Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060628.seq
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    25   2.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.7  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 395 HHQTV*ITMVLIDLYR*LVDQAGF-VLPQSINXRPN 291
           H Q +   + L+DLY  LVD AG   +P+    RP+
Sbjct: 361 HQQKIDNVVELLDLYSTLVDLAGLPPVPRCDEQRPH 396


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 531 VSTIKTMHKCVPIFSLCL 478
           +ST++++H C+  F+L L
Sbjct: 198 ISTLRSLHDCISSFTLRL 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,545
Number of Sequences: 2352
Number of extensions: 9194
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)