Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060627.seq
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    50   4e-08
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    27   0.63 
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   4.4  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   4.4  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    23   5.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   5.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 50.4 bits (115), Expect = 4e-08
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
 Frame = +3

Query: 297 SQTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSY 470
           +QTGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + 
Sbjct: 218 AQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTK 277

Query: 471 VRNTCVFGG 497
           ++    +GG
Sbjct: 278 LKVCVSYGG 286



 Score = 31.9 bits (69), Expect = 0.017
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 128 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ  A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYA 204



 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 506 KEQARDLEKGVXIVIATPGSLIGFLGK 586
           + Q + +  G  +++ATPG L+ F+ +
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFIDR 316


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 276 WKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG 386
           +K  ++++Q  + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 489 THTCYEHKMCVQNLQQLAEFVXLTL 415
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 489 THTCYEHKMCVQNLQQLAEFVXLTL 415
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 208 RCKDNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
           RC  +  +R+  +S  GW     GK L GVA+
Sbjct: 107 RCARSIYRRSFFNSWEGWRNNCQGKQLPGVAE 138


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 80  VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 172
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,919
Number of Sequences: 2352
Number of extensions: 14763
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)