Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060626.seq
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 156 8e-38
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 156 8e-38
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 156 8e-38
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 156 8e-38
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 153 6e-37
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 147 4e-35
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 38 0.044
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.8
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.8
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.8
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 31 3.8
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 31 3.8
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 31 3.8
AL031703-1|CAC42094.1| 808|Homo sapiens c302G6.1 (calcium chann... 31 3.8
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 31 3.8
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 31 3.8
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 31 3.8
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 31 3.8
AF223562-1|AAF60162.1| 238|Homo sapiens low-voltage-activated c... 31 3.8
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 31 3.8
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 31 3.8
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 31 3.8
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 156 bits (378), Expect = 8e-38
Identities = 74/122 (60%), Positives = 84/122 (68%)
Frame = +1
Query: 247 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 426
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 427 PIDDSVEGLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVA 606
PIDD+VEG+TGNLFEVYLKPYF+EAYR G FKVVETD SP+CIVA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 607 XD 612
D
Sbjct: 178 PD 179
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +2
Query: 86 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 265
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 266 ARK 274
R+
Sbjct: 64 RRE 66
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 180 TVIHCEGEPIKREDEEES 197
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 156 bits (378), Expect = 8e-38
Identities = 74/122 (60%), Positives = 84/122 (68%)
Frame = +1
Query: 247 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 426
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 427 PIDDSVEGLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVA 606
PIDD+VEG+TGNLFEVYLKPYF+EAYR G FKVVETD SP+CIVA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 607 XD 612
D
Sbjct: 178 PD 179
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +2
Query: 86 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 265
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 266 ARK 274
R+
Sbjct: 64 RRE 66
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 180 TVIHCEGEPIKREDEEES 197
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 156 bits (378), Expect = 8e-38
Identities = 74/122 (60%), Positives = 84/122 (68%)
Frame = +1
Query: 247 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 426
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 427 PIDDSVEGLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVA 606
PIDD+VEG+TGNLFEVYLKPYF+EAYR G FKVVETD SP+CIVA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 607 XD 612
D
Sbjct: 178 PD 179
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +2
Query: 86 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 265
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 266 ARK 274
R+
Sbjct: 64 RRE 66
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 180 TVIHCEGEPIKREDEEES 197
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 156 bits (378), Expect = 8e-38
Identities = 74/122 (60%), Positives = 84/122 (68%)
Frame = +1
Query: 247 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 426
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 427 PIDDSVEGLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVA 606
PIDD+VEG+TGNLFEVYLKPYF+EAYR G FKVVETD SP+CIVA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 607 XD 612
D
Sbjct: 178 PD 179
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +2
Query: 86 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 265
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 266 ARK 274
R+
Sbjct: 64 RRE 66
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 180 TVIHCEGEPIKREDEEES 197
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 153 bits (371), Expect = 6e-37
Identities = 73/122 (59%), Positives = 83/122 (68%)
Frame = +1
Query: 247 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 426
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 427 PIDDSVEGLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVA 606
PIDD+VEG+TGNLFEVYLKPYF+EAYR G FKVVET SP+CIVA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVA 177
Query: 607 XD 612
D
Sbjct: 178 PD 179
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +2
Query: 86 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 265
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 266 ARK 274
R+
Sbjct: 64 RRE 66
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 180 TVIHCEGEPIKREDEEES 197
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 147 bits (356), Expect = 4e-35
Identities = 70/115 (60%), Positives = 78/115 (67%)
Frame = +1
Query: 268 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 447
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 448 GLTGNLFEVYLKPYFMEAYRRSIVTTPSWSAGACAPSSFKVVETDXSPFCIVAXD 612
G+TGNLFEVYLKPYF+EAYR G FKVVETD SP+CIVA D
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 117
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 118 TVIHCEGEPIKREDEEES 135
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.044
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 614 TVIHCDGEPIKREEEEGS 667
TVIHC+GEPIKRE+EE S
Sbjct: 18 TVIHCEGEPIKREDEEES 35
Score = 33.9 bits (74), Expect = 0.54
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 562 FKVVETDXSPFCIVAXD 612
FKVVETD SP+CIVA D
Sbjct: 1 FKVVETDPSPYCIVAPD 17
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AL031703-1|CAC42094.1| 808|Homo sapiens c302G6.1 (calcium channel,
voltage-dependent, alpha 1H subunit) protein.
Length = 808
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 467 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 507
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 476 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 516
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 469 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 290
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 289 ARCKRFPCGVCPEQD 245
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AF223562-1|AAF60162.1| 238|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit protein.
Length = 238
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 53 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 93
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 476 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 516
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel
alpha 1H subunit protein.
Length = 2353
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 476 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 516
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 455 LAIYSKYT*SRTSWRLTVDPS*RHLHGPRGHARRRVSKWSKQXHH 589
L +Y+++ ++ WR VDPS GP GH +RR + + HH
Sbjct: 496 LRLYARW---QSRWRKKVDPSAVQGQGP-GHRQRRAGRHTASVHH 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,830,418
Number of Sequences: 237096
Number of extensions: 2035167
Number of successful extensions: 3899
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3883
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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