Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060625.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 476 PFLMKCSKRPKIICKQPN 423
           PF + C+ RPK+   QP+
Sbjct: 87  PFNIDCTSRPKLQEPQPS 104


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 567 RIMHRSVPAELVLVC 611
           R++HR + A  VLVC
Sbjct: 612 RVVHRDLAARNVLVC 626


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 276 EPMGKAFVESPASIILTASSKV 211
           +P    +VES ASII  A++KV
Sbjct: 55  DPHVNEYVESLASIIDEAATKV 76


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 276 EPMGKAFVESPASIILTASSKV 211
           +P    +VES ASII  A++KV
Sbjct: 369 DPHVNEYVESLASIIDEAATKV 390


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 276 EPMGKAFVESPASIILTASSKV 211
           +P    +VES ASII  A++KV
Sbjct: 602 DPHVNEYVESLASIIDEAATKV 623


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 276 EPMGKAFVESPASIILTASSKV 211
           +P    +VES ASII  A++KV
Sbjct: 602 DPHVNEYVESLASIIDEAATKV 623


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,055
Number of Sequences: 336
Number of extensions: 3530
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)