Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060625.seq
(687 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 27 0.73
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 26 0.97
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 26 0.97
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 26 0.97
AY333996-1|AAR01121.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333995-1|AAR01120.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333994-1|AAR01119.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333993-1|AAR01118.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333992-1|AAR01117.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333991-1|AAR01116.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY333990-1|AAR01115.1| 245|Anopheles gambiae arrestin protein. 25 3.0
AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein. 25 3.0
AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein. 25 3.0
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 24 5.2
AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical prote... 23 6.8
AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosens... 23 6.8
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 6.8
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 23 9.0
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 26.6 bits (56), Expect = 0.73
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 673 RVNESIHNHFAQTNKFFHRFRQTSTNSAGTLRCIILCT*VITQNLLYHHPTASLLG*T 500
+VN + +H QT FH TNSA L I C + ++ H T++++G T
Sbjct: 3055 KVNPYLKHHKRQTKTPFHITNCFRTNSADNLN-TITCYEQHGLSYVFPHNTSNIIGIT 3111
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.97
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 266 PIGSAPAKRRASTITS-VKCWSKSTRWFPSAC 358
P+G P+ +R+S+ + CW + FP C
Sbjct: 128 PLGILPSNQRSSSSSKPTPCWESNKDVFPKPC 159
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.97
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 266 PIGSAPAKRRASTITS-VKCWSKSTRWFPSAC 358
P+G P+ +R+S+ + CW + FP C
Sbjct: 128 PLGILPSNQRSSSSSKPTPCWESNKDVFPKPC 159
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 26.2 bits (55), Expect = 0.97
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 266 PIGSAPAKRRASTITS-VKCWSKSTRWFPSAC 358
P+G P+ +R+S+ + CW + FP C
Sbjct: 128 PLGILPSNQRSSSSSKPTPCWESNKDVFPKPC 159
>AY333996-1|AAR01121.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333995-1|AAR01120.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333994-1|AAR01119.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333993-1|AAR01118.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333992-1|AAR01117.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333991-1|AAR01116.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY333990-1|AAR01115.1| 245|Anopheles gambiae arrestin protein.
Length = 245
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 89 NICIRNNSNKMVKKIKAMVQQGV 111
>AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 217 NICIRNNSNKMVKKIKAMVQQGV 239
>AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 554 NLCAQNNASKRARRIGARLSEAV 622
N+C +NN++K ++I A + + V
Sbjct: 217 NICIRNNSNKMVKKIKAMVQQGV 239
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 75 EVHDVYGESYHHHRIVQEYLSESYVNDMSCIERDVTAMRV 194
E+H + + H +++ +S S ++ +SCIER++ M++
Sbjct: 122 ELHTYTKDRNNVHAPIKK-MSVSILSALSCIERELLTMKL 160
>AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical protein
protein.
Length = 191
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 45 IIYNYYAKYNEVHDVYGESYHHHRIVQEYL 134
+ Y+Y +Y + + + S +HR +EYL
Sbjct: 97 LYYDYPDQYRALRERWDPSGEYHRRFEEYL 126
>AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosensory
protein CSP5 protein.
Length = 191
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 45 IIYNYYAKYNEVHDVYGESYHHHRIVQEYL 134
+ Y+Y +Y + + + S +HR +EYL
Sbjct: 97 LYYDYPDQYRALRERWDPSGEYHRRFEEYL 126
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.4 bits (48), Expect = 6.8
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = +1
Query: 169 SGT*PLC--AFEDRQLHL*R----SGQDDRRGRFHKSLSHWFSTGETTGIDDNVRKVLEQ 330
+G P+C ED ++H R S + R+ +++ W +T + DN + +
Sbjct: 849 AGLVPICRAVAEDTRVHSRRGTGVSSSELRKEERQRTIEEWQTTWDADAAADNASRYVRW 908
Query: 331 IDAVVP 348
V+P
Sbjct: 909 AHLVIP 914
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 87 VYGESYHHHRIV 122
+YG SYH H++V
Sbjct: 208 MYGPSYHRHQLV 219
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,620
Number of Sequences: 2352
Number of extensions: 16181
Number of successful extensions: 39
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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