIPPQTDFAQFCFKEALKKK 571
           CRSGCGF   P        CF+E    K
Sbjct: 19  CRSGCGFYGTPQNEGLCSMCFREKFNDK 46


>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 252 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 100
           +Y   FC RTF+ H  +   K+   PN  + K + PS+   +T        HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 252 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 100
           +Y   FC RTF+ H  +   K+   PN  + K + PS+   +T        HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614


>AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like
           protein protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 129 VSLVCELKGLRTWKDICLVRNSLFQQQCVLQ 221
           +S+V  L+G   W+D C  R +LF   C+ +
Sbjct: 306 LSIVGLLEGFERWRDWCPERTTLFSNHCIFR 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,259,220
Number of Sequences: 53049
Number of extensions: 523713
Number of successful extensions: 1387
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)