Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060627.seq
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 131 1e-29
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 128 8e-29
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 117 2e-25
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 117 3e-25
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 109 7e-23
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 107 2e-22
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 103 4e-21
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 102 8e-21
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 102 8e-21
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 102 8e-21
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 100 2e-20
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 100 5e-20
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 98 2e-19
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 97 3e-19
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 93 6e-18
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 92 1e-17
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 85 9e-16
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 85 1e-15
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 84 2e-15
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 84 3e-15
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 7e-15
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 81 2e-14
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 79 8e-14
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 79 8e-14
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 8e-14
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 79 1e-13
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 78 1e-13
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 78 1e-13
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 78 2e-13
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 77 3e-13
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 77 3e-13
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 77 4e-13
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 77 4e-13
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 77 4e-13
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 75 1e-12
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 75 1e-12
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 75 1e-12
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 75 1e-12
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 75 2e-12
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 75 2e-12
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 75 2e-12
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 75 2e-12
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 74 3e-12
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 74 3e-12
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 73 4e-12
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 73 4e-12
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 5e-12
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 73 5e-12
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 73 7e-12
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 73 7e-12
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 72 1e-11
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 72 1e-11
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 72 1e-11
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 2e-11
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 71 3e-11
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 71 3e-11
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 4e-11
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 70 5e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 69 9e-11
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 1e-10
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 68 2e-10
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 66 5e-10
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 66 5e-10
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 66 5e-10
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 66 6e-10
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 66 6e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 66 8e-10
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 66 8e-10
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 66 8e-10
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 65 1e-09
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 64 2e-09
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 2e-09
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 64 3e-09
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 3e-09
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 64 3e-09
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 4e-09
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 6e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 63 6e-09
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 6e-09
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 62 1e-08
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 62 1e-08
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 61 2e-08
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 61 2e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 60 3e-08
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 3e-08
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 3e-08
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 3e-08
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 60 3e-08
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 60 4e-08
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 4e-08
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 60 4e-08
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 60 5e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 60 5e-08
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 60 5e-08
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 60 5e-08
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 59 7e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 59 7e-08
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 59 9e-08
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 59 9e-08
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 59 9e-08
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 58 1e-07
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 58 1e-07
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 58 1e-07
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 2e-07
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 58 2e-07
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 2e-07
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 58 2e-07
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 58 2e-07
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 58 2e-07
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 58 2e-07
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 57 3e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 57 3e-07
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 57 3e-07
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 57 4e-07
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 4e-07
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 57 4e-07
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 57 4e-07
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 57 4e-07
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 57 4e-07
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 56 5e-07
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 56 5e-07
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 56 5e-07
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 56 5e-07
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 56 7e-07
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 56 7e-07
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 56 7e-07
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 56 9e-07
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 56 9e-07
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 55 1e-06
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 55 1e-06
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 55 1e-06
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 55 1e-06
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 55 1e-06
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 55 2e-06
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 55 2e-06
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 55 2e-06
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 55 2e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 55 2e-06
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 55 2e-06
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 2e-06
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 54 2e-06
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 54 2e-06
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 54 2e-06
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 54 2e-06
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 54 2e-06
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 54 2e-06
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 54 2e-06
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 54 3e-06
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 3e-06
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 54 3e-06
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 54 4e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 54 4e-06
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 54 4e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 54 4e-06
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 54 4e-06
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 54 4e-06
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 54 4e-06
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 54 4e-06
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 54 4e-06
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 53 5e-06
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 53 5e-06
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 53 5e-06
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 53 5e-06
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 53 5e-06
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 53 5e-06
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 53 5e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 53 6e-06
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 6e-06
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 6e-06
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 53 6e-06
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 53 6e-06
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 53 6e-06
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 53 6e-06
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 53 6e-06
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 52 8e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 52 8e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 8e-06
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 52 8e-06
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 52 8e-06
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 52 8e-06
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 52 8e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 52 8e-06
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 52 1e-05
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 52 1e-05
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 52 1e-05
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 52 1e-05
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 52 1e-05
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 52 1e-05
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 52 1e-05
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 52 1e-05
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 52 1e-05
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 52 1e-05
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 52 1e-05
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 52 1e-05
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 1e-05
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 52 1e-05
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 52 1e-05
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 1e-05
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 52 1e-05
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 52 1e-05
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 52 1e-05
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 52 1e-05
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 52 1e-05
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 52 1e-05
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 2e-05
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 51 2e-05
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 51 2e-05
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 51 2e-05
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 51 2e-05
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 51 2e-05
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 51 2e-05
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 51 2e-05
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 51 2e-05
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 51 2e-05
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 51 2e-05
UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n... 51 2e-05
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 51 2e-05
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 51 2e-05
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 50 3e-05
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 50 3e-05
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 50 3e-05
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 50 3e-05
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 50 3e-05
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 50 3e-05
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 50 3e-05
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 50 3e-05
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 50 3e-05
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 50 3e-05
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 4e-05
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 50 4e-05
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 50 4e-05
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 50 4e-05
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 50 4e-05
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 50 4e-05
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 50 4e-05
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 50 4e-05
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 50 4e-05
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 50 4e-05
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 50 4e-05
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 50 4e-05
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 50 4e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 50 6e-05
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 50 6e-05
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 50 6e-05
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 50 6e-05
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 50 6e-05
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 50 6e-05
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 50 6e-05
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 50 6e-05
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 50 6e-05
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 50 6e-05
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 50 6e-05
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 50 6e-05
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 50 6e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 49 8e-05
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 49 8e-05
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 49 8e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 49 8e-05
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 49 8e-05
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 49 8e-05
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 49 8e-05
UniRef50_Q4D7K2 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 49 8e-05
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 49 8e-05
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 49 8e-05
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 49 8e-05
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 49 8e-05
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 49 1e-04
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 49 1e-04
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 49 1e-04
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 49 1e-04
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 49 1e-04
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 49 1e-04
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 49 1e-04
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 48 1e-04
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 48 1e-04
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 48 1e-04
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 48 1e-04
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 48 1e-04
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 48 1e-04
UniRef50_A7RQ16 Cluster: Predicted protein; n=1; Nematostella ve... 48 1e-04
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 48 2e-04
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 2e-04
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 2e-04
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 48 2e-04
UniRef50_Q4QJE3 Cluster: ATP-dependent RNA helicase, putative; n... 48 2e-04
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 48 2e-04
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 48 2e-04
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 48 2e-04
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 48 2e-04
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 48 2e-04
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 48 2e-04
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 48 2e-04
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 2e-04
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 2e-04
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 48 2e-04
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 48 2e-04
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 48 2e-04
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 48 2e-04
UniRef50_A4I2K1 Cluster: DEAD-box helicase-like protein; n=5; Tr... 48 2e-04
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 48 2e-04
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 48 2e-04
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 48 2e-04
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 48 2e-04
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 48 2e-04
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 48 2e-04
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 48 2e-04
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 48 2e-04
UniRef50_UPI0000EFA0B7 Cluster: hypothetical protein An01g10870;... 47 3e-04
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 47 3e-04
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 47 3e-04
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 47 3e-04
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 47 3e-04
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 47 3e-04
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 47 3e-04
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 47 3e-04
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 47 3e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 47 3e-04
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 47 3e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 47 3e-04
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 47 3e-04
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve... 47 3e-04
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 47 3e-04
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 47 3e-04
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 47 3e-04
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 47 3e-04
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 47 3e-04
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 47 3e-04
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 47 3e-04
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 47 3e-04
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 47 3e-04
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 47 4e-04
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 47 4e-04
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 47 4e-04
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 47 4e-04
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 47 4e-04
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 47 4e-04
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 46 5e-04
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 5e-04
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 46 5e-04
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 46 5e-04
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 5e-04
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 46 5e-04
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 46 5e-04
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 46 5e-04
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 46 5e-04
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 46 5e-04
UniRef50_Q01BD2 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 46 5e-04
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 46 5e-04
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 46 5e-04
UniRef50_Q38DS7 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 46 5e-04
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 46 5e-04
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 46 5e-04
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 46 5e-04
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 46 5e-04
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 46 5e-04
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 46 5e-04
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 46 7e-04
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 46 7e-04
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 46 7e-04
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 46 7e-04
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 46 7e-04
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 46 7e-04
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 46 7e-04
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 46 7e-04
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 46 7e-04
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 46 7e-04
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 46 7e-04
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 46 7e-04
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 46 7e-04
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 46 7e-04
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 46 7e-04
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 46 7e-04
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 46 7e-04
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 46 7e-04
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 46 7e-04
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 46 7e-04
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 46 7e-04
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 46 7e-04
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 46 7e-04
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 46 7e-04
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 46 7e-04
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 46 7e-04
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 46 7e-04
UniRef50_Q4PGW1 Cluster: Putative uncharacterized protein; n=1; ... 36 9e-04
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 46 0.001
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 46 0.001
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 46 0.001
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 46 0.001
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 46 0.001
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 46 0.001
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 46 0.001
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 0.001
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 46 0.001
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 0.001
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 46 0.001
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 46 0.001
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_A0CA40 Cluster: Chromosome undetermined scaffold_160, w... 46 0.001
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 46 0.001
UniRef50_Q5KCY8 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 46 0.001
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 46 0.001
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 46 0.001
UniRef50_O13622 Cluster: ATP-dependent RNA helicase mss116, mito... 46 0.001
UniRef50_UPI00015B4CF1 Cluster: PREDICTED: similar to DEAD box A... 45 0.001
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 45 0.001
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 0.001
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 45 0.001
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 45 0.001
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 45 0.001
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 45 0.001
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 45 0.001
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 45 0.001
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 45 0.001
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 45 0.001
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 45 0.001
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 45 0.001
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 45 0.001
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 45 0.001
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 45 0.001
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 45 0.001
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 45 0.001
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 45 0.001
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 45 0.001
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 45 0.001
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 45 0.002
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 45 0.002
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 45 0.002
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 45 0.002
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 45 0.002
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 45 0.002
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 45 0.002
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 45 0.002
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 45 0.002
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 45 0.002
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 45 0.002
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 45 0.002
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 45 0.002
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 44 0.002
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 44 0.002
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 44 0.002
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 44 0.002
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 131 bits (317), Expect = 1e-29
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +SYVR
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVR 384
Query: 477 NTCVFGGAPK 506
NTCVFGGAPK
Sbjct: 385 NTCVFGGAPK 394
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQ 205
D +L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV
Sbjct: 235 DFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVM 293
Query: 206 QGVKTMGYKEPTPIQAQ 256
+ ++ GYK PT IQAQ
Sbjct: 294 KEIRRQGYKAPTAIQAQ 310
Score = 36.3 bits (80), Expect = 0.57
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 223 GLQRTDAHSSSGWPIAMSGKNLVGVAK 303
G + A + GWPIAMSG N VG+AK
Sbjct: 300 GYKAPTAIQAQGWPIAMSGSNFVGIAK 326
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
Q RDL++G IVIATPG LI FL
Sbjct: 397 QMRDLQRGCEIVIATPGRLIDFL 419
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 128 bits (310), Expect = 8e-29
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG ++VR
Sbjct: 201 AQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVR 260
Query: 477 NTCVFGGAPK 506
NTC+FGGAPK
Sbjct: 261 NTCIFGGAPK 270
Score = 79.4 bits (187), Expect = 6e-14
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +2
Query: 23 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYV 202
W V+L PF KNFY P +VL R+ E E + +E+T+ G +V P FEE FPDYV
Sbjct: 109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYV 168
Query: 203 QQGVKTMGYKEPTPIQAQ 256
++ G+ +PT IQAQ
Sbjct: 169 MNEIRKQGFAKPTAIQAQ 186
Score = 41.1 bits (92), Expect = 0.020
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFL 580
+QARDLE+GV IVIATPG LI FL
Sbjct: 272 QQARDLERGVEIVIATPGRLIDFL 295
Score = 36.7 bits (81), Expect = 0.43
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 214 KDNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
+ G + A + GWPIAMSG++LVGVA+
Sbjct: 173 RKQGFAKPTAIQAQGWPIAMSGRDLVGVAQ 202
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 117 bits (282), Expect = 2e-25
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA DFG
Sbjct: 166 AQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINAN 225
Query: 477 NTCVFGGAPK 506
NTCVFGGAPK
Sbjct: 226 NTCVFGGAPK 235
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/84 (36%), Positives = 43/84 (51%)
Frame = +2
Query: 5 TRRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEA 184
T R W S L PF K+FY P + S +V+ Y K E+T+ G + P FE+
Sbjct: 68 TLRTLKWTSEELTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQG 127
Query: 185 NFPDYVQQGVKTMGYKEPTPIQAQ 256
PDY+ + G+ +PT IQAQ
Sbjct: 128 GLPDYILEEANKQGFSKPTAIQAQ 151
Score = 36.7 bits (81), Expect = 0.43
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
Q RDLE+G IVIATPG LI FL
Sbjct: 238 QIRDLERGAEIVIATPGRLIDFL 260
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 117 bits (281), Expect = 3e-25
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG +
Sbjct: 145 AKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIM 204
Query: 477 NTCVFGGAPKRSKPGTWRR 533
NTC+FGGA K + RR
Sbjct: 205 NTCIFGGASKHPQADDLRR 223
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GTRRRP-DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFE 178
G RP WD V L+PF K+F+ P +VL+RS EV +Y +K+E+T+ G V PI F
Sbjct: 45 GENLRPVRWDQVKLEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFG 104
Query: 179 EANFPDYVQQGVKTMGYKEPTPIQA 253
E+ FP + G++EPT IQA
Sbjct: 105 ESGFPSVFLDEMGRQGFQEPTSIQA 129
Score = 35.5 bits (78), Expect = 1.0
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
QA DL +GV IVIATPG LI FL
Sbjct: 217 QADDLRRGVEIVIATPGRLIDFL 239
Score = 33.1 bits (72), Expect = 5.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 223 GLQRTDAHSSSGWPIAMSGKNLVGVAK 303
G Q + + GW IAMSG+++VG+AK
Sbjct: 120 GFQEPTSIQAVGWSIAMSGRDMVGIAK 146
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 109 bits (261), Expect = 7e-23
Identities = 47/73 (64%), Positives = 61/73 (83%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++
Sbjct: 131 AKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIK 190
Query: 477 NTCVFGGAPKRSK 515
NTC+FGG KR +
Sbjct: 191 NTCLFGGGAKRQQ 203
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
+W+ L+ + Y P +RS E+ E+R E+T G +V +P FEE FP
Sbjct: 39 NWNHQKLESVTRLSYRPKVD-FRRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAE 97
Query: 200 VQQGVKTMGYKEPTPIQAQ 256
+ + + PTPIQ+Q
Sbjct: 98 IADEWRYAEFTTPTPIQSQ 116
Score = 35.5 bits (78), Expect = 1.0
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 250 SSGWPIAMSGKNLVGVAK 303
S GWPIAMSG+++VG+AK
Sbjct: 115 SQGWPIAMSGRDMVGIAK 132
Score = 34.3 bits (75), Expect = 2.3
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 506 KEQARDLEKGVXIVIATPGSLIGFL 580
++Q DL+ GV IVIATPG LI FL
Sbjct: 201 RQQGDDLKYGVEIVIATPGRLIDFL 225
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 107 bits (257), Expect = 2e-22
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG +S ++
Sbjct: 140 AETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIK 199
Query: 477 NTCVFGGAPK 506
NTC++GG PK
Sbjct: 200 NTCIYGGVPK 209
Score = 83.4 bits (197), Expect = 4e-15
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 217
L PF KNFY P++ + EVEEYR + E+T+ G +V PI+ F + FPDYV Q ++
Sbjct: 53 LPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDYVLQEIE 112
Query: 218 TMGYKEPTPIQAQ 256
G+ EPTPIQAQ
Sbjct: 113 KAGFTEPTPIQAQ 125
Score = 36.3 bits (80), Expect = 0.57
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
Q RDL+KGV IVIATPG LI L
Sbjct: 212 QVRDLQKGVEIVIATPGRLIDML 234
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 103 bits (246), Expect = 4e-21
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG +S +R
Sbjct: 178 AETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIR 237
Query: 477 NTCVFGGAPK 506
NTCV+GG PK
Sbjct: 238 NTCVYGGVPK 247
Score = 85.4 bits (202), Expect = 9e-16
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 11 RRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANF 190
+ +WD SL F K+FY HP V RS +VE +R KH++T++G V P++ F+EA F
Sbjct: 82 KNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGF 141
Query: 191 PDYVQQGVKTMGYKEPTPIQAQ 256
P YV VK G+ PT IQ+Q
Sbjct: 142 PRYVMDEVKAQGFPAPTAIQSQ 163
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 214 KDNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
K G A S GWP+A+SG+++VG+A+
Sbjct: 150 KAQGFPAPTAIQSQGWPMALSGRDVVGIAE 179
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 102 bits (244), Expect = 8e-21
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+Y+LPA++ I+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++
Sbjct: 42 TKTGSGKTLSYLLPALMPIDEQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAIKIK 101
Query: 477 NTCVFGGAPKR 509
N C+FGG+ KR
Sbjct: 102 NICLFGGSAKR 112
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 102 bits (244), Expect = 8e-21
Identities = 49/72 (68%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS--Y 470
+QTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG S
Sbjct: 273 AQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPL 332
Query: 471 VRNTCVFGGAPK 506
+R TC+FGGA K
Sbjct: 333 IRYTCIFGGALK 344
Score = 99 bits (238), Expect = 4e-20
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Frame = +2
Query: 14 RPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFP 193
+P W L+PF K+FY PHP V+ R+P EV+ +R + ++TV G V +P Q FEE NFP
Sbjct: 180 KPIWKD--LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFP 237
Query: 194 DYVQQGVKTMGYKEPTPIQAQAGR*LCL---ERI*LA*PNGFRQNVGLHLAS--NCAHK* 358
D+V + MG+ PT IQAQ G + L + + +A G + + L + AH+
Sbjct: 238 DFVMNEINKMGFPNPTAIQAQ-GWPIALSGRDLVGIA-QTGSGKTLAYMLPGIVHIAHQK 295
Query: 359 PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHIL-CS*HVCVWWCS*K-EQARDLEK 532
P E L + ++ F TH + C++ + K Q RDLE+
Sbjct: 296 PLQRGE--GPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDLER 353
Query: 533 GVXIVIATPGSLIGFL 580
GV +VIATPG LI FL
Sbjct: 354 GVEVVIATPGRLIDFL 369
Score = 33.9 bits (74), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 223 GLQRTDAHSSSGWPIAMSGKNLVGVAK 303
G A + GWPIA+SG++LVG+A+
Sbjct: 248 GFPNPTAIQAQGWPIALSGRDLVGIAQ 274
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 102 bits (244), Expect = 8e-21
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG S R
Sbjct: 295 AQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTR 354
Query: 477 NTCVFGGAPK 506
+TC++GGAPK
Sbjct: 355 STCIYGGAPK 364
Score = 87.0 bits (206), Expect = 3e-16
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +2
Query: 17 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 196
P D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 197 YVQQGVKTMGYKEPTPIQAQ 256
Y Q + G+ EPTPIQ+Q
Sbjct: 261 YCMQAIAKSGFVEPTPIQSQ 280
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
Q RDL +GV IVIATPG LI L
Sbjct: 367 QIRDLRRGVEIVIATPGRLIDML 389
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 100 bits (240), Expect = 2e-20
Identities = 46/76 (60%), Positives = 57/76 (75%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +++TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFS 210
Query: 459 HTSYVRNTCVFGGAPK 506
S +RNTC +GG PK
Sbjct: 211 TESKIRNTCAYGGVPK 226
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV-SGVEVHNPIQYFEEANFPD 196
DW +++L PF KNFY H + K S EV+E R+KH++T+ G V P+ + FPD
Sbjct: 63 DWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPD 122
Query: 197 YVQQGVKTMGYKEPTPIQAQ 256
YV + +K PTPIQ Q
Sbjct: 123 YVIKSLKNNNIVAPTPIQIQ 142
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 99.5 bits (237), Expect = 5e-20
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG +
Sbjct: 257 AQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKIS 316
Query: 477 NTCVFGGAPK 506
+ CV+GGAPK
Sbjct: 317 SVCVYGGAPK 326
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGV--EVHNPIQYFEEANFP 193
D+ V L+PF K FY ++ + E+ Y+ + + + EV P + E FP
Sbjct: 145 DYTKVELKPFQKVFYQVGKSI--HTDEEIATYQREKGIIIRSKHKEVPQPFIKWNETKFP 202
Query: 194 DYVQQGVKTMGYKEPTPIQAQ 256
Y+ ++ + EP PIQAQ
Sbjct: 203 KYIMSVIEDSKFSEPMPIQAQ 223
Score = 32.3 bits (70), Expect = 9.3
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 443 CCRFWTHILCS*HVCVWWCS*K-EQARDLEKGVXIVIATPGSLIGFL 580
C +F + S VCV+ + K Q ++L G IVIATPG LI FL
Sbjct: 306 CFKFGSKCKIS-SVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFL 351
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG +S ++
Sbjct: 254 AETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLK 313
Query: 477 NTCVFGGAPKRSKPGTWRR 533
+ +GG PKR + RR
Sbjct: 314 TSVAYGGVPKRFQTIALRR 332
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV-SGVEVHNPIQYFEEANFPD 196
+W+ + L F KNFY HP V + E +E R E+TV G +V P+ FE +FP
Sbjct: 160 NWNQIELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPR 219
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
Y+ ++ G+KEPTPIQ Q+
Sbjct: 220 YILSSIEAAGFKEPTPIQVQS 240
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/73 (57%), Positives = 60/73 (82%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG +S ++
Sbjct: 145 AETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLK 204
Query: 477 NTCVFGGAPKRSK 515
C++GGA K S+
Sbjct: 205 CACIYGGADKYSQ 217
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGV--EVHNPIQYFEEANFP 193
DW +L F K FY + R+ E+EE+ ++ ++ +V +P + + +FP
Sbjct: 52 DWTKENLTTFQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFP 109
Query: 194 DYVQQGVKTMGYKEPTPIQAQA 259
Y+ V +++P+PIQ+ A
Sbjct: 110 QYIMNEVTHAKFEKPSPIQSLA 131
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 97.1 bits (231), Expect = 3e-19
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG +R
Sbjct: 32 AETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKLR 91
Query: 477 NTCVFGGAPKRSKPGTWR 530
NT ++GG PKR + + R
Sbjct: 92 NTAIYGGVPKRPQQASIR 109
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 92.7 bits (220), Expect = 6e-18
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F +R
Sbjct: 169 AKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIR 228
Query: 477 NTCVFGGA 500
TC+FGGA
Sbjct: 229 QTCLFGGA 236
Score = 33.5 bits (73), Expect = 4.0
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 101 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQA 253
E ++ + + + +V +P FEE N PD + + + +++PTPIQ+
Sbjct: 103 EQVQFLKSNAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQS 153
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F +R
Sbjct: 131 AQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLR 190
Query: 477 NTCVFGGA 500
+T V+GGA
Sbjct: 191 STAVYGGA 198
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 TRRRPD-WDSV-SLQP--FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 172
TRR P +D + L P F KNFY ++ + +P EV +R +E+ V G V +PIQ
Sbjct: 29 TRREPQRYDPMPELAPVEFQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQK 88
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
FEEA F V + G+ EPT IQ Q
Sbjct: 89 FEEAGFSSEVVSSLVEKGFSEPTAIQGQ 116
Score = 32.7 bits (71), Expect = 7.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 217 DNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
+ G A GWP+A+SG+++VG+A+
Sbjct: 104 EKGFSEPTAIQGQGWPMALSGRDMVGIAQ 132
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 85.4 bits (202), Expect = 9e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 137 AETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQ 205
D L F KNFY P+V + EVE YR + E+TV G +V P++ F + FP+YV
Sbjct: 46 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 105
Query: 206 QGVKTMGYKEPTPIQAQ 256
Q + G+ EPTPIQ+Q
Sbjct: 106 QEITKAGFVEPTPIQSQ 122
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYV 473
++TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ + +
Sbjct: 189 AKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSI 248
Query: 474 RNTCVFGGAPK 506
TCV+GG PK
Sbjct: 249 MTTCVYGGTPK 259
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +2
Query: 14 RPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFP 193
R DWD+V NFY P RS E+ + ++ +T+ G V P+ F + P
Sbjct: 97 RIDWDAVQKVATQWNFYKPQKP---RSEEEIATWLRENSITIYGDRVPQPMLEFSDLVAP 153
Query: 194 DYVQQGVKTMGYKEPTPIQA 253
D + Q G+++PTPIQ+
Sbjct: 154 DAIHQAFMDAGFQKPTPIQS 173
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/68 (61%), Positives = 50/68 (73%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G S VR
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGEASGVRCV 131
Query: 483 CVFGGAPK 506
CV+GGAPK
Sbjct: 132 CVYGGAPK 139
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +2
Query: 11 RRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANF 190
R+ WD L F KNFY H V + S +EVEEYR K E+T+ G PI F +A+F
Sbjct: 34 RKKRWDLDELPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHF 93
Query: 191 PDYVQQGVKTMGYKEPTPIQAQ 256
P YV + +KEPTPIQAQ
Sbjct: 94 PQYVMDVLMQQNFKEPTPIQAQ 115
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 82.6 bits (195), Expect = 7e-15
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F +
Sbjct: 361 AKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNIS 420
Query: 477 NTCVFGGAPKRSK 515
+ C FGG+ S+
Sbjct: 421 SCCCFGGSSIESQ 433
Score = 42.3 bits (95), Expect = 0.009
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D + + PF K+FY +LK EV R K + + V GV PI + + P
Sbjct: 266 DHNQIQYHPFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPS 325
Query: 197 YVQQGVK-TMGYKEPTPIQAQA 259
+ ++ + Y P+ IQAQA
Sbjct: 326 TIMSIIEGRLNYSSPSSIQAQA 347
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++ V
Sbjct: 146 AKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKV-IPGDVY 204
Query: 477 NTCVFGGAPKRSKPGTWRR 533
CV+GGAPK + G RR
Sbjct: 205 CGCVYGGAPKGPQLGLLRR 223
Score = 37.5 bits (83), Expect = 0.25
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Frame = +2
Query: 2 GTRRRP-DWDSVSLQPFNKNFYDPH------------PTVLKRSPYEVEEYRNKHEVTVS 142
G R +P DW +VSL P N D P + S E ++R +H +T+
Sbjct: 32 GERIKPVDWGNVSLVPGNWKVLDGKAIKKAGEIKTSTPEAGQLSEEEATKWREEHVITIF 91
Query: 143 GVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQA 259
G + P+ F+ P Y+ + + + PTP+QAQ+
Sbjct: 92 GDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQS 132
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 79.0 bits (186), Expect = 8e-14
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYV 473
++TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F + +
Sbjct: 162 AETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESL 221
Query: 474 RNTCVFGG 497
+N V GG
Sbjct: 222 KNCIVVGG 229
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 79.0 bits (186), Expect = 8e-14
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 150 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIH 209
Query: 477 NTCVFGGAPK 506
VFGG K
Sbjct: 210 VVAVFGGGNK 219
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +2
Query: 14 RPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFP 193
R D + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F
Sbjct: 55 RVDHSEIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFD 114
Query: 194 DYVQQGVKTMGYKEPTPIQAQA 259
+ + ++ + Y +PT IQ QA
Sbjct: 115 EQMMASIRKLEYTQPTQIQCQA 136
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 79.0 bits (186), Expect = 8e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F +R
Sbjct: 641 AKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLR 700
Query: 477 NTCVFGGAPKRSKPGTWRR 533
C +GGAP R + +R
Sbjct: 701 AVCAYGGAPIREQIAELKR 719
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D+ + ++P KNF+ + + EV + R + + + V+G +V P+Q + +
Sbjct: 547 DYSKIEIEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTR 606
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
V +GY++PTPIQ QA
Sbjct: 607 QTLDVVDNLGYEKPTPIQMQA 627
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG +S +
Sbjct: 194 AKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFGRSSRIS 252
Query: 477 NTCVFGGAPK 506
+TC++GGAPK
Sbjct: 253 STCLYGGAPK 262
Score = 59.3 bits (137), Expect = 7e-08
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQAG--R*LCLE 280
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ+ C +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 281 RI*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWT 460
+ +A G + +G +L H + R L + ++ +F
Sbjct: 190 VVAIA-KTGSGKTLG-YLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
Query: 461 HILCS*HVCVWWCS*K-EQARDLEKGVXIVIATPGSL 568
S C++ + K Q RDL++GV +V+ATPG L
Sbjct: 248 SSRIS-STCLYGGAPKGPQLRDLDRGVDVVVATPGRL 283
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F +
Sbjct: 115 AQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSEAYNMN 171
Query: 477 NTCVFGGAPKR 509
+ C++GGA KR
Sbjct: 172 SACIYGGADKR 182
Score = 41.9 bits (94), Expect = 0.012
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV--SGVEVHNPIQYFEEANFPDYVQ 205
++ P K F DP + + V EY ++H + V + ++V P +++ FP+ +
Sbjct: 26 INSTPIQKVFIDPTQRIYE--DIVVSEYLDEHSIVVEQNDIQVPQPFIEWKDCQFPNQLN 83
Query: 206 QGVKTMGYKEPTPIQA 253
+ + Y PTPIQA
Sbjct: 84 KRISLKAYNRPTPIQA 99
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 78.2 bits (184), Expect = 1e-13
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +R
Sbjct: 573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIR 632
Query: 477 NTCVFGGA 500
V+GG+
Sbjct: 633 CVPVYGGS 640
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + +PF KNFY + + + EV YR + E+ V G +V PI+++ +
Sbjct: 480 DHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSK 539
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K + Y++P PIQ QA
Sbjct: 540 ILDTMKKLNYEKPMPIQTQA 559
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 477 NTCVFGGAPK 506
C +GG K
Sbjct: 369 PICAYGGGSK 378
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ + ++ Y++PTPIQA A
Sbjct: 276 LMEAIRKSEYEQPTPIQAMA 295
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A + +R
Sbjct: 713 AETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLR 772
Query: 477 NTCVFGGAPKRSKPGTWRR 533
V+GG+ ++ T +R
Sbjct: 773 ILAVYGGSNIGTQLNTLKR 791
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 374 AKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFN 433
Query: 477 NTCVFGGAPKRSKPGTWRR 533
V+GG+ ++ G +R
Sbjct: 434 AVSVYGGSGIAAQIGELKR 452
Score = 38.3 bits (85), Expect = 0.14
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYV 202
D + +P K+FY + + + R + + + G +V PI+ + A +
Sbjct: 282 DEIDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRI 341
Query: 203 QQGVKTMGYKEPTPIQAQA 259
+ ++ G+++P PIQAQA
Sbjct: 342 HELIRRCGFEKPMPIQAQA 360
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 77.0 bits (181), Expect = 3e-13
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F +R
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIR 521
Query: 477 NTCVFGGAPKRSKPGTWRR 533
C +GGAP + + +R
Sbjct: 522 ACCAYGGAPIKDQIADLKR 540
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D ++ + F K+FY + SP EV+E R + + + G++ P+ + +
Sbjct: 368 DHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSA 427
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+ ++GY++PT IQAQA
Sbjct: 428 QTISVINSLGYEKPTSIQAQA 448
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 76.6 bits (180), Expect = 4e-13
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIR 243
Query: 477 NTCVFGGAPKRSKPGTWRR 533
+ VFGG ++ G +R
Sbjct: 244 SVAVFGGTGISNQIGALKR 262
Score = 39.5 bits (88), Expect = 0.062
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRN--KHEVTVSGVEVHNPIQYFEEANFP 193
D ++ +P +K Y P + K EV+E R V G PI+ + E
Sbjct: 89 DHKNIQYEPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGIN 148
Query: 194 DYVQQGVKTMGYKEPTPIQAQA 259
+K + Y++P+P+Q QA
Sbjct: 149 PITMDVIKALKYEKPSPVQRQA 170
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 76.6 bits (180), Expect = 4e-13
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFNRAGVPARC 208
Query: 483 C-VFGGAPKRSK 515
C +FGGA K +
Sbjct: 209 CAIFGGASKHEQ 220
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 76.6 bits (180), Expect = 4e-13
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP + HI +QPP+ GDGPI L++APTREL QQI F +
Sbjct: 528 AKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGIS 587
Query: 477 NTCVFGGA 500
V+GG+
Sbjct: 588 CVPVYGGS 595
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + +PF KNFY + +P E+ YR + E+ + G +V P++ + +
Sbjct: 435 DHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTK 494
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K + Y+ P PIQAQA
Sbjct: 495 ILDTIKKLNYERPMPIQAQA 514
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLK 407
Query: 477 NTCVFGG 497
C +GG
Sbjct: 408 VACTYGG 414
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 254 DHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNL 313
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+ +K Y +PT IQAQA
Sbjct: 314 KMMNVLKKFEYSKPTSIQAQA 334
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++F ++TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI F
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFT 601
Query: 459 HTSYVRNTCVFGGA 500
+ C GGA
Sbjct: 602 SILNLNVVCCVGGA 615
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQYFEEANFPD 196
D ++ QPF K+FY +++ +P E ++ R + ++ V G +V PIQ + + D
Sbjct: 453 DHSTIDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLND 512
Query: 197 YVQQG-VKTMGYKEPTPIQAQA 259
V ++ + P PIQAQA
Sbjct: 513 RVLNVLIEKKKFINPFPIQAQA 534
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F +
Sbjct: 129 AKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYK 188
Query: 477 NTCVFGG 497
+ C++GG
Sbjct: 189 HVCIYGG 195
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 101 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQA 253
E ++Y K+++ + G + FEE N P + + +K + PTPIQ+
Sbjct: 63 EQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQS 113
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F +
Sbjct: 440 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGII 499
Query: 477 NTCVFGGA 500
V+GG+
Sbjct: 500 CVPVYGGS 507
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + +PF KNFY + + + V YR + E+ V G +V PIQ++ +
Sbjct: 347 DHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSK 406
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K + Y++P PIQAQA
Sbjct: 407 ILDTLKKLNYEKPMPIQAQA 426
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F +R
Sbjct: 272 AKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLR 331
Query: 477 NTCVFGGAPKRSK 515
+ V+GG K +
Sbjct: 332 VSAVYGGMSKHEQ 344
Score = 67.3 bits (157), Expect = 3e-10
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D S+ +P NK+FY+ ++ + E +YR + + VSG +VH P++ FE+ F
Sbjct: 179 DHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQ 238
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K Y++PT IQ QA
Sbjct: 239 IMSAIKKQAYEKPTAIQCQA 258
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 751 AETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYE 810
Query: 477 NTCVFGG 497
VFGG
Sbjct: 811 IVAVFGG 817
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPD 196
D++ L+ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D
Sbjct: 645 DYNEDELEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSD 704
Query: 197 YVQQG-VKTMGYKEPTPIQAQA 259
+ + ++ Y +P PIQ Q+
Sbjct: 705 RILEVLIEKKKYDKPFPIQCQS 726
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG +S +
Sbjct: 275 AKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFGRSSRIS 333
Query: 477 NTCVFGGAPK 506
+ C++GGAPK
Sbjct: 334 SVCLYGGAPK 343
Score = 33.1 bits (72), Expect = 5.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 214
E YR KHE+T+ G E P F+ FP + + V
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREV 195
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSY 470
++TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F S
Sbjct: 99 AKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSG 158
Query: 471 VRNTCVFGGAPKRSK 515
R +FGG KR +
Sbjct: 159 ARCCAIFGGVSKRDQ 173
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
S+TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A + +
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIE 242
Query: 477 NTCVFGGAPKRSK 515
++GGAP+RS+
Sbjct: 243 IATIYGGAPRRSQ 255
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG +S +
Sbjct: 479 AKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFGRSSRIS 537
Query: 477 NTCVFGGAPK 506
TC++GGAPK
Sbjct: 538 CTCLYGGAPK 547
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 50 NKNFYDPH----PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 217
NK+ PH P V SP E+ YR +HEVT +G + P FE + P + + +
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELL 451
Query: 218 TMGYKEPTPIQAQ 256
+ G+ PTPIQAQ
Sbjct: 452 SAGFPSPTPIQAQ 464
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 161 AKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFS 220
Query: 477 NTCVFGGAPKRSKPGTWRR 533
V+GG+ ++ G +R
Sbjct: 221 AVSVYGGSGIAAQIGDLKR 239
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYV 202
D + +P KNFY + + EV++ R + + + G +V PI+ + +A + V
Sbjct: 69 DEIDYEPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRV 128
Query: 203 QQGVKTMGYKEPTPIQAQA 259
+ ++ G+++P PIQAQA
Sbjct: 129 HELIRRSGFEKPMPIQAQA 147
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSY 470
+QTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A +
Sbjct: 150 AQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG- 207
Query: 471 VRNTCVFGGAPKRSK 515
++ C++GG +R++
Sbjct: 208 IKAVCLYGGGDRRAQ 222
Score = 38.3 bits (85), Expect = 0.14
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 44 PFNKNFYDPHPTVLKRSPYEVEEYRN-KHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGV 214
P K FY+ V P +V +R + + + NP+ F +A +PD +++ +
Sbjct: 63 PLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-L 121
Query: 215 KTMGYKEPTPIQAQA 259
+ + PTPIQAQA
Sbjct: 122 RKQKFTTPTPIQAQA 136
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F + +R
Sbjct: 554 AKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLR 613
Query: 477 NTCVFGG 497
CV+GG
Sbjct: 614 PVCVYGG 620
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D SV+ PF KNFY P + + + +VE+YR+ E + V G PI+ + +
Sbjct: 460 DHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSK 519
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+ ++ +G+++PTPIQ QA
Sbjct: 520 KEMEVLRRLGFEKPTPIQCQA 540
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 73.3 bits (172), Expect = 4e-12
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F +R
Sbjct: 598 AKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLR 657
Query: 477 NTCVFGGA 500
C +GGA
Sbjct: 658 AVCAYGGA 665
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
++ ++ L PF KNFY + + + E+ + R + + + V+G +V P+Q + +
Sbjct: 504 NYSALDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDV 563
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+ +GY+ PT IQ QA
Sbjct: 564 KSLDVITKLGYERPTSIQMQA 584
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 72.9 bits (171), Expect = 5e-12
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F +R
Sbjct: 520 AKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLR 579
Query: 477 NTCVFGGAP 503
CV+GGAP
Sbjct: 580 AACVYGGAP 588
Score = 49.2 bits (112), Expect = 8e-05
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D ++ +PFNK FY P + S + R + + +TV G + P+ + P
Sbjct: 426 DHSAIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPA 485
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+K +GY PTPIQ+QA
Sbjct: 486 SCLDVIKRLGYSAPTPIQSQA 506
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 72.9 bits (171), Expect = 5e-12
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG +R
Sbjct: 297 AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLR 356
Query: 477 NTCVFGG 497
+ V+GG
Sbjct: 357 SVAVYGG 363
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + PF KNFY+ H + +P ++ + R+K + VSG P F F +
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 200 VQQGVKTMGYKEPTPIQAQ 256
+ ++ Y +PTPIQ Q
Sbjct: 264 LMHQIRKSEYTQPTPIQCQ 282
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 72.5 bits (170), Expect = 7e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F ++
Sbjct: 412 AETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLK 471
Query: 477 NTCVFGGA 500
++GGA
Sbjct: 472 TLAIYGGA 479
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 14 RPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVEVHNPIQYFEEANF 190
R D + PF KNFY ++ +EV+ +R + + V G + PI F +
Sbjct: 316 RVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCGL 375
Query: 191 PDYVQQGVKTMGYKEPTPIQAQ 256
PD + + ++ Y+ P PIQ Q
Sbjct: 376 PDPILKILEKREYERPFPIQMQ 397
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 72.5 bits (170), Expect = 7e-12
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++ +R
Sbjct: 432 AETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIR 491
Query: 477 NTCVFGGAP 503
V+GG+P
Sbjct: 492 TKAVYGGSP 500
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVEVHNPIQYFEEANFPD 196
D ++ QPF KNFY + +EVE +R + + V G PI F + PD
Sbjct: 338 DHSTIDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPD 397
Query: 197 YVQQGVKTMGYKEPTPIQAQ 256
+ ++ Y++P PIQ Q
Sbjct: 398 PILSLLQRRNYEKPFPIQMQ 417
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ + + Y
Sbjct: 119 AQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY- 177
Query: 474 RNTCVFGGAPKRSK 515
++ CV+GG ++++
Sbjct: 178 KSVCVYGGGDRKAQ 191
Score = 37.1 bits (82), Expect = 0.33
Identities = 54/192 (28%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE---VTVSGVE-------VHNPIQYFEEAN 187
L P K FY ++ P EV ++R E + V ++ + P + F EA
Sbjct: 21 LPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCRTFLEA- 79
Query: 188 FPDY--VQQGVKTMGYKEPTPIQAQAGR*LCLERI*LA*PNGFRQNVGLHLASNCAHK-- 355
F Y + VK G+ PTPIQ+QA L +A +L H
Sbjct: 80 FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIAIAQTGTGKTLAYLLPGFIHMNG 139
Query: 356 *PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHILCS*HVCVW-WCS*KEQARDLEK 532
P ER L + ++ A C ++ S VCV+ K Q +E+
Sbjct: 140 QPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDYKS--VCVYGGGDRKAQIHKVER 197
Query: 533 GVXIVIATPGSL 568
GV IVIATPG L
Sbjct: 198 GVDIVIATPGRL 209
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
SQTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A + +R
Sbjct: 363 SQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYSRLLNLR 421
Query: 477 NTCVFGGAPK 506
++GGA K
Sbjct: 422 LVPIYGGASK 431
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVE-VHNPIQYFEEANFPD 196
DWD L K+FYD R E+E H + + G + P+ F+EA F
Sbjct: 269 DWDKEELVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQ 328
Query: 197 YVQQGVKTMGYKEPTPIQ 250
+Q +K + EPTPIQ
Sbjct: 329 QIQNIIKESNFTEPTPIQ 346
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F T ++
Sbjct: 432 AKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLK 491
Query: 477 NTCVFGGA 500
C +GG+
Sbjct: 492 VCCCYGGS 499
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+ QI F + S +
Sbjct: 553 AKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGIT 612
Query: 477 NTCVFGGAP 503
C +GG P
Sbjct: 613 IKCAYGGQP 621
Score = 38.7 bits (86), Expect = 0.11
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYV 202
+ V +PF K+FY + + S +V + R++ + + V +V P+ + +
Sbjct: 461 EKVEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQT 520
Query: 203 QQGVKTMGYKEPTPIQAQA 259
+GY PT IQAQA
Sbjct: 521 MDVFTRVGYARPTAIQAQA 539
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F +R
Sbjct: 553 ARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLR 612
Query: 477 NTCVFGGA 500
CV+GGA
Sbjct: 613 TACVYGGA 620
Score = 50.4 bits (115), Expect = 3e-05
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D S+ F KNFY P + + EV ++R++ V ++G + PIQ + +A +
Sbjct: 460 DHTSIKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEK 519
Query: 200 VQQGVKTMGYKEPTPIQAQ 256
V +K Y++PT IQAQ
Sbjct: 520 VHLLLKKFQYEKPTSIQAQ 538
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG +S +
Sbjct: 205 AKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKSSKIS 263
Query: 477 NTCVFGGAPK 506
C++GGAPK
Sbjct: 264 CACLYGGAPK 273
Score = 53.2 bits (122), Expect = 5e-06
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQAGR*LCLER- 283
E Y KHE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ+ R
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRD 200
Query: 284 I*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFW-- 457
I G + +G +L H R L + ++ +F
Sbjct: 201 IVAIAKTGSGKTLG-YLIPGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKS 259
Query: 458 THILCS*HVCVWWCS*K-EQARDLEKGVXIVIATPGSL 568
+ I C+ C++ + K Q +++E+GV IV+ATPG L
Sbjct: 260 SKISCA---CLYGGAPKGPQLKEIERGVDIVVATPGRL 294
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F +R
Sbjct: 447 AKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIR 506
Query: 477 NTCVFGGA 500
+C GG+
Sbjct: 507 ASCCVGGS 514
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 69.7 bits (163), Expect = 5e-11
Identities = 29/71 (40%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++ + +
Sbjct: 285 AQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-L 343
Query: 474 RNTCVFGGAPK 506
++ C++GG +
Sbjct: 344 KSVCIYGGGDR 354
Score = 41.1 bits (92), Expect = 0.020
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVE------VHNPIQYFEEAN--F 190
L P KNFY S +V+ +R + + + ++ + NP FE+A +
Sbjct: 190 LPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAFHCY 249
Query: 191 PDYVQQGVKTMGYKEPTPIQAQAGR*LCLERI*L--A*PNGFRQNVGLHLASNCAH--K* 358
P+ V + ++ G+++PTPIQ+QA + L+ I L G + + +L H
Sbjct: 250 PE-VMRNIEKAGFQKPTPIQSQAWP-IILQGIDLIGVAQTGTGKTLS-YLMPGFIHIDSQ 306
Query: 359 PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHILCS*HVCVWWCS*KE-QARDLEKG 535
P R L + ++ A C + L S VC++ ++ Q +DL KG
Sbjct: 307 PVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRGLKS--VCIYGGGDRDGQIKDLSKG 364
Query: 536 VXIVIATPGSL 568
I+IATPG L
Sbjct: 365 ADIIIATPGRL 375
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 68.9 bits (161), Expect = 9e-11
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A + +
Sbjct: 767 AETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIE 826
Query: 477 NTCVFGGA 500
V+GG+
Sbjct: 827 ILAVYGGS 834
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F + ++
Sbjct: 197 AETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFTKGTAIK 256
Query: 477 NTCVFGGAPKRSK 515
FGG P+ S+
Sbjct: 257 TVRCFGGVPQSSQ 269
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/78 (39%), Positives = 42/78 (53%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
++D +L PF KNFY P R EV Y ++E+ V+G E + FEE NFP
Sbjct: 104 NYDITTLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQS 163
Query: 200 VQQGVKTMGYKEPTPIQA 253
+ +K Y +PTPIQA
Sbjct: 164 ILDVIKEQNYIKPTPIQA 181
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTS 467
+QTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++ +
Sbjct: 367 AQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFRD 425
Query: 468 YVRNTCVFGGAPKRSK 515
++ C++GG +R++
Sbjct: 426 -IKAICLYGGGDRRTQ 440
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Frame = +2
Query: 53 KNFYDPHPTVLKRSPYEVEEYR-NKHEVTVS---------GVEVHNPIQYFEEA--NFPD 196
KNFY+ P V +P EV E+R + + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+++ +K G+ +P+PIQAQA
Sbjct: 334 LLEE-IKKQGFAKPSPIQAQA 353
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++ F H
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL 416
Query: 468 YVRNTCVFGG 497
R T + GG
Sbjct: 417 GFRVTSIVGG 426
Score = 35.5 bits (78), Expect = 1.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R ++ G + P++ +EE+ + + V+ GYK+P+PIQ A
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAA 343
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++ + + + +
Sbjct: 349 AQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-L 407
Query: 474 RNTCVFGGAPKRSK 515
++ CV+GG ++ +
Sbjct: 408 KSVCVYGGGNRKEQ 421
Score = 49.2 bits (112), Expect = 8e-05
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVE------VHNPIQYFEEA--NF 190
L P KNFY S +V+ +R ++ +T ++ + NP FE+A ++
Sbjct: 254 LPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIPNPTCKFEDAFEHY 313
Query: 191 PDYVQQGVKTMGYKEPTPIQAQAGR*LC--LERI*LA*PNGFRQNVGLHLASNCAH--K* 358
P+ V + +K G++ PTPIQ+QA + ++ I +A G + + +L H
Sbjct: 314 PE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVA-QTGTGKTLS-YLIPGFIHLDSQ 370
Query: 359 PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHILCS*HVCVW-WCS*KEQARDLEKG 535
P + ER L + ++ A C ++ L S VCV+ + KEQ + + KG
Sbjct: 371 PISREERNGPGMLVLTPTRELALQVEAECSKYSYKGLKS--VCVYGGGNRKEQIQHITKG 428
Query: 536 VXIVIATPGSL 568
V I+IATPG L
Sbjct: 429 VDIIIATPGRL 439
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHT 464
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 465 SYVRNTCVFGGAPKRSK 515
++ V GGA + +
Sbjct: 405 LGIKTVSVIGGASREDQ 421
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ QA
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ + + R
Sbjct: 476 AETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----QYELFTR 527
Query: 477 NTCVFGGAPK 506
CV+GG K
Sbjct: 528 TCCVYGGVFK 537
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ 431
RSQTGSGKTL+Y +P + + QP + RGDGP+AL+L PTRELAQQ
Sbjct: 123 RSQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLALILVPTRELAQQ 169
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 66.1 bits (154), Expect = 6e-10
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVAADFGHT 464
++TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++ FG
Sbjct: 435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 465 SYVRNTCVFGGAPKRSK 515
+R V GG + +
Sbjct: 495 LGIRTVAVIGGISREDQ 511
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R + +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ QA
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA 421
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 65.7 bits (153), Expect = 8e-10
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D S+ + F KNFY HP + K + +VE+ R + E+ VSGV PI F F +
Sbjct: 13 DHSSIKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEE 72
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ + + +G+++PT IQ QA
Sbjct: 73 LMRQITKLGFEKPTQIQCQA 92
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + + +
Sbjct: 106 AKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNIS 165
Query: 477 NTCVFGGAPKRSK 515
+ GG K +
Sbjct: 166 VGALLGGENKHEQ 178
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 65.7 bits (153), Expect = 8e-10
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQIQQVAAD 452
+QTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI + A
Sbjct: 175 AQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVR 234
Query: 453 FGHTSYVRNTCVFGGA 500
F + +R+ CV+GG+
Sbjct: 235 FTEDTPIRSVCVYGGS 250
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 65.7 bits (153), Expect = 8e-10
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y LP I H +QP +G+GPI LVL PT+ELA Q+ + + G + +R
Sbjct: 91 AKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTLLDELGEAARLR 150
Query: 477 NTCVFG 494
+G
Sbjct: 151 CVASYG 156
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 458
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 459 HTSYVRNTCVFGGAPK 506
+ Y ++ C++GG +
Sbjct: 188 YNGY-KSVCLYGGGSR 202
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/68 (39%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ + ++
Sbjct: 613 AETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYCKAVDLK 672
Query: 477 NTCVFGGA 500
V+GG+
Sbjct: 673 ILAVYGGS 680
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFG 458
+QTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI A F
Sbjct: 201 AQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFT 260
Query: 459 HTSYVRNTCVFGGAPKR 509
+ + VR V+GGA R
Sbjct: 261 YHTPVRCVVVYGGADPR 277
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A+++P +++I+ QP + + DGP ALV+APTREL QQI++ +F
Sbjct: 457 AETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHF 516
Query: 468 YVRNTCVFGG 497
R + GG
Sbjct: 517 GFRVVSLVGG 526
Score = 41.1 bits (92), Expect = 0.020
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
++ ++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q+
Sbjct: 395 FKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQS 443
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 479
TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V + +R
Sbjct: 156 TGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQ 215
Query: 480 TCVFGGAPK 506
C +GG K
Sbjct: 216 LCAYGGLGK 224
Score = 36.7 bits (81), Expect = 0.43
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 110 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
E+R KH V + G NP Q F + FP Q + G+ PT IQ Q+
Sbjct: 93 EWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQS 140
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYV 473
S+TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI + +
Sbjct: 296 SKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDI 355
Query: 474 RNTCVFGGA 500
+ C GG+
Sbjct: 356 SSICCTGGS 364
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 63.7 bits (148), Expect = 3e-09
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ + +
Sbjct: 232 AKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQIS 291
Query: 477 NTCVFGGAPK 506
+ + GG K
Sbjct: 292 VSALLGGENK 301
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ F
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPL 352
Query: 468 YVRNTCVFGG 497
R V GG
Sbjct: 353 GFRCVSVVGG 362
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 116 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+ + +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ A
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAA 279
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 62.9 bits (146), Expect = 6e-09
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
++QTGSGKTLAY+LP I I N P ++R DG L+L PTREL QQ+ V TS
Sbjct: 51 KAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTIL-TTSI 109
Query: 471 VR--NTCVFGGAPKRSKPGTWRR 533
+ + V GG K+S+ R+
Sbjct: 110 IGLVPSIVVGGDSKKSEKARIRK 132
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 473
S TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRF 103
Query: 474 RNTCVFGGAP 503
R C+ GGAP
Sbjct: 104 RTACLVGGAP 113
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHT-SY 470
S+TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F +
Sbjct: 300 SKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTS 359
Query: 471 VRNTCVFGGAPKRSK 515
+R+ C GG+ + +
Sbjct: 360 IRSVCCTGGSEMKKQ 374
Score = 37.9 bits (84), Expect = 0.19
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANF-PDYVQQG 211
L+PF KNFY TV S EVEE R + + + G P+ + + D +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 212 VKTMGYKEPTPIQAQA 259
+ + + TPIQ+QA
Sbjct: 271 TEKLHFGSLTPIQSQA 286
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F S +
Sbjct: 178 AQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSVGSQLY 234
Query: 477 NTCVFGG 497
C++GG
Sbjct: 235 AACLYGG 241
Score = 37.1 bits (82), Expect = 0.33
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 104 VEEYRNKHEVTVSG--VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQ 256
++EYR +H + + V V +PI FE+ FP + + G+K PT IQAQ
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQ 163
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+QTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+ F
Sbjct: 138 AQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFTQ 197
Query: 462 TSYVRNTCVFGGAPKR 509
++ C++GG R
Sbjct: 198 NYRLKTLCIYGGINNR 213
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +3
Query: 258 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 437
L DS ++ R +TGSGKT A++LP + ++ R+ P AL+LAPTRELA QI
Sbjct: 49 LPDSLAGRDVLGRGRTGSGKTYAFLLPMLARLSAGGTRRQAKRPRALILAPTRELAIQID 108
Query: 438 QVAADFGHTSYVRNTCVFGG 497
+ A + + VFGG
Sbjct: 109 EALAPLAQPLGITSKTVFGG 128
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHT 464
++TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V + G
Sbjct: 158 AKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEP 217
Query: 465 SYVRNTCVFGGAPK 506
+++ CV+GG+ K
Sbjct: 218 CGLKSICVYGGSSK 231
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 276 WKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
WK+ ++ TG+GKT A+ +P + HI+ + D ALVLAPTRELA QIQ D
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELALQIQDELRDL 103
Query: 456 -GHTSYVRNTCVFGGAP 503
VR+ C++GGAP
Sbjct: 104 CEFKEGVRSVCLYGGAP 120
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +3
Query: 258 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 437
L DS ++ R +TGSGKT A++LP + + + P ALVLAPTREL QI+
Sbjct: 39 LPDSLAGRDVLGRGRTGSGKTYAFLLPLVARLTASGRPAQARKPRALVLAPTRELVNQIE 98
Query: 438 QVAADFGHTSYVRNTCVFGGAPKRSKPGTWRR 533
+ T+ + VFGG + + RR
Sbjct: 99 EALKPLARTAGLTTQTVFGGVGQNPQVQGLRR 130
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Frame = +3
Query: 276 WKEFSWRSQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 440
+++F + TGSGKTLA+++P ++ ++ PP ++ DGP AL+LAPTREL QQIQ+
Sbjct: 214 YRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+ A F +
Sbjct: 423 TGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPL 482
Query: 468 YVRNTCVFGG 497
+ GG
Sbjct: 483 GFNVVSIVGG 492
Score = 35.5 bits (78), Expect = 1.0
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
++ ++ G + NP++ + E+ P + + + +GYK+P+PIQ A
Sbjct: 359 FKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAA 407
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ + + +
Sbjct: 286 AQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-L 344
Query: 474 RNTCVFGG 497
R+ CV+GG
Sbjct: 345 RSVCVYGG 352
Score = 49.2 bits (112), Expect = 8e-05
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVE------VHNPIQYFEEAN--F 190
L P KNFY S E + +R ++ +T ++ + NP F++A +
Sbjct: 191 LPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCY 250
Query: 191 PDYVQQGVKTMGYKEPTPIQAQAGR*LCLERI*L--A*PNGFRQNVGLHLASNCAH--K* 358
P+ V + +K G+++PTPIQ+QA + L+ I L G + + +L H
Sbjct: 251 PE-VMENIKKAGFQKPTPIQSQAWP-IVLQGIDLIGVAQTGTGKTL-CYLMPGFIHLVLQ 307
Query: 359 PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHILCS*HVCVWWCS*K-EQARDLEKG 535
P+ +R L + ++ CC++ L S VCV+ + EQ +L+KG
Sbjct: 308 PSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRS--VCVYGGGNRDEQIEELKKG 365
Query: 536 VXIVIATPGSL 568
V I+IATPG L
Sbjct: 366 VDIIIATPGRL 376
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQIQQVAAD 452
++TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ + +
Sbjct: 217 AETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSA 276
Query: 453 FGHTSYVRNTCVFGGAPK 506
FG +++ C+FGG K
Sbjct: 277 FGEQVGLKSVCIFGGVGK 294
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 449
++F + TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 450 DFGHTSYVRNTCVFGGAPK 506
+ G + + C++GG K
Sbjct: 189 EAGAPCGISSVCLYGGTSK 207
>UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Rep:
AFR452Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 287
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADF 455
TGSGKTLA++LP + P+ R DGP ALVLAPTRELAQQI+ A F
Sbjct: 203 TGSGKTLAFLLPIFAKLGRMAPLNAVTRQDGPRALVLAPTRELAQQIEAQARQF 256
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF-GHTSY 470
S+TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F
Sbjct: 321 SKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRS 380
Query: 471 VRNTCVFGGAPKRSKPGTWRR 533
+R C GG+ + + +R
Sbjct: 381 IRTICCTGGSEMKKQINDLKR 401
Score = 37.1 bits (82), Expect = 0.33
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFP-DYVQQG 211
L+PF K+FY V + EVEE R + + V G I + + P D +
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNLI 291
Query: 212 VKTMGYKEPTPIQAQA 259
K + Y EPT IQ+QA
Sbjct: 292 TKELKYDEPTAIQSQA 307
Score = 34.3 bits (75), Expect = 2.3
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 506 KEQARDLEKGVXIVIATPGSLIGFL 580
K+Q DL++GV IV+ATPG LI L
Sbjct: 393 KKQINDLKRGVEIVVATPGRLIDIL 417
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
S+TGSGKT A++LP + +I PP+ + +GP AL+LAPTRELA QIQ F
Sbjct: 301 SKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATRM 360
Query: 468 YVRNTCVFG 494
C+ G
Sbjct: 361 GFTVVCLIG 369
Score = 47.2 bits (107), Expect = 3e-04
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 128 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
E+ G + NP++++EE+N P ++ +K +GY EPTP+Q A
Sbjct: 244 EIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAA 287
>UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 742
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 282 EFSWRSQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFG 458
+F +QTGSGKTL+Y+LP I I N + R G ALV+APTRELA QI V +
Sbjct: 186 DFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTLV 245
Query: 459 HTSYVRNTC-VFGGAPKRSKPGTWRR 533
+ C + GG K+S+ R+
Sbjct: 246 SCCHYLVPCLLIGGERKKSEKARLRK 271
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 59.7 bits (138), Expect = 5e-08
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ RS+TGSGKT AY+LP + N +G A+++ PTRELA Q +VA+ G
Sbjct: 34 KDVIIRSKTGSGKTAAYLLPVL----NSVEKLKGKSVKAIIILPTRELALQTHRVASRLG 89
Query: 459 HTSYVRNTCVFGGA 500
S +++T V+GGA
Sbjct: 90 KISGIKSTIVYGGA 103
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADF 455
K+ RSQTGSGKTLAY LP + + Q P I+R DG +ALV+ PTREL Q ++
Sbjct: 366 KDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKL 425
Query: 456 GHT-SYVRNTCVFGGAPKRSKPGTWRR 533
+++ + GG ++S+ R+
Sbjct: 426 VKPYTWIVPGSLLGGESRKSEKARLRK 452
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 59.7 bits (138), Expect = 5e-08
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKT + LP + H+ + P +G P+ AL+L PTRELA QI + D+ +
Sbjct: 45 AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNI 104
Query: 474 RNTCVFGG 497
R+ VFGG
Sbjct: 105 RSLVVFGG 112
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 59.7 bits (138), Expect = 5e-08
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADF 455
S TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++ F
Sbjct: 254 SATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKF 309
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 59.3 bits (137), Expect = 7e-08
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI + F
Sbjct: 742 AETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYC 801
Query: 468 YVRNTCVFGGAPKRSKPGTWRR 533
R V GG ++ RR
Sbjct: 802 SCRTVAVVGGRNAEAQAFELRR 823
Score = 41.1 bits (92), Expect = 0.020
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R +E+ + G V PI+ +EE+N + + + +K Y++PTPIQ QA
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQA 728
>UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX31;
n=30; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX31 - Homo sapiens (Human)
Length = 851
Score = 59.3 bits (137), Expect = 7e-08
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTS 467
RSQTGSGKTLAY +P + + + I+R DGP ALVL PTRELA Q V +
Sbjct: 274 RSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFT 333
Query: 468 YVRNTCVFGGAPKRSKPGTWRR 533
++ + GG ++S+ R+
Sbjct: 334 WIVPGVLMGGEKRKSEKARLRK 355
>UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH
helicase DDX31; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to DEAD/DEXH helicase DDX31 -
Strongylocentrotus purpuratus
Length = 690
Score = 58.8 bits (136), Expect = 9e-08
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTS 467
+SQTG+GKTLAY +P + + QP ++R GP AL+L PTRELA Q + +
Sbjct: 177 KSQTGTGKTLAYAVPVVQQLQGLQPKVQRLHGPYALILVPTRELACQSFETLVKLVKPFH 236
Query: 468 YVRNTCVFGGAPKRSKPGTWRR 533
++ + GG K+S+ G R+
Sbjct: 237 WIVPGVLMGGEKKKSEKGRIRK 258
>UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833;
n=1; Plasmodium yoelii yoelii|Rep: Drosophila
melanogaster BcDNA.GH02833 - Plasmodium yoelii yoelii
Length = 854
Score = 58.8 bits (136), Expect = 9e-08
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Frame = +3
Query: 162 LFNTLKKQIFLIMCNKV*RQWVTKNRRPFKLRLADSYVWKEFSWRSQTGSGKTLAYILPA 341
LF+ LK + + N + + K + KL + + +S TGSGKTL Y LPA
Sbjct: 149 LFSDLKNVLNESLLNTLEKNNFVKTTKIQKLSIPKIIKDNDVFLKSMTGSGKTLCYALPA 208
Query: 342 IVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAP 503
+ I N I R G LVL+PTRELA QI + + Y+ +C+ GG
Sbjct: 209 VQKILNLKEKNNIKITREMGTFILVLSPTRELAIQINNLLSILTKAYPYIVVSCIIGGEK 268
Query: 504 KRSKPGTWRR 533
K+S+ R+
Sbjct: 269 KKSEKNRIRK 278
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 58.8 bits (136), Expect = 9e-08
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI F
Sbjct: 385 TGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETVKFSAFCSC 444
Query: 474 RNTCVFGGAPKRSK 515
R+ V GG S+
Sbjct: 445 RSVAVVGGRNAESQ 458
Score = 39.1 bits (87), Expect = 0.081
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R E+ + G V PI+ + E+ P + + +K GY +PTPIQ QA
Sbjct: 321 FREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQA 369
>UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 767
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
+S+TGSGKTL Y++P I VH+ I R DG V+ PTREL Q ++VA
Sbjct: 252 KSETGSGKTLTYLVPIISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVAQLVTKK 311
Query: 465 S-YVRNTCVFGGA-PKRSK 515
S Y+ C+ GG PK+ K
Sbjct: 312 SKYLITGCLMGGENPKKEK 330
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTG+GKT A+ LP + + P GP LVL PTREL Q++ DFG + VR
Sbjct: 45 AQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDFGRFTDVR 100
Query: 477 NTCVFGG 497
+T + GG
Sbjct: 101 STIIHGG 107
Score = 32.7 bits (71), Expect = 7.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
F + P + +GV+ MGY +PTP+Q +A
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRA 31
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPI----RRGDG--PIALVLAPTRELAQQIQQ 440
K+ R++TG GKTLA++LP + + P+ RR G P+ +VLAPTRELA+Q+
Sbjct: 121 KDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVFA 180
Query: 441 VAADFGHTSYVRNTCVFGGAPKRSK 515
G++ ++ CV+GG P R +
Sbjct: 181 DFDWIGNSFGFKSVCVYGGTPYREQ 205
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ ++
Sbjct: 84 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCP 143
Query: 477 NTCVFGGAP 503
V GG P
Sbjct: 144 GNPVCGGVP 152
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 56 NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 235
++YD + V + S V+E R K+ + + G + PI+ F + N P + + ++
Sbjct: 3 SYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQV 62
Query: 236 PTPIQAQA 259
PTPIQ Q+
Sbjct: 63 PTPIQMQS 70
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TG+GKT AY++P I + P + GP ALVLAPTRELA QIQ+
Sbjct: 220 AETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPF 279
Query: 468 YVRNTCVFGGAP 503
+R C GG P
Sbjct: 280 GLRVCCCIGGEP 291
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +QTG+GKT A+ LP+I ++ P R G L+L+PTRELA QI + D+
Sbjct: 44 KDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYT 103
Query: 459 HTSYVRNTCVFGGAP 503
+ VFGG P
Sbjct: 104 RHLRMSVNAVFGGVP 118
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/89 (33%), Positives = 51/89 (57%)
Frame = +3
Query: 249 KLRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 428
K+ + +Y ++ ++TGSGKT +YI+PAI H+ Q +GP L++APT+ELAQ
Sbjct: 770 KIAIPIAYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQ 826
Query: 429 QIQQVAADFGHTSYVRNTCVFGGAPKRSK 515
QI+ A S ++ ++ +R +
Sbjct: 827 QIEIKANQLLENSPIKAVAIYASPNRREQ 855
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF--GHTS 467
S+TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI + F G S
Sbjct: 281 SKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDPS 340
Query: 468 YVRNTCVFGGA 500
+R+ C GG+
Sbjct: 341 -IRSLCCTGGS 350
Score = 37.5 bits (83), Expect = 0.25
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 214
L+PF KNFY + K S EV + R + V V G + PI + + + +
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLL 251
Query: 215 -KTMGYKEPTPIQAQA 259
+ + + PTPIQAQA
Sbjct: 252 TRELEFTVPTPIQAQA 267
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+++TG+GKTL+++LP +V Q P + G PI L LAPTRELA+QI + G ++
Sbjct: 145 QARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIG--PHL 201
Query: 474 RNTCVFGG 497
TC++GG
Sbjct: 202 STTCIYGG 209
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 57.6 bits (133), Expect = 2e-07
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +2
Query: 62 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 241
Y HP + + +P +V++ RN+ ++ V G+ + PI FE+ P + +++ GY PT
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQSSGYITPT 385
Query: 242 PIQAQA 259
PIQ QA
Sbjct: 386 PIQMQA 391
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVA 446
+QT SGKTL++++PA++ I NQ G P L+ PTRELA QI++ A
Sbjct: 405 AQTSSGKTLSFLVPAVMTIYNQVLTGVGSKDPHVLIFTPTRELAMQIEEQA 455
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +QTG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
Query: 459 HTSYVRNTCVFGGAPKRSK 515
+ T GGAP R +
Sbjct: 201 KRLPLNFTHAIGGAPIRKQ 219
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/82 (37%), Positives = 42/82 (51%)
Frame = +3
Query: 258 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 437
L D ++ R++TGSGKTL + LP + + Q R P LVL PTRELA Q+
Sbjct: 177 LPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVA 236
Query: 438 QVAADFGHTSYVRNTCVFGGAP 503
G + +R + V GG P
Sbjct: 237 DALRPLGDSLDLRLSVVVGGVP 258
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAADFGHTS 467
SQTG+GKT A+++P I ++ + PP+ DGP AL+L PTRELA QI++ +
Sbjct: 367 SQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKEFQNLTSNM 426
Query: 468 YVRNTCVFGG 497
+++ + GG
Sbjct: 427 RMKSLVMVGG 436
Score = 42.3 bits (95), Expect = 0.009
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
+R +++ + G V P++ +EE P Y+ V+ Y++PTPIQ Q
Sbjct: 305 FREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQ 352
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI F
Sbjct: 625 AETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYC 684
Query: 468 YVRNTCVFGG 497
R V GG
Sbjct: 685 SCRTVAVVGG 694
Score = 40.3 bits (90), Expect = 0.035
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R +E+ + G V PI+ +EE+N + + +K Y++PTPIQ QA
Sbjct: 563 FREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQA 611
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +3
Query: 252 LRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELA 425
L L + ++ + ++QTG+GKTLA+++ + + ++P + R + P AL+LAPTRELA
Sbjct: 38 LTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELA 97
Query: 426 QQIQQVAADFGHTSYVRNTCVFGG 497
QI A FG +R ++GG
Sbjct: 98 IQIYNDAVKFGGNLGLRFALIYGG 121
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q + ++++
Sbjct: 131 AQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHIS 190
Query: 477 NTCVFGGAPKRSK 515
V GG K S+
Sbjct: 191 TALVLGGVSKLSQ 203
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 455
++ + ++QTG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVL 222
Query: 456 GHTSYVRNTCVFGG 497
+ + + VFGG
Sbjct: 223 EIFTGLTSVVVFGG 236
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTS 467
SQTGSGKT ++LP + + Q P+ GP LVL PTRELAQQ+ Q A + T
Sbjct: 45 SQTGSGKTFGFLLPVMHRMMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTK 104
Query: 468 YVRNTCVFGGAP 503
VR V GG P
Sbjct: 105 GVRVATVVGGMP 116
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRELAQQIQ 437
+QTGSGKT A++LP + I + P RR PI+LVLAPTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 438 QVAADFGHTSYVRNTCVFGGA 500
+ A F + S VR V+GGA
Sbjct: 284 EEARKFSYRSRVRPCVVYGGA 304
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TG+GKTLA++LPA+ H+ + P + G I LVLAPTRELA+QI + A F + + +
Sbjct: 49 TGTGKTLAFLLPALQHLLDFPRQQPGPARI-LVLAPTRELAEQIHEQAKQFEAKTGLTSV 107
Query: 483 CVFGG 497
V GG
Sbjct: 108 VVTGG 112
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +3
Query: 252 LRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 431
L + + K+ +QTG+GKTLA++LP I ++ +P R G AL+L PTRELA Q
Sbjct: 31 LAIEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQ 87
Query: 432 IQQVAADFGHTSYVRNTCVFGGAPKRSK 515
I + + +R GG +RS+
Sbjct: 88 INEALLQIARGTGIRAAVAVGGLNERSQ 115
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ SQTG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ ++
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYA 98
Query: 459 HTSY--VRNTCVFGG 497
S ++ + GG
Sbjct: 99 EFSLRPIKTATLIGG 113
Score = 36.3 bits (80), Expect = 0.57
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
FE+ NFPDY+ + V + + E T IQA+A
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKA 31
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
+QTG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+ +
Sbjct: 327 AQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG- 384
Query: 471 VRNTCVFGG 497
++ CV+GG
Sbjct: 385 MKAVCVYGG 393
Score = 46.0 bits (104), Expect = 7e-04
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Frame = +2
Query: 44 PFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGV----------EVHNPIQYFEE--A 184
P KNFY P V + E+E R + +++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 185 NFPDYVQQGVKTMGYKEPTPIQAQA 259
+PD +++ + MG+ +P+PIQ+QA
Sbjct: 290 EYPDMLEE-ITKMGFSKPSPIQSQA 313
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S ++ ++GG
Sbjct: 243 TKFSYKSNIQTAILYGG 259
Score = 39.1 bits (87), Expect = 0.081
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
++Y N V VSG V I++F EA F V + V GY +PTP+Q
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQ 166
>UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 596
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF- 455
R+ TGSGKTLAY+LP + + + PIRR G +A+V+APTREL QI+ V D
Sbjct: 76 RADTGSGKTLAYLLPIMHRLATDFPRDTNPIRRDMGCLAIVIAPTRELCLQIETVVQDLR 135
Query: 456 GHTSYVRNTCVFGGAPKRSKPGTWRR 533
++V + + GG +S+ R+
Sbjct: 136 SQMNFVISGSLLGGEKVQSEKKRLRK 161
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A+++P + +I + PP+ R GP AL++APTRELAQQI+ F
Sbjct: 359 AKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPL 418
Query: 468 YVRNTCVFGG 497
+ + GG
Sbjct: 419 GYKCVSIVGG 428
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R + G + +P++ + E+ P + ++ +GYKEP+PIQ QA
Sbjct: 297 FREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQA 345
>UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP7 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 948
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
++QTGSGKTL+Y+LP + + ++ I R G +A++LAPTRELAQQI +V H
Sbjct: 262 QAQTGSGKTLSYLLPIVQTLLPLSRLSYIDRSIGTLAIILAPTRELAQQISKVLEQLLHM 321
Query: 465 SY 470
S+
Sbjct: 322 SF 323
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 56.4 bits (130), Expect = 5e-07
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + +I NN P P LV+ PTRELA QI + A F H+
Sbjct: 305 AQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHS 364
Query: 465 SYVRNTCVFGGA 500
S + +GGA
Sbjct: 365 SVAKCCVAYGGA 376
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+ + V+
Sbjct: 530 AQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEILTKNTSVK 586
Query: 477 NTCVFGGAPKR 509
+GG R
Sbjct: 587 VAVAYGGENNR 597
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
SQTGSGKT A++LP I + P + L PTRELA QI + F + ++
Sbjct: 165 SQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFCKGTDLK 221
Query: 477 NTCVFGGAP 503
TCVFGGAP
Sbjct: 222 TTCVFGGAP 230
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFL 580
EQ R+L +G+ IVIATPG LI L
Sbjct: 233 EQIRNLSRGIDIVIATPGRLIDIL 256
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
RS+TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G S +
Sbjct: 45 RSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALGKRSGI 98
Query: 474 RNTCVFGG 497
R V+GG
Sbjct: 99 RTVVVYGG 106
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 56.0 bits (129), Expect = 7e-07
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 243 PFKLRLA---DSYVWKEFSWRSQTGSGKTLAYILPAIVHI--NNQPPIRR-GDGPIALVL 404
PF ++ A D K+ R +TGSGKT+A+ P + + NN R+ G P AL+L
Sbjct: 395 PFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAPLVERLMENNGGKDRQMGRKPRALIL 454
Query: 405 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 506
APTRELAQQI + + + T + GG P+
Sbjct: 455 APTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQ 488
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 56.0 bits (129), Expect = 7e-07
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA QI + A
Sbjct: 311 AQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEA 370
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S +R ++GG
Sbjct: 371 KKFSYRSRMRPAVLYGG 387
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 434
+QTGSGKTLAY+LPA+VH+ I P L+L PTREL QI
Sbjct: 103 AQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQI 148
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 55.6 bits (128), Expect = 9e-07
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ + TG+GKT A++LP I + +P R ALVLAPTRELA QI + FG
Sbjct: 42 KDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERFG 95
Query: 459 HTSYVRNTCVFGG 497
H VR + GG
Sbjct: 96 HARRVRGAVIIGG 108
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 55.6 bits (128), Expect = 9e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+++TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A H +
Sbjct: 47 QARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLTHGQRI 103
Query: 474 RNTCVFGGAPKRSK 515
V+GG P RS+
Sbjct: 104 NVVAVYGGKPLRSQ 117
>UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_151, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 635
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR----RGDGPIALVLAPTRELAQQIQQVAADFGHT 464
S TGSGKTLAY+LP + + + + P A+VL PTREL++Q+ +VA H
Sbjct: 163 SHTGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHH 222
Query: 465 SYVRNTCVFGGAPKR 509
+ R+T V GG R
Sbjct: 223 ARFRSTMVSGGGRLR 237
>UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 792
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQV 443
K+ R+QTGSGKTLAY LP + +++Q + R DG +A+V+ PTRELA Q ++
Sbjct: 193 KDVLIRAQTGSGKTLAYALPLVERLHSQEVKVSRSDGILAVVIVPTRELALQTYEL 248
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A+++P I H+ NQ + P L+LAPTRELA QI + F
Sbjct: 228 AQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLN 287
Query: 465 SYVRNTCVFGGAPKRSK 515
+ +R+ V+GGA S+
Sbjct: 288 TPLRSCVVYGGADTHSQ 304
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQQVAADF 455
+QTGSGKT A+++P + + P + + P+AL+LAPTRELA QI A F
Sbjct: 255 AQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKF 314
Query: 456 GHTSYVRNTCVFGGAPKRSK 515
+ S VR V+GG R +
Sbjct: 315 SYRSLVRPCVVYGGRDIRGQ 334
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 270 YVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVA 446
Y K+ +++TG+GKT ++ +P I ++ + R RG P LVLAPTRELA Q+ +
Sbjct: 221 YSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDF 280
Query: 447 ADFGHTSYVRNTCVFGGAP 503
+D T + C +GG P
Sbjct: 281 SDI--TKKLSVACFYGGTP 297
>UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp7 - Schizosaccharomyces pombe (Fission
yeast)
Length = 709
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQIQQVAADFGH--- 461
+QTGSGKTLAY+LP + + P R G A+++APTREL QQI VA +
Sbjct: 185 AQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPL 244
Query: 462 TSYVRNTCVFGGAPKRSKPGTWRR 533
+ ++ + V GG K+S+ R+
Sbjct: 245 SHWIVSCNVIGGEKKKSEKARIRK 268
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSY 470
++ TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +G
Sbjct: 100 QAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLG 156
Query: 471 VRNTCVFGGAP 503
R V+GGAP
Sbjct: 157 ARVLPVYGGAP 167
>UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-dependent RNA helicase -
Sulfurovum sp. (strain NBC37-1)
Length = 447
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
+QTGSGKTLAY+LPA+ IN + P +L+PT+ELAQQI +V+ F
Sbjct: 45 AQTGSGKTLAYLLPALQQINPEAEKVTHHYPRLFILSPTKELAQQIYEVSRPF 97
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 258 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQ 431
L D+ ++ R +TGSGKT+A+ +P + + + R+ P+ LVLAPTRELA Q
Sbjct: 33 LPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAEREAKHFRKPGRPMGLVLAPTRELATQ 92
Query: 432 IQQVAADFGHTSYVRNTCVFGG 497
I + T ++GG
Sbjct: 93 INATIEPMAKAMGLNTTVIYGG 114
>UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 560
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-S 467
R++TGSGKTL+YI P I P + R +G LVL PTRELA Q++ A G
Sbjct: 44 RAETGSGKTLSYIAPLYSKIGGITPRVTREEGTRGLVLVPTRELATQVEDTARRVGRPFH 103
Query: 468 YVRNTCVFGGAPKRSKPGTWRR 533
+V + + GG + + R+
Sbjct: 104 WVVTSSIMGGENRAKEKARLRK 125
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA+++PAI + + ++ DG I L++APTRELA QI VA + V
Sbjct: 71 AKTGSGKTLAFLIPAIDLLFRKNATKK-DGTIVLIVAPTRELADQIFDVATLLLKDTEVS 129
Query: 477 NTCVFGGAPKRSK 515
+GG K+++
Sbjct: 130 FGAAYGGKEKKNE 142
>UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 877
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+++TGSGKTLAY+LP + I N I R G A++L+PTREL +QI V
Sbjct: 300 QAETGSGKTLAYLLPIVERILALSENGVQIHRDSGLFAIILSPTRELCKQIAAVLEKVLR 359
Query: 462 TS-YVRNTCVFGGAPKRSKPGTWRR 533
+ ++ T V GG K+S+ R+
Sbjct: 360 CAPWIVGTTVNGGESKQSEKARLRK 384
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQVAADFGH 461
+QTGSGKT A+ P I I I R G P+A++L+PTRELA QI A F +
Sbjct: 190 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 249
Query: 462 TSYVRNTCVFGGAP 503
+ V+ +GG P
Sbjct: 250 QTGVKVVVAYGGTP 263
>UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=3; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 39 - Oryza sativa subsp. japonica (Rice)
Length = 625
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI----RRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
S TGSGKTLAY+LP + + + + P A+VL PTREL +Q+ +VA H
Sbjct: 154 SHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHH 213
Query: 465 SYVRNTCVFGGA 500
+ R+T V GG+
Sbjct: 214 ARFRSTMVSGGS 225
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 26 DSVSLQPFNKNF-YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYV 202
DS P N ++ Y HP +L ++E + + + V G EV PI FE + P+ +
Sbjct: 155 DSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVL 214
Query: 203 QQGVKTMGYKEPTPIQAQ 256
+K GY+ PTPIQ Q
Sbjct: 215 NHNLKKSGYEVPTPIQMQ 232
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 473
+ TGSGKT A++LP I+ + P AL+L PTRELA QI++ A + +
Sbjct: 247 ADTGSGKTAAFLLPVIMRA-----LFESKTPSALILTPTRELAIQIERQAKELMSGLPRM 301
Query: 474 RNTCVFGGAP 503
+ + GG P
Sbjct: 302 KTVLLVGGLP 311
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +QTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ +
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 459 HTSYVRNTCVFGG 497
+ +R CV+GG
Sbjct: 102 EHTDLRIVCVYGG 114
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +3
Query: 243 PFKLRLA---DSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 413
PF++++A D+ ++ R+ TGSGKTLA+ +P + ++ P R + P AL+L+PT
Sbjct: 252 PFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATP--REDNRPRALILSPT 309
Query: 414 RELAQQIQQVAADFGHTSYVRNTCVFGG 497
RELA QI + + + + GG
Sbjct: 310 RELAMQIADALSSLASSMGLSTILIAGG 337
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA QI + + S +
Sbjct: 45 AQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNL 104
Query: 474 RNTCVFGG 497
R+T VFGG
Sbjct: 105 RSTAVFGG 112
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 270 YVWKEFSWRSQTGSGKTLAYILPAIVHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQ 440
Y K+ +++TG+GKTLA++LP I + + P + G P+ LVL PTRELAQQ+
Sbjct: 99 YGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGRRPLVLVLLPTRELAQQVSN 158
Query: 441 VAADFGHTSYVRNTCVFGGAPK 506
+ V+GG+P+
Sbjct: 159 EFELMKGKDRYKVCSVYGGSPE 180
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA Q + +
Sbjct: 245 AQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEES 304
Query: 447 ADFGHTSYVRNTCVFGGAPKRSK 515
F + +R ++GG+ RS+
Sbjct: 305 RKFCFGTGIRTNVLYGGSEVRSQ 327
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQ 440
K+ +QTGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYL 367
Query: 441 VAADFGHTSYVRNTCVFGG 497
A F ++ VR V+GG
Sbjct: 368 EARKFASSTCVRPVVVYGG 386
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFLGK 586
QAR+LEKG +V+ TPG L+ F+GK
Sbjct: 392 QARELEKGAHVVVGTPGRLLDFIGK 416
>UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 585
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ 431
+S+TGSGKTL Y +P + + + P I R DGP A+VL PTRELA Q
Sbjct: 151 KSKTGSGKTLCYAIPVVQTLQDIVPKIERADGPYAVVLVPTRELALQ 197
>UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babesia
bovis|Rep: RNA helicase family protein - Babesia bovis
Length = 1100
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
S SGKTLAY+LP I + + R + P ALVL P RELA QI V GH
Sbjct: 525 SNAASGKTLAYLLPIIQKLKKHETLKLRHPNAPRALVLVPNRELADQILHVVKGLGHVVK 584
Query: 471 VRNTCVFGGAPK 506
+ + + GG K
Sbjct: 585 ISSEIISGGVYK 596
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/79 (41%), Positives = 41/79 (51%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ ++TGSGKT AY+LP H+ P ALV APTRELA QI V D G
Sbjct: 44 KDICGTAETGSGKTGAYMLPIFHHMWENP-----HSFFALVFAPTRELATQIDHVTRDIG 98
Query: 459 HTSYVRNTCVFGGAPKRSK 515
VR + GG + S+
Sbjct: 99 KDIKVRVCTIIGGVDEDSQ 117
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTGSGKT A+ +P + + ++Q P A +LAPTRELAQQI++ G V
Sbjct: 125 AQTGSGKTAAFAIPILNRLWHDQEPY------YACILAPTRELAQQIKETFDSLGSLMGV 178
Query: 474 RNTCVFGG 497
R+TC+ GG
Sbjct: 179 RSTCIVGG 186
>UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG8611-PA, isoform A - Tribolium castaneum
Length = 624
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
RSQTGSGKTLAY LP + ++ +P ++R DG A+++ PTRELA Q ++ +
Sbjct: 172 RSQTGSGKTLAYALPIMNALLSVEPRLQRQDGVQAIIVVPTRELALQTHEIFGKINTFQW 231
Query: 471 VRNTCVFGGAPKRSKPGTWRR 533
+ + GG ++++ R+
Sbjct: 232 LVIGHLCGGENRKTEKDKLRK 252
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 54.0 bits (124), Expect = 3e-06
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G +
Sbjct: 48 AQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYGRDLGM 105
Query: 474 RNTCVFGGAP-----KRSKPGT 524
R V+GG P KR K GT
Sbjct: 106 RVISVYGGVPVENQIKRLKRGT 127
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 440
+ TGSGKTLA+ +P + ++ P ++ DGP+ALVL PTRELAQQI Q
Sbjct: 220 ASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQ 271
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT ++ P + P R P ALVLAPTRELA QI + A
Sbjct: 198 AQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEA 257
Query: 447 ADFGHTSYVRNTCVFGGAP 503
F + S+VR V+GGAP
Sbjct: 258 RKFTYRSWVRPCVVYGGAP 276
>UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio
bacteriovorus|Rep: RNA helicase - Bdellovibrio
bacteriovorus
Length = 460
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQP----PIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
S+TGSGKTLAY+LP + ++ + P++ + P A+V+ P+REL +Q+ +V H
Sbjct: 98 SETGSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVMVPSRELGEQVAKVFKSMTHD 157
Query: 465 SYVRNTCVFGG 497
+ +R GG
Sbjct: 158 TRLRVRPALGG 168
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
SQTGSGKT A++LP + + P GP AL+L PTRELA Q V G ++
Sbjct: 64 SQTGSGKTAAFVLPMLQKLTEAGP---APGPRALILEPTRELAAQTAAVCRQLGRRLSLK 120
Query: 477 NTCVFGGAPKRSK 515
+ GG + +
Sbjct: 121 TRVICGGTSREQQ 133
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 53.6 bits (123), Expect = 4e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVR 476
TG+GKT+AY+ P I H++ P I R G ALVL PTREL Q+ ++ H ++
Sbjct: 77 TGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHWIV 136
Query: 477 NTCVFGGAPKRSK 515
V GG RSK
Sbjct: 137 PGYVMGG-ENRSK 148
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+QTGSGKT A+++P + + ++ + P+ALV+APTRELA QIQ+ A F
Sbjct: 397 AQTGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQ 456
Query: 462 TSYVRNTCVFGG 497
+ ++ ++GG
Sbjct: 457 NTSIKPVVIYGG 468
>UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2;
Theileria|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 663
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
RS +G+GKTL +I+PA+ + P I R DG L++ PTREL+ QI +V D
Sbjct: 115 RSPSGTGKTLTFIVPALQRLIAPPDNKKITRRDGTKILIITPTRELSFQISKVTEDLSKP 174
Query: 465 -SYVRNTCVFGGAPKRSKPGTWRR 533
++ +C+ GG ++S+ R+
Sbjct: 175 FPWIVVSCIKGGESRKSEKARIRK 198
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+ F
Sbjct: 311 AETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGRL 370
Query: 468 YVRNTCVFGG 497
+R + GG
Sbjct: 371 GLRCVSIVGG 380
Score = 39.9 bits (89), Expect = 0.047
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 50 NKNFYDPHPTVLKRSPYEVEEYRNKHE---VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 220
+K F D H + S + ++R E ++ G + P++ + E+ P + ++
Sbjct: 225 DKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIPASILSTIEE 284
Query: 221 MGYKEPTPIQAQA 259
+GYKEP+PIQ QA
Sbjct: 285 VGYKEPSPIQRQA 297
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 53.6 bits (123), Expect = 4e-06
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
R++TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++ +F ++
Sbjct: 147 RARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK---EFRESAP 203
Query: 471 VRNT-CVFGGAP 503
+T C++GG P
Sbjct: 204 SLDTICLYGGTP 215
>UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase DBP7
- Yarrowia lipolytica (Candida lipolytica)
Length = 799
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS-- 467
++QTGSGKTLA++LP + I + + R G A++L PTREL QI V +
Sbjct: 277 QAQTGSGKTLAFVLPVLERIMSCDDVSRETGLFAVILTPTRELTTQIYSVLETLCRKACP 336
Query: 468 YVRNTCVFGGAPKRSKPGTWRR 533
++ V GG K+S+ R+
Sbjct: 337 WIVPGIVIGGEKKKSEKARIRK 358
>UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
DBP7 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 747
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQP--PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++QTGSGKTL+++LP + + + PI R G A+VL PTRELA QI V
Sbjct: 180 KAQTGSGKTLSFLLPILHKLMQEKKNPITRESGVFAIVLVPTRELANQIYGVLETLTRCH 239
Query: 468 Y-VRNTCVFGGAPKRSKPGTWRR 533
+ + V GG K+S+ R+
Sbjct: 240 HQIVPGIVIGGEKKKSEKARIRK 262
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A+++P + + + PP RR P+ LVLAPTRELA QI + A
Sbjct: 339 AQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEA 398
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S +R ++GG
Sbjct: 399 KKFAYRSRMRPAVLYGG 415
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 270 YVWKEFSWRSQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 446
Y K+ +++TG+GKT ++ +P + ++ +Q P+ RG P ++L PTRELA QI
Sbjct: 256 YSGKDVVVQARTGTGKTFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNEL 315
Query: 447 ADFGHTSYVRNTCVFGGAP 503
T ++ C +GG P
Sbjct: 316 RSM--TKKLKVACFYGGTP 332
>UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 10 - Plasmodium
falciparum
Length = 899
Score = 53.2 bits (122), Expect = 5e-06
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
+S TGSGKTL Y +P+I I N + I R G LVL+PTRELA QI +
Sbjct: 216 KSMTGSGKTLCYAIPSIEKILNMKEKVKITRDMGIFVLVLSPTRELAIQINNLFCILTKP 275
Query: 465 -SYVRNTCVFGGAPKRSK 515
Y+ +C+ GG K+S+
Sbjct: 276 YPYIVASCITGGEKKKSE 293
>UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;
cellular organisms|Rep: DEAD/DEAH box helicase, putative
- Plasmodium vivax
Length = 981
Score = 53.2 bits (122), Expect = 5e-06
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+S TGSGKTL+Y LP+I I N + I R G LVL+PTRELA QI +
Sbjct: 163 KSMTGSGKTLSYALPSIQKILNLQKEKIKITRDMGTFILVLSPTRELAIQINSLFTTLTK 222
Query: 462 T-SYVRNTCVFGGAPKRSK 515
Y+ +C+ GG K+S+
Sbjct: 223 PYPYIVVSCLTGGEKKKSE 241
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 53.2 bits (122), Expect = 5e-06
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQIQQVA 446
++TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL QI VA
Sbjct: 138 AETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQITSVA 197
Query: 447 ADFGHTSYVRNTCVFGGAPKRSK 515
+++R+ V GG RS+
Sbjct: 198 KTLLKLTHLRSVSVIGGVDARSQ 220
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TG+GKT A++LPA+ H+ + P + G P LVL PTRELA Q+ + A + +++
Sbjct: 50 TGTGKTAAFLLPALQHLLDYPRRKPGP-PRILVLTPTRELAMQVAEQAEELAQFTHLNIA 108
Query: 483 CVFGG 497
+ GG
Sbjct: 109 TITGG 113
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRR-----GDGPIALVLAPTRELAQQIQQVAADFG 458
R++TG GKTLA++LP + + N P + G P LVL PTRELA+Q+ +G
Sbjct: 139 RARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYG 198
Query: 459 HTSYVRNTCVFGGAPKRSKPGTWRR 533
+ + + C++GG + G +R
Sbjct: 199 GSLGLSSCCLYGGDSYPVQEGKLKR 223
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 62 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 241
Y HP ++ ++E + + ++V G EV PI FE FP+ + Q +K GY+ PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 242 PIQAQ 256
PIQ Q
Sbjct: 228 PIQMQ 232
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYV 473
+ TGSGKT A++LP I+ + P AL+L PTRELA QI++ A + +
Sbjct: 247 ADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRM 301
Query: 474 RNTCVFGGAP 503
+ + GG P
Sbjct: 302 KTVLLVGGLP 311
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTG+GKT AY LP + + PP G + AL+L+PTR+LA QI FG +++
Sbjct: 57 AQTGTGKTAAYALPLLQQLTEGPP-----GQLRALILSPTRDLADQICVAMNHFGRQTHL 111
Query: 474 RNTCVFGG 497
R ++GG
Sbjct: 112 RCATIYGG 119
Score = 32.3 bits (70), Expect = 9.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
F E NF + G++T GY+ TPIQ +A
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKA 43
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 52.8 bits (121), Expect = 6e-06
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 473
+QTG+GKT A+ LP + N+ +R P LVLAPTRELAQQ+ + H S V
Sbjct: 50 AQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAVESYSKHESNV 104
Query: 474 RNTCVFGGA 500
+ ++GG+
Sbjct: 105 KVASIYGGS 113
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 52.8 bits (121), Expect = 6e-06
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 434
K+ S+TGSGKT A+++PAI + Q + R D P AL+LAPTRELA+Q+
Sbjct: 39 KDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQD-PRALILAPTRELAKQV 89
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTS 467
+QTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A F + +
Sbjct: 164 AQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKT 223
Query: 468 YVRNTCVFGGAP 503
++ +GGAP
Sbjct: 224 GLKVVVAYGGAP 235
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 52.8 bits (121), Expect = 6e-06
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +3
Query: 258 LADSYVWKEFSWRSQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQ 431
L S ++ +++TGSGKTLAY++P + +I +N I DG ++L+L PTRELA Q
Sbjct: 102 LPHSLQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSI---DGLLSLILTPTRELASQ 158
Query: 432 IQQVAADFG-HTSYVRNTCVFGGAPKRSK 515
+ V + G S + C+ GG +S+
Sbjct: 159 VFDVIKEIGKFHSTLSAGCIVGGKDIKSE 187
>UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase;
n=2; Cryptosporidium|Rep: Dbp7p, eIF4A-a-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 838
Score = 52.8 bits (121), Expect = 6e-06
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +3
Query: 291 WRSQTGSGKTLAYILPAIVH--INN--QPPIRRGDGPIALVLAPTRELA-QQIQQVAADF 455
+R+ TG+GKTL++++PAI +N+ + RR DG I L+L PTREL Q I+
Sbjct: 81 FRAPTGTGKTLSFLVPAIQRSLLNDIGRTTFRRSDGTIILILTPTRELCIQTIETARLIV 140
Query: 456 GHTSYVRNTCVFGGAPKRSKPGTWRR 533
S+ C+ GG ++S+ R+
Sbjct: 141 QKMSWCVTGCICGGEKRKSEKARLRK 166
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKT A++LP + + P P ++++PTRELA QI A F SY++
Sbjct: 289 AQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLK 348
Query: 477 NTCVFGGAPKR 509
V+GG R
Sbjct: 349 IGIVYGGTSFR 359
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +2
Query: 119 NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
N V V+G +V PIQ+F A+ D + V GYK PTPIQ
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQ 272
>UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 39 - Arabidopsis thaliana (Mouse-ear cress)
Length = 621
Score = 52.8 bits (121), Expect = 6e-06
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQVAADFGH 461
S TGSGKTLAY+LP IV + + G P +VL PTREL++Q+ +VA H
Sbjct: 156 SHTGSGKTLAYLLP-IVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISH 214
Query: 462 TSYVRNTCVFGGA 500
+ R+ V GG+
Sbjct: 215 HARFRSILVSGGS 227
>UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Gibberella zeae|Rep: ATP-dependent RNA helicase DBP7 -
Gibberella zeae (Fusarium graminearum)
Length = 744
Score = 52.8 bits (121), Expect = 6e-06
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAI-----VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
+++TGSGKTLAY+LP + + + I R G A+++APTRELA+Q+ V
Sbjct: 194 QAETGSGKTLAYLLPILHRVLLLSVKGGAQIHRDSGAFAIIVAPTRELAKQVHTVLEKLI 253
Query: 459 HT-SYVRNTCVFGGAPKRSKPGTWRR 533
++ +T + GG K+++ R+
Sbjct: 254 RPFPWLVSTAITGGESKKAEKARIRK 279
>UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n=1;
Deinococcus radiodurans|Rep: ATP-dependent RNA helicase,
putative - Deinococcus radiodurans
Length = 478
Score = 52.4 bits (120), Expect = 8e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKTLA+++PA RG P L+++PTRELA QI+ VA + G T+
Sbjct: 71 ARTGSGKTLAFLIPAAARGIGVTGKTRGMAPEVLIVSPTRELAVQIRDVARELGMTA 127
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 52.4 bits (120), Expect = 8e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTG+GKT A+++P + + N D LV+APTRELA QI +V G + +R
Sbjct: 45 AQTGTGKTAAFVIPVLNTLINVKKSEHTDIS-CLVMAPTRELAVQISEVFKKIGAYTRLR 103
Query: 477 NTCVFGGAPKRSK 515
C+ GG + ++
Sbjct: 104 TVCITGGVEQEAQ 116
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 52.4 bits (120), Expect = 8e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRN 479
TG+GKT AY+LP + ++ P+ AL L PTRELA Q+++ A +G +R
Sbjct: 48 TGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKYGKGLNLRT 107
Query: 480 TCVFGGAPKRSKPGTWRR 533
VFGG S+ ++R
Sbjct: 108 ISVFGGVRIPSQVNRFKR 125
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 52.4 bits (120), Expect = 8e-06
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYV 473
+QTG+GKT A+ LP + +I+ + +R P ALVL PTRELAQQ+ + +G +
Sbjct: 53 AQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAFRSYGRGMGGL 107
Query: 474 RNTCVFGGAPKRSK 515
R +FGGA R +
Sbjct: 108 RILSIFGGADMRQQ 121
Score = 32.7 bits (71), Expect = 7.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQA 253
F PD++Q+ ++++GY+ TPIQA
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQA 37
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 52.4 bits (120), Expect = 8e-06
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKTLA++LP + H+ Q G P LVLAPTREL QI A F +R
Sbjct: 152 TGSGKTLAFLLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQFALGFRLRLG 207
Query: 483 CVFGG 497
FGG
Sbjct: 208 LAFGG 212
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 52.4 bits (120), Expect = 8e-06
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q ++
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQTHIECQKIFSLMDKKSA 205
Query: 483 CVFGG 497
C+ GG
Sbjct: 206 CLVGG 210
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 44 PFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 220
P KN Y P + +S ++E+ R + + V G+ V PI + + P + ++
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 221 MGYKEPTPIQAQA 259
G+K+PT IQ QA
Sbjct: 119 RGFKQPTSIQCQA 131
>UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Eremothecium gossypii|Rep: ATP-dependent RNA helicase
DBP7 - Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 710
Score = 52.4 bits (120), Expect = 8e-06
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTGSGKTLA++LP + ++ + I R G A+++ PTRELA QI V + +
Sbjct: 180 AQTGSGKTLAFLLPVLQTLLSLEQRIDRHSGCFAMIVTPTRELAAQIYGVISTLAQCCHY 239
Query: 474 RNTCVF-GGAPKRSKPGTWRR 533
C+ GG K+S+ R+
Sbjct: 240 LVPCLLVGGERKKSEKARLRK 260
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 52.4 bits (120), Expect = 8e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A+ +PAI H+ N R G LV++PTRELA QI ++
Sbjct: 156 AETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLTDKVGMQ 212
Query: 477 NTCVFGGAPK 506
CV+GG PK
Sbjct: 213 CCCVYGGVPK 222
>UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG8611-PB - Nasonia vitripennis
Length = 964
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ 431
K+ RSQTGSGKTLAY LP I + +P + R G ALV+ PTRELA Q
Sbjct: 366 KDVLVRSQTGSGKTLAYALPIIETLQRVRPKLARDSGIKALVVVPTRELALQ 417
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
SQTG+GKTLAY+LP + P + AL+LAPT+ELA QI +VA T+ +
Sbjct: 46 SQTGTGKTLAYLLPMLTKTEELPEQTQ-----ALILAPTQELAMQIVEVAKQLTATTSIT 100
Query: 477 NTCVFGGA 500
+ GGA
Sbjct: 101 VLPLIGGA 108
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSY 470
++QTG+GKT A+++ H N P G P AL+LAPTRELA QI A G
Sbjct: 158 KAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILAPTRELALQIGADAEGLGKYCD 217
Query: 471 VRNTCVFGG 497
+R FGG
Sbjct: 218 IRVETFFGG 226
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
R+QTG+GKT +I+ + N P RR P ALVLAPTRELA QI++ +
Sbjct: 159 RAQTGTGKTAVFIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHT 218
Query: 468 YVRNTCVFGG 497
++ +FGG
Sbjct: 219 PFKSVAIFGG 228
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFGHTSYVRN 479
TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G VR
Sbjct: 139 TGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG-CGQVRV 192
Query: 480 TCVFGGAPK 506
+GGAP+
Sbjct: 193 CEAYGGAPR 201
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
S TG+GKTL +++P I+ I + PI +GP LV+ P+RELA QI + F T
Sbjct: 233 SSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQISDITKYF--TG 290
Query: 468 YVRN--------TCVFGG 497
Y+ N +CV GG
Sbjct: 291 YIYNYGGPKLYCSCVIGG 308
Score = 33.5 bits (73), Expect = 4.0
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 104 VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
V+ RN + VSG +V PI FE+ P + + + EPT IQ QA
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQA 219
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVA 446
++TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 186 AETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEA 238
Score = 39.9 bits (89), Expect = 0.047
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
+R + + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q
Sbjct: 124 FREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQ 171
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TG+GKT AY+LPA+ H+ + P + G P L+L PTRELA Q+ A + +++
Sbjct: 50 TGTGKTAAYLLPALQHLLDFPRKKSGP-PRILILTPTRELAMQVSDHARELAKHTHLDIA 108
Query: 483 CVFGG 497
+ GG
Sbjct: 109 TITGG 113
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHIN-------NQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
++TGSGKTLA++LP + +++ N +R + P+ALVLAPTRELA QI Q A F
Sbjct: 229 AETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVR--NEPLALVLAPTRELALQITQEAEKF 286
Query: 456 GHTSYVRNTCVFGG 497
G + GG
Sbjct: 287 GKQLGFNVLSIIGG 300
>UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP7 -
Ustilago maydis (Smut fungus)
Length = 974
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +3
Query: 294 RSQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 443
++QTGSGKTL Y+LP +++ + + I R G +A+VLAPTRELA+QI +V
Sbjct: 248 QAQTGSGKTLTYLLPIVQSLLPLCEESFIDRSVGTLAIVLAPTRELARQIYEV 300
>UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Pichia stipitis (Yeast)
Length = 733
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT- 464
++QTGSGKTL+++LP + + N+ I R G A++L PTRELA QI V
Sbjct: 189 KAQTGSGKTLSFLLPIFHKLMMENKHKINRDSGLFAVILTPTRELATQIYGVLETLTRCY 248
Query: 465 SYVRNTCVFGGAPKRSKPGTWRR 533
++ V GG K+S+ R+
Sbjct: 249 HHIVPGIVIGGEKKKSEKARIRK 271
>UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP7 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 831
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQQIQQV 443
+++TGSGKTLAY+LP + + + ++R G A+++APTREL++QI V
Sbjct: 230 QAETGSGKTLAYLLPIVQRLMELSANMKKHKDDDAVQRNSGLFAIIMAPTRELSKQIALV 289
Query: 444 AAD-FGHTSYVRNTCVFGGAPKRSKPGTWRR 533
G ++ T V GG K+S+ R+
Sbjct: 290 LEKLLGCAHWLVATTVIGGEKKKSEKARLRK 320
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +++TGSGKTLA+++P IV I N+ + +G A++++PTRELA Q V
Sbjct: 119 KDIMAKARTGSGKTLAFLIP-IVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKIL 177
Query: 459 HTSYVRNTCVFGGAPKRSK 515
S T + GG+ K+ +
Sbjct: 178 AHSERTRTLIIGGSSKKKE 196
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/70 (41%), Positives = 37/70 (52%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+ TGSGKTLAY LP + + P + ALVL PTRELA Q+ +V G +
Sbjct: 66 ANTGSGKTLAYGLPLLERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALGLN 119
Query: 477 NTCVFGGAPK 506
C+ GG K
Sbjct: 120 TLCLCGGVDK 129
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAAD- 452
K+ + +QTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKL 93
Query: 453 FGHTSYVRNTCVFGGAPKRSK 515
H+ +R+ + GG +S+
Sbjct: 94 LKHSEGIRSVPIIGGTDYKSQ 114
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTG+GKT ++ LP + + P +G LVLAPTREL QI F VR
Sbjct: 51 AQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVR 110
Query: 477 NTCVFGG 497
T +FGG
Sbjct: 111 VTTIFGG 117
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 449
K+ R++TG+GKTLA+ LP I ++ + + RG P A+V+APTRELA+Q+ + +
Sbjct: 38 KDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPRAIVIAPTRELAKQVAEEFS 97
Query: 450 DFGHTSYVRNTCVFGGAPKRSKPGTWRR 533
G + V+GGA + RR
Sbjct: 98 KSG--PQLSTVTVYGGAAYGPQENALRR 123
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
+QTG+GKT A+ LP + H + +P R AL+L+PTRELA QI + AD +
Sbjct: 48 AQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIADLSEGT 104
Query: 468 YVRNTCVFGGAPKR 509
+ + VFGG R
Sbjct: 105 PISHCVVFGGVSVR 118
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTG+GKT A++L + ++ P + GP A+VLAPTRELA QI++ G + +
Sbjct: 53 AQTGTGKTAAFLLSLMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLV 112
Query: 477 NTCVFGG 497
+ ++GG
Sbjct: 113 SLAIYGG 119
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
+++TGSGKTLA+ +P + + P + RG GP A++ PTRELA Q+Q V G +
Sbjct: 129 QARTGSGKTLAFGIPIVERLLKLPSHLTRGRGPAAVIFCPTRELAIQVQDVLC--GISCG 186
Query: 471 VRNTCVFGG 497
+ T ++GG
Sbjct: 187 LVVTALYGG 195
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 270 YVWKEFSWRSQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 446
Y K+ +++TG+GKT ++ +P I + NQ I++ P LVLAPT ELA Q+ +
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGELANQVAKDF 231
Query: 447 ADFGHTSYVRNTCVFGGAPKRSK 515
D T + C +GG +S+
Sbjct: 232 KDI--TRKLSVACFYGGTSYQSQ 252
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 455
TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q +V F
Sbjct: 192 TGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQF 245
Score = 39.1 bits (87), Expect = 0.081
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 62 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 241
+ P + K S + + R + + V+G ++ PI+ F++ FP V +K G +PT
Sbjct: 111 WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPT 170
Query: 242 PIQAQ 256
PIQ Q
Sbjct: 171 PIQVQ 175
>UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVR 476
TG+GKT+AY+ P I H+ + P + R G ALV+ PTREL Q+ + H ++
Sbjct: 76 TGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIV 135
Query: 477 NTCVFGGAPKRSKPGTWRR 533
V GG K + R+
Sbjct: 136 PGYVMGGEKKAKEKARLRK 154
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
S TG+GKTLAY+LP + IN P +++ P +VLAPTREL QI + F + +
Sbjct: 42 SPTGTGKTLAYLLPLLHKIN--PEVKQ---PQVVVLAPTRELVMQIHEEVQKFTAGTEIS 96
Query: 477 NTCVFGGA 500
+ GGA
Sbjct: 97 GASLIGGA 104
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ S TG+GKTLAY LP + I +P + P A++LAP+REL QI QV D+
Sbjct: 42 KDVIAESPTGTGKTLAYALPVLERI--KPEQKH---PQAVILAPSRELVMQIFQVIQDWK 96
Query: 459 HTSYVRNTCVFGGA 500
S +R + GGA
Sbjct: 97 AGSELRAASLIGGA 110
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +QTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 459 HTSYVRNTCVFGGAP 503
+R+ VFGG P
Sbjct: 98 KYLPLRSAVVFGGVP 112
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ +QTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 459 HTSYVRNTCVFGGAP 503
+R+ VFGG P
Sbjct: 98 KYLPLRSAVVFGGVP 112
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 51.2 bits (117), Expect = 2e-05
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI--NNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHT 464
R++TG+GKTLA+ LP I + N + RG P +VLAPTRELA+Q++ F
Sbjct: 68 RARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEI--FITA 125
Query: 465 SYVRNTCVFGGAPKRSKPGTWRR 533
+ CV+GG P + RR
Sbjct: 126 PTLDTACVYGGTPIGQQESKLRR 148
>UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 546
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 446
K+ + + TGSGKTLAY++P++ +I DG LVL PTRELAQQ+ +VA
Sbjct: 48 KDVAVEAVTGSGKTLAYLVPSMEYIKKST-----DGLAVLVLVPTRELAQQVYEVA 98
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINN---QP-PIRRGDGPIALVLAPTRELAQQIQQ-----VAA 449
+ TGSGKTLA+++P ++ + +P ++ +GP AL+LAPTRELAQQIQ ++
Sbjct: 233 ASTGSGKTLAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEIKKILSL 292
Query: 450 DFGHTSYVRNTCVFGG 497
+ + + C+ GG
Sbjct: 293 SSNELTKITSICIVGG 308
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A F
Sbjct: 207 AETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPL 266
Query: 468 YVRNTCVFGG 497
+ V GG
Sbjct: 267 GFKVVSVVGG 276
Score = 39.5 bits (88), Expect = 0.062
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQA 259
VT G + NP++ + E P V+ + MGYKEPTPIQ A
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAA 193
>UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX28;
n=19; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX28 - Homo sapiens (Human)
Length = 540
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR--GDGPIALVLAPTRELAQQIQQVAADFGHT 464
++TGSGKTL+Y+LP + + QP + P LVL P+RELAQQ++ VA G +
Sbjct: 172 AETGSGKTLSYLLPLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQVRAVAQPLGRS 229
>UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3561-PA - Tribolium castaneum
Length = 446
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVH-INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++TGSGKT+AY+LP I + I N+ P + + P AL+L P RELA Q+ +VA S +
Sbjct: 130 AETGSGKTIAYLLPIICNLITNKTP--KLNTPQALILVPNRELAYQVGEVAEALAE-SLL 186
Query: 474 RNTCVFGGAPKR 509
+ GG K+
Sbjct: 187 NVKIIVGGRTKK 198
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ ++QTG+GKT A+ +P + +N I AL++ PTRELA QI + G
Sbjct: 83 KDLIAQAQTGTGKTAAFAIPILNTLNRNKDIE------ALIITPTRELAMQISEEILKLG 136
Query: 459 HTSYVRNTCVFGG 497
++ C++GG
Sbjct: 137 RFGRIKTICMYGG 149
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 50.8 bits (116), Expect = 2e-05
Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
+QTG+GKT A++LP + I N P R ALVLAPTRELA QI A +G +
Sbjct: 101 AQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTYGKFTR 158
Query: 471 VRNTCVFGGAPKRSKPGTWRR 533
V GGA KPG R
Sbjct: 159 PSVAVVIGGA----KPGPQAR 175
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G R
Sbjct: 40 AQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFR 99
Query: 477 NTCVFGG 497
T +FGG
Sbjct: 100 LTTIFGG 106
>UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1;
Bigelowiella natans|Rep: ATP-dependent RNA helicase -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 507
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ ++TGSGKTL Y++P IV +N +R +V+APTREL QI + +
Sbjct: 172 KDIFCLAKTGSGKTLCYLIPLIVGLNRLKNVRN------IVIAPTRELVLQIGRESYYLT 225
Query: 459 HTSYVRNTCVFGGA 500
S +R C +GG+
Sbjct: 226 KHSNIRTFCFYGGS 239
>UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 925
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = +3
Query: 243 PFKLRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIA-LVLAPT 413
P+ + + Y+ K+ +++TG+GKT+A++LPAI ++ PPI R PI+ +V+ PT
Sbjct: 481 PYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDRDQKRPPISVVVVCPT 540
Query: 414 RELAQQ 431
RELA Q
Sbjct: 541 RELADQ 546
>UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n=2;
Trypanosoma cruzi|Rep: ATP-dependent RNA helicase,
putative - Trypanosoma cruzi
Length = 886
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD------GPIALVLAPTRELAQQIQQVAADFG 458
++TGSGKT AY++P I + P G+ GP+ALV+ PTRELA+Q+ + A +
Sbjct: 262 AETGSGKTAAYLIPLFADILRRTPRLLGNEALISHGPLALVMVPTRELAEQVTREAIEII 321
Query: 459 H 461
H
Sbjct: 322 H 322
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVH--INNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
+QTGSGKT A+++P + + ++ P R R PIALVLAPTRELA QI +
Sbjct: 516 AQTGSGKTAAFLIPVVQYMLVHGVSPARQRKSYPIALVLAPTRELAVQIFDEVRKLTFNT 575
Query: 468 YVRNTCVFGG 497
+ V+GG
Sbjct: 576 DIFYDVVYGG 585
>UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 312
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKT+A+++P I + Q +GP A++LAPTRELA QI A + V+ T
Sbjct: 231 TGSGKTIAFLIPIINSLLAQGKEEGKEGPRAIILAPTRELASQIVNEARKLAKGTAVKGT 290
Query: 483 CVFGG 497
+ G
Sbjct: 291 LMRKG 295
>UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Magnaporthe grisea|Rep: ATP-dependent RNA helicase DBP7
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 825
Score = 50.8 bits (116), Expect = 2e-05
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHIN--NQ-----------PPIRRGDGPIALVLAPTRELAQQI 434
++QTGSGKTLAY+LP + I NQ I R G +A+VLAPTREL +QI
Sbjct: 176 QAQTGSGKTLAYLLPIVNRILALNQNEDGTISKDASKKIHRNSGLLAIVLAPTRELCKQI 235
Query: 435 QQVAADFGHTS-YVRNTCVFGGAPKRSKPGTWRR 533
V + ++ +T V GG K S+ R+
Sbjct: 236 ATVLEKLLRCAPWIVSTTVIGGESKHSEKARIRK 269
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,193,038
Number of Sequences: 1657284
Number of extensions: 13671034
Number of successful extensions: 36844
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36039
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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