Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060627.seq
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 94 8e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 78 6e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 75 3e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 65 3e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 5e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 7e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 7e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 7e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 47 9e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 47 9e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 47 9e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 45 5e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 45 5e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 3e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 40 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.001
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 0.002
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.006
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.092
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.092
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.092
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.16
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.49
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 0.86
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 1.5
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 1.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/70 (60%), Positives = 56/70 (80%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLK 232
Query: 477 NTCVFGGAPK 506
TC+FGGA K
Sbjct: 233 MTCLFGGASK 242
Score = 63.7 bits (148), Expect = 1e-10
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Frame = +2
Query: 2 GTRRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 181
G R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F E
Sbjct: 75 GRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNE 134
Query: 182 ANFPDYVQQGVKTMGYKEPTPIQ------AQAGR*LCLERI*LA*PNGFRQNVGLHLASN 343
A P + + + +++PT IQ A +GR + I +A G + + L +
Sbjct: 135 APLPGQIHELLYGK-FQKPTVIQSISWPIAMSGR----DIISIA-KTGSGKTLAFMLPA- 187
Query: 344 CAHK*PTAYSER*WSDCFGLGAYQRVSXTNSASCCRFWTHILCS*HVCVWWCS*K-EQAR 520
H A+ +R + R + H L C++ + K QAR
Sbjct: 188 LVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQAR 247
Query: 521 DLEKGVXIVIATPGSLIGFL 580
DLE+GV IV+ATPG L+ FL
Sbjct: 248 DLERGVDIVVATPGRLLDFL 267
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 229 QRTDAHSSSGWPIAMSGKNLVGVAK 303
Q+ S WPIAMSG++++ +AK
Sbjct: 150 QKPTVIQSISWPIAMSGRDIISIAK 174
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 477 NTCVFGGAPK 506
C +GG K
Sbjct: 369 PICAYGGGSK 378
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 199
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 200 VQQGVKTMGYKEPTPIQAQA 259
+ + ++ Y++PTPIQA A
Sbjct: 276 LMEAIRKSEYEQPTPIQAMA 295
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLK 407
Query: 477 NTCVFGG 497
C +GG
Sbjct: 408 VACTYGG 414
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPD 196
D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 254 DHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNL 313
Query: 197 YVQQGVKTMGYKEPTPIQAQA 259
+ +K Y +PT IQAQA
Sbjct: 314 KMMNVLKKFEYSKPTSIQAQA 334
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHT 464
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 465 SYVRNTCVFGGAPKRSK 515
++ V GGA + +
Sbjct: 405 LGIKTVSVIGGASREDQ 421
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 113 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ QA
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 506 KEQARDLEKGVXIVIATPGSLIGFL 580
++Q L GV +VIATPG L+ L
Sbjct: 419 EDQGMKLRMGVEVVIATPGRLLDVL 443
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 458
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 459 HTSYVRNTCVFGGAPK 506
+ Y ++ C++GG +
Sbjct: 188 YNGY-KSVCLYGGGSR 202
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 214 KDNGLQRTDAHSSSGWPIAMSGKNLVGVAK 303
+ NG ++ S WP+ +SG++ +GV++
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S ++ ++GG
Sbjct: 243 TKFSYKSNIQTAILYGG 259
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
++Y N V VSG V I++F EA F V + V GY +PTP+Q
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQ 166
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S ++ ++GG
Sbjct: 227 TKFSYKSNIQTAILYGG 243
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
++Y N V VSG V I++F EA F V + V GY +PTP+Q
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQ 150
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 446
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 447 ADFGHTSYVRNTCVFGG 497
F + S ++ ++GG
Sbjct: 224 TKFSYKSNIQTAILYGG 240
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 107 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
++Y N V VSG V I++F EA F V + V GY +PTP+Q
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQ 147
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 477 NTCVFGG 497
C+ GG
Sbjct: 124 CACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 477 NTCVFGG 497
C+ GG
Sbjct: 124 CACLVGG 130
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 434
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 482 VCVWWCS*KEQARDLEKGVXIVIATPGSLIGFLGK 586
+C+ EQA+D+ G+ IV+ATPG L L K
Sbjct: 305 LCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTK 339
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 445 TMMEIKPVYGG 455
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 161 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
P + F EAN + +Q+ V GY + TPIQ A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYA 371
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 445 TMMEIKPVYGG 455
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 161 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
P + F EAN + +Q+ V GY + TPIQ A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYA 371
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 465 SYVRNTCVFGG 497
S + V+GG
Sbjct: 402 SVMEIKPVYGG 412
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
P + F +++ P +++ V+ GY TPIQ
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQ 325
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 465 SYVRNTCVFGG 497
S + V+GG
Sbjct: 402 SVMEIKPVYGG 412
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
P + F +++ P +++ V+ GY TPIQ
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQ 325
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQ 444
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 445 TMMEIKPVYGG 455
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 161 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQA 259
P + F EAN + +Q+ V GY + TPIQ A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYA 371
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 656 TMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 656 TMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHT 464
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQ 655
Query: 465 SYVRNTCVFGG 497
+ + V+GG
Sbjct: 656 TMMEIRPVYGG 666
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 440
+++T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ ++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
Query: 459 HTSYVRNTCVFGGAPKR 509
V GG R
Sbjct: 122 EYLNVNILPCIGGTSVR 138
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
K+ ++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
Query: 459 HTSYVRNTCVFGGAPKR 509
V GG R
Sbjct: 122 EYLNVNILPCIGGTSVR 138
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 112 AKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLT 170
Query: 477 NTCVFGGAPKRSK 515
V GG+ + ++
Sbjct: 171 YGLVMGGSNRSAE 183
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
S TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLT 110
Query: 477 NTCVFGG 497
V GG
Sbjct: 111 VETVTGG 117
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 279 KEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 443
K R++TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQV 443
+QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 444 AADFGHTSYVRNTCVFGG 497
+ F + + + + ++GG
Sbjct: 270 SRKFAYRTPITSALLYGG 287
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 131 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 250
V +G +V PI F + + +++++ +KT GY PTP+Q
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQ 193
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 477 NTCVFGG 497
+ + GG
Sbjct: 188 CSVIVGG 194
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 476
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 477 NTCVFGG 497
+ + GG
Sbjct: 188 CSVIVGG 194
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 92
Query: 459 HTSYVRNTCVFGG 497
T+ + T + GG
Sbjct: 93 STTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 459 HTSYVRNTCVFGG 497
T+ + T + GG
Sbjct: 260 STTQLIATSIVGG 272
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
R++ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 474 RNTCVFGGAPKR 509
+ GG R
Sbjct: 141 KVMVTTGGTDLR 152
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 462 TSYVRNTCVFGG 497
+ ++ FGG
Sbjct: 840 ETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 461
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q A +
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY 839
Query: 462 TSYVRNTCVFGG 497
+ ++ FGG
Sbjct: 840 ETGLKCGLAFGG 851
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 124 QCHACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 474 RNTCVFGG 497
+ GG
Sbjct: 124 QCHACIGG 131
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 443
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 440
++TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 88 AETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.070
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 303 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 431
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 458
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 297 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 431
++TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 120 AKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 246 FKLRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 425
F++R ++ + + TGSGKT+ Y+LP + + ++P A++L P + L
Sbjct: 146 FEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLV 201
Query: 426 QQIQQVAADFGHTSYVRNTCVFGGA 500
QI + S V GA
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGA 226
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 303 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 434
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 249 KLRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 428
K +A K+ + +SQ GSGKT+ ++ + I+ + + ++LAP R +AQ
Sbjct: 24 KSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQ 78
Query: 429 QIQQVAADFGHTSYVRNTCV 488
+ + G V TC+
Sbjct: 79 RAHEQLKSLGRNLNVNATCL 98
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGAR 119
Query: 474 RNTCVFGGAPK 506
+ V G A K
Sbjct: 120 TSVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +3
Query: 294 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 473
++++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGAR 119
Query: 474 RNTCVFGGAPK 506
+ V G A K
Sbjct: 120 TSVYVGGSAHK 130
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 303 TGSGKTLAYILPAIVH 350
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 68 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 226
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 68 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 226
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 336 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQV 443
P + ++ +P + DG P A+++APT+EL QI ++
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,945,100
Number of Sequences: 27780
Number of extensions: 325494
Number of successful extensions: 861
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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