Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060627.seq
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 102 3e-22
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 85 3e-17
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 79 4e-15
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 75 6e-14
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 75 6e-14
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 74 8e-14
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 74 1e-13
08_01_0397 - 3509186-3510291,3510322-3512335 71 1e-12
03_05_0865 - 28365430-28367640 63 2e-10
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 61 6e-10
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 60 1e-09
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 60 1e-09
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 60 1e-09
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 59 2e-09
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 58 7e-09
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 58 7e-09
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 55 4e-08
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 54 7e-08
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 53 2e-07
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 48 4e-06
06_03_1255 + 28780181-28781172,28782065-28782932 48 6e-06
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 48 6e-06
02_01_0381 - 2764331-2764342,2768966-2769907 47 1e-05
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 47 1e-05
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 45 4e-05
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 44 1e-04
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 44 1e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 43 2e-04
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 43 2e-04
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 42 4e-04
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 42 5e-04
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 42 5e-04
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 41 9e-04
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 41 9e-04
03_02_0189 - 6253659-6255380 40 0.001
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 40 0.002
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 40 0.002
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 39 0.003
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 38 0.005
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 38 0.005
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 38 0.005
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 38 0.006
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 38 0.006
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 38 0.008
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 36 0.019
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 36 0.033
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 36 0.033
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 34 0.077
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 32 0.31
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 31 0.54
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 31 0.72
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 31 0.95
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 30 1.7
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 30 1.7
02_01_0091 + 646299-649082 29 2.9
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 28 5.1
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 5.1
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 28 6.7
10_08_0427 + 17828007-17828570,17829788-17829904,17830319-178303... 27 8.9
02_02_0319 - 8917042-8917122,8917628-8917680,8917754-8917800,891... 27 8.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 102 bits (244), Expect = 3e-22
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
+QTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG S R
Sbjct: 200 AQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTR 259
Query: 477 NTCVFGGAPK 506
+TC++GGAPK
Sbjct: 260 STCIYGGAPK 269
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +2
Query: 17 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 196
P D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 197 YVQQGVKTMGYKEPTPIQAQ 256
Y Q + G+ EPTPIQ+Q
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQ 185
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFL 580
Q RDL +GV IVIATPG LI L
Sbjct: 272 QIRDLRRGVEIVIATPGRLIDML 294
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 181 SKFS*LCATRCKDNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
+ F C +G S GWP+A+ G++++G+A+
Sbjct: 161 ANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQ 201
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 135 AETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 188
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 26 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQ 205
D L F KNFY P+V + EVE YR + E+TV G +V P++ F + FP+YV
Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 103
Query: 206 QGVKTMGYKEPTPIQAQ 256
Q + G+ EPTPIQ+Q
Sbjct: 104 QEITKAGFVEPTPIQSQ 120
Score = 29.9 bits (64), Expect = 1.7
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 250 SSGWPIAMSGKNLVGVAK 303
S GWP+A+ G++L+G+A+
Sbjct: 119 SQGWPMALRGRDLIGIAE 136
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG +S +
Sbjct: 194 AKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFGRSSRIS 252
Query: 477 NTCVFGGAPK 506
+TC++GGAPK
Sbjct: 253 STCLYGGAPK 262
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQAG--R*LCLE 280
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ+ C +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 281 RI*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWT 460
+ +A G + +G +L H + R L + ++ +F
Sbjct: 190 VVAIA-KTGSGKTLG-YLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
Query: 461 HILCS*HVCVWWCS*K-EQARDLEKGVXIVIATPGSL 568
S C++ + K Q RDL++GV +V+ATPG L
Sbjct: 248 SSRIS-STCLYGGAPKGPQLRDLDRGVDVVVATPGRL 283
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 74.5 bits (175), Expect = 6e-14
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKTL Y++PA +H+ N P + GP LVLAPTRELA QIQ A FG +S
Sbjct: 648 AKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPTRELASQIQDEAVKFGRSS 703
Query: 468 YVRNTCVFGGAPK 506
V TC++GG K
Sbjct: 704 RVSCTCLYGGTSK 716
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 35 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 211
S++P ++ F P+ P++ + YR HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 212 VKTMGYKEPTPIQAQ 256
+ G+ PTPIQAQ
Sbjct: 619 IHAAGFLNPTPIQAQ 633
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSL 568
Q R+LE+G IV+ATPG L
Sbjct: 719 QLRELERGADIVVATPGRL 737
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG +S +
Sbjct: 224 AKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFGRSSRIS 282
Query: 477 NTCVFGGAPK 506
+ C++GGAPK
Sbjct: 283 SVCLYGGAPK 292
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQAGR*LCLER- 283
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 284 I*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTH 463
I G + +G + K ++ R L + ++ +F
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFILLK-RLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRS 278
Query: 464 ILCS*HVCVWWCS*K-EQARDLEKGVXIVIATPGSL 568
S VC++ + K Q RDLE+G IV+ATPG L
Sbjct: 279 SRIS-SVCLYGGAPKGPQLRDLERGADIVVATPGRL 313
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP + H+ +QPP+ GDGPI L++APTREL QI F + +
Sbjct: 329 AKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKSLGIN 388
Query: 477 NTCVFGGA 500
++GG+
Sbjct: 389 CVAIYGGS 396
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + QPF KN Y + + EV YR E+ V G +V PI+ + ++
Sbjct: 236 DHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSK 295
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K +G+++P PIQAQA
Sbjct: 296 LLDTIKKLGFEKPMPIQAQA 315
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A++LP IVHI +QP + + +GPI +V APTRELA QI A F +R
Sbjct: 263 AKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLR 322
Query: 477 NTCVFGGAPK 506
V+GG K
Sbjct: 323 VAAVYGGVSK 332
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D ++ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ + GY++PT IQ QA
Sbjct: 230 LMNAIAKQGYEKPTTIQCQA 249
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFLGKXAQXNFTA 610
+Q ++L+ G IVIATPG LI L A F A
Sbjct: 334 DQFKELKAGCEIVIATPGRLIDLLKMKALKMFRA 367
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP + H+ +QP + GDGPI L++APTREL QI F +
Sbjct: 468 AKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGIN 527
Query: 477 NTCVFGGA 500
++GG+
Sbjct: 528 CVAIYGGS 535
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + QPF KNFY + K + EV YR + E+ V G +V PI+ + ++
Sbjct: 375 DHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSK 434
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ +K +G+++P IQAQA
Sbjct: 435 LLDTIKKLGFEKPMSIQAQA 454
>03_05_0865 - 28365430-28367640
Length = 736
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAADFGHTS 467
++TGSGKT A++LP + +I PPI +GP A+V+APTRELAQQI++ F
Sbjct: 359 AETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYL 418
Query: 468 YVRNTCVFGG 497
++ + GG
Sbjct: 419 GIKVVSIVGG 428
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQ 342
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
K+ R++TG+GKTLA+ +P + I + G P+A+VLAPTRELA+Q+++ +F
Sbjct: 136 KDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER---EF 192
Query: 456 GHTSYVRNTCVFGGAP 503
+S V CV+GG P
Sbjct: 193 SDSSNVETICVYGGTP 208
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 461
+QTGSGKT A+ P I I +++PP R RG P+AL+L+PTREL+ QI + A F +
Sbjct: 281 AQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAY 340
Query: 462 TSYVRNTCVFGGAP 503
+ VR +GGAP
Sbjct: 341 QTGVRVVVAYGGAP 354
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
V SG +V P+ F E + D + + ++ Y +PTP+Q A
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYA 267
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFL 580
+Q R+LE+GV I++ATPG L+ L
Sbjct: 357 QQLRELERGVEILVATPGRLMDLL 380
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPTRELAQQIQQVAADF 455
+QTGSGKT A+ P I I PP +R P+AL+L+PTREL+ QI + A F
Sbjct: 199 AQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKF 258
Query: 456 GHTSYVRNTCVFGGAP 503
+ + VR +GGAP
Sbjct: 259 SYQTGVRVVVAYGGAP 274
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFL 580
+Q RDLE+GV I++ATPG L+ L
Sbjct: 277 QQLRDLERGVDILVATPGRLVDLL 300
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
V SG EV P+ F E + + ++ Y PTP+Q A
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYA 185
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 449
++F + TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 450 DFGHTSYVRNTCVFGGAPK 506
+ G + + C++GG K
Sbjct: 189 EAGAPCGISSVCLYGGTSK 207
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGH 461
+QTGSGKT A+ P I I + PP RG P+AL+L+PTREL+ QI + A F +
Sbjct: 367 AQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAY 426
Query: 462 TSYVRNTCVFGGAP 503
+ V+ +GGAP
Sbjct: 427 QTGVKVVVAYGGAP 440
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 509 EQARDLEKGVXIVIATPGSLIGFL 580
+Q R+LE+GV I++ATPG L+ L
Sbjct: 443 QQLRELERGVEILVATPGRLMDLL 466
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
V SG +V P F E + D + + ++ Y +PTP+Q A
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYA 353
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINN--QPPIRRGD---GPIALVLAPTRELAQQIQQVAADFG 458
R++TG GKTLA++LP + + N RR D P LVL PTRELA+Q+ A +G
Sbjct: 147 RARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYG 206
Query: 459 HTSYVRNTCVFGGAPKRSK 515
T + CV+GG+ RS+
Sbjct: 207 ATFGLSACCVYGGSDYRSQ 225
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
K+ R++TG+GKTLA+ +P + I + G P+A++LAPTRELA+Q+++ +F
Sbjct: 131 KDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK---EF 187
Query: 456 GHTSYVRNTCVFGGAP 503
++ + + CV+GG P
Sbjct: 188 KESAPLDSLCVYGGVP 203
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSY 470
+ TGSGKT ++++P I H ++ R D GP+A+VLAPTREL Q+++ A G
Sbjct: 226 ADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLP 285
Query: 471 VRNTCVFGGAP 503
+ V GG P
Sbjct: 286 FKTALVVGGDP 296
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 101 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQ 211
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
++ TG+GKTLAY+ P IVH+ +P + R DG ALVL PTREL Q+ +A H
Sbjct: 67 KAATGTGKTLAYLAP-IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVH 123
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 506 KEQARDLEKGVXIVIATPGSLIGFL 580
KE+AR L KG+ I+IATPG L+ L
Sbjct: 141 KEKAR-LRKGISILIATPGRLLDHL 164
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQVAADFGHT 464
R++TG+GKTLA+ +P I + + +RRG P LVLAPTRELA+Q+++ +
Sbjct: 173 RAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKE--SA 230
Query: 465 SYVRNTCVFGG 497
+ CV+GG
Sbjct: 231 PKLSTVCVYGG 241
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Frame = +3
Query: 243 PFKLRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIA-LVLAPT 413
P+ + + Y+ K+ +++TG+GKT+A++LPAI ++ PPI + PI+ +V+ PT
Sbjct: 481 PYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPT 540
Query: 414 RELAQQ 431
RELA Q
Sbjct: 541 RELADQ 546
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 455
TGSGKTL ++LP I+ + PI G+GP L++ P+RELA+Q +V F
Sbjct: 219 TGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHEVIEMF 272
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 74 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 251 AQ 256
Q
Sbjct: 201 VQ 202
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 482 VCVWWCS*KEQARDLEKGVXIVIATPGSLIGFLGK 586
+C+ + Q ++KGV IV+ATPG L L K
Sbjct: 288 LCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLLSK 322
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
K+ + + TGSGKTLA+++P + + +P + + ++++PTREL+ QI VA F
Sbjct: 61 KDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPF 119
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF 455
TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q V F
Sbjct: 228 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 281
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 74 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 251 AQ 256
Q
Sbjct: 210 VQ 211
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 25/93 (26%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI----------VHINNQPP-----IRRGDG----------PIALV 401
S TGSGKTLAY+LP + + INN P +RR + P A+V
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIENTYRLLPINNGVPANQKLLRRDEAMLGMSMKPRRPRAVV 213
Query: 402 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 500
L PTREL +Q+ +VA H + R+T V GG+
Sbjct: 214 LCPTRELTEQVFRVAKSISHHARFRSTMVSGGS 246
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A+++P I + G G AL+L+PTR+LA Q + A G + ++
Sbjct: 70 ARTGSGKTAAFLVPMIQRLRRHDA---GAGIRALILSPTRDLATQTLKFAQQLGKFTDLK 126
Query: 477 NTCVFGGAPKRSK 515
+ + GG S+
Sbjct: 127 ISLIVGGDSMESQ 139
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 173 FEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
FE + V +GV+ GY+ PTPIQ +A
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKA 56
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 452
K+ ++TGSGKTLA+++PAI +++ + R +G +V+ PTRELA Q VA +
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPTRELAIQTHNVAKE 190
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 449
K+ +++TGSGKT AY+LP ++ ++ + IR+ P +L PTREL QQ+ A+
Sbjct: 121 KDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPTRELCQQVHNEAS 179
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 300 QTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVAADFGHTSYV 473
QTGSGKT A+ LP I Q + P A VLAPTRELA QI + G +
Sbjct: 28 QTGSGKTAAFALPII-----QALLEHEHRPCFFACVLAPTRELAIQIAKQFEALGSAISL 82
Query: 474 RNTCVFGGAPKRSK 515
+ + + GG P+ S+
Sbjct: 83 QCSVLIGGIPRTSQ 96
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT A+ LP I+H + P G AL LAPTRELA Q+ + G +R
Sbjct: 121 AETGSGKTAAFALP-ILHRLGEDPY----GVAALALAPTRELAAQLAEQFRALGAPLGLR 175
Query: 477 NTCVFGG 497
GG
Sbjct: 176 CLAAIGG 182
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 434
+++TG+GKT+A++LPAI ++ P R LV+ PTRELA Q+
Sbjct: 117 KAKTGTGKTVAFLLPAIELLSTLP---RSPSINLLVICPTRELANQV 160
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 482
TGSGKT A+ LP + + +P +R L+L PTRELA Q+ + + +R
Sbjct: 240 TGSGKTAAFSLPVLERLLFRP--KRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCC 297
Query: 483 CVFGG 497
+ GG
Sbjct: 298 LIVGG 302
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 452
++TGSGKTLA+++PAI + P R G G +VL PTRELA Q VA +
Sbjct: 130 AKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCPTRELAIQTHNVAKE 180
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLIGFLGK 586
+A L KG+ +++ATPG L+ + K
Sbjct: 201 EAEQLAKGINVLVATPGRLLDHMQK 225
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 40.7 bits (91), Expect = 9e-04
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +3
Query: 300 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 479
QTGSGKT A+ LP I + Q + A VL+PTRELA QI Q G +
Sbjct: 86 QTGSGKTGAFALPIIQALLKQD---KPQALFACVLSPTRELAFQIGQQFEALGSAIGLSC 142
Query: 480 TCVFGGAPK 506
T + GG +
Sbjct: 143 TVLVGGVDR 151
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQI 434
K+ +++TG+GKT+A++LPAI ++ P RR LV+ PTRELA Q+
Sbjct: 44 KDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQV 98
>03_02_0189 - 6253659-6255380
Length = 573
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHIN--NQPPIRRG----DGPIALVLAPTRELAQQI 434
+S TGSGKTLAY+LP + I +P + G G A+++AP+REL QI
Sbjct: 174 QSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQI 226
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQI 434
+S TGSGKTLAY+LP + I Q + G A+++AP+REL QI
Sbjct: 636 QSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQI 688
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
+QTGSGKTLAY+L I+ + ++ ALV+ PTREL Q+ +VA +
Sbjct: 85 AQTGSGKTLAYLLSVFSAIDFGRSSVQ------ALVVVPTRELGMQVTKVARILAAKACT 138
Query: 474 RNTCVFGGAPKRSK 515
+ GG +R K
Sbjct: 139 VMALLDGGMLRRQK 152
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
R++ G+GKT A+ +PA+ I+ + + ++L PTRELA Q QV + G +
Sbjct: 177 RAKNGTGKTAAFCIPALEKIDQEKNAIQ-----VVILVPTRELALQTSQVCKELGKHLKI 231
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 232 QVMVTTGG 239
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 431
TGSGKTLA++ P ++ I +P + +G A++L PTRELA Q
Sbjct: 192 TGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTRELAAQ 230
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 116 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQA 259
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ QA
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQA 176
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
R++ G+GKT A+ +PA+ I+ + ++L PTRELA Q QV + G +
Sbjct: 167 RAKNGTGKTAAFCIPALEKIDQDKNAIQ-----VVILVPTRELALQTSQVCKELGKHLKI 221
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 222 QVMVTTGG 229
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 443
S TGSGKTLAY LP + + R+ ALV+ PTR+LA Q+++V
Sbjct: 81 SPTGSGKTLAYALPIVQML----ATRKVRCLRALVVLPTRDLALQVKEV 125
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 300 QTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAPTRELAQQI 434
Q+GSGKTLAY+ P + ++ + + R P +VL PT ELA Q+
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQI 434
K+ +++TG+GK+ A++LPAI + N + PI +L+L PTRELA Q+
Sbjct: 380 KDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQL 434
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
R++ G+GKT A+ +PA+ I+ + + ++L PTRELA Q QV + G
Sbjct: 190 RAKNGTGKTAAFCIPALEKIDPEKNAIQ-----VVILVPTRELALQTSQVCKELG 239
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 276 WKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 455
+K+ ++ GSGKT ++L + ++ + + A+ + PTRELAQQ + V
Sbjct: 140 YKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQ-----AICICPTRELAQQNKSVLMRM 194
Query: 456 GHTSYVRNTCVFGGAPKRSKP 518
G + + C A K P
Sbjct: 195 GKFTGITCACAIPPAQKDYVP 215
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 393 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKR 509
ALVLAPTRELAQQI++V G V+ GG R
Sbjct: 112 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 150
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 479 HVCVWWCS*KEQARDLEKGVXIVIATPGSLIGFL 580
H CV S +E R L GV +V+ TPG + L
Sbjct: 141 HACVGGTSVREDQRILASGVHVVVGTPGRVFDML 174
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 35.5 bits (78), Expect = 0.033
Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIV-----------HINNQPPIRRGDGPIALVLAPTRELAQQ 431
+QTGSGKT A+ LP + H R P ALVLAPTRELA Q
Sbjct: 128 AQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQ 183
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
V VSG +V P FE A + V + V GY+ PTP+Q
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQ 111
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 512 QARDLEKGVXIVIATPGSLI 571
Q RDLE+G I++ATPG L+
Sbjct: 236 QLRDLERGADILVATPGRLV 255
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 393 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKR 509
+LVLAPTRELAQQI++V G V+ GG R
Sbjct: 112 SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 150
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 479 HVCVWWCS*KEQARDLEKGVXIVIATPGSLIGFL 580
H CV S +E R L GV +V+ TPG + L
Sbjct: 141 HACVGGTSVREDQRILASGVHVVVGTPGRVFDML 174
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI---------NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 446
++TGSGKT Y++P I + N + G IALVL P L +Q+ ++A
Sbjct: 126 AETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVTSGSPNIALVLCPNVMLCEQVVRMA 184
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 31.5 bits (68), Expect = 0.54
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Frame = +3
Query: 261 ADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPP----IRRGD----------GPI-A 395
A ++ K+ ++TGSGKTLA+ LP + + + + R D P+ A
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRA 234
Query: 396 LVLAPTRELAQQI 434
L+L PTRELA+Q+
Sbjct: 235 LILTPTRELAKQV 247
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 31.1 bits (67), Expect = 0.72
Identities = 40/162 (24%), Positives = 62/162 (38%)
Frame = +2
Query: 77 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
T +R P +++ E T GVEV I F++ D + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQR 60
Query: 257 AGR*LCLERI*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNS 436
A + R +A + S C TA E L + ++
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLSVCQIV-DTAVRE---VQALILSPTRELAAQTE 116
Query: 437 ASCCRFWTHILCS*HVCVWWCS*KEQARDLEKGVXIVIATPG 562
I H C+ S E R LE GV +V TPG
Sbjct: 117 RVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPG 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++Q+G+GKT L ++ +R AL+L+PTRELA Q ++V G +
Sbjct: 74 QAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALILSPTRELAAQTERVMLAIGDFINI 128
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 129 QVHACIGG 136
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 30.7 bits (66), Expect = 0.95
Identities = 39/162 (24%), Positives = 63/162 (38%)
Frame = +2
Query: 77 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 256
T +R P +++ E T GVEV I F++ + + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQR 60
Query: 257 AGR*LCLERI*LA*PNGFRQNVGLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSXTNS 436
A + R +A + S C TA E L + ++
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLSVCQIV-DTAVRE---VQALILSPTRELAAQTE 116
Query: 437 ASCCRFWTHILCS*HVCVWWCS*KEQARDLEKGVXIVIATPG 562
+I H C+ S E R LE GV +V TPG
Sbjct: 117 RVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPG 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++Q+G+GKT L ++ +R AL+L+PTRELA Q ++V G +
Sbjct: 74 QAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALILSPTRELAAQTERVMLAIGDYINI 128
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 129 QVHACIGG 136
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 434
++++G GKT ++L ++ I+ P+ G ALVL TRELA QI
Sbjct: 79 QAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQI 120
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 434
++++G GKT ++L ++ I+ P+ G ALVL TRELA QI
Sbjct: 66 QAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQI 107
>02_01_0091 + 646299-649082
Length = 927
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 428
+ T SGK+L Y +P + I+ + P AL + PT+ LAQ
Sbjct: 209 TSTSSGKSLCYNIPVLESIS------QSSAPCALYIFPTKALAQ 246
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 326 GQRFAGTRLATPTKFF-PDIAIGQPELEWASVLCNPLS 216
GQ F G + + + + A G P L W +L NP+S
Sbjct: 80 GQAFKGLDILSLSNLMRQENASGSPSLSWGEILTNPIS 117
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 92 SPYEVEEYRNKHEVTVSGVEVHN 160
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIV 347
++TGSGKTLA+++P ++
Sbjct: 124 AKTGSGKTLAFVIPVLM 140
>10_08_0427 +
17828007-17828570,17829788-17829904,17830319-17830384,
17831466-17831572,17831939-17832017,17832861-17833574,
17834040-17834148,17834263-17834429,17834876-17834950,
17835025-17835117,17835202-17835294
Length = 727
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 226 LQRTDAHSSSGWPIAMSGKNLVGVAKRVPAKR 321
++R + S WP+A +GK+ G+ KRV ++R
Sbjct: 120 VRRWSEYVGSHWPLAPAGKD-AGLGKRVESRR 150
>02_02_0319 -
8917042-8917122,8917628-8917680,8917754-8917800,
8917901-8917992,8919725-8920060,8920370-8920423,
8920547-8920879,8921133-8921207,8921293-8921441,
8922411-8922429
Length = 412
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 487 CLVVLLKGASPGLGEGSXNSHCYSR*FNWFP 579
C+ +L+G +PGLG N +C S + FP
Sbjct: 139 CMKAVLEGKAPGLGSMHANPNCMSP-YGCFP 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,700,578
Number of Sequences: 37544
Number of extensions: 384632
Number of successful extensions: 1019
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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