Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060625.seq
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p pro...    29   6.0  
AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched p...    29   6.0  
AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA ...    29   6.0  

>BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p
           protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 150 LRTILIGIPELYGDGDTTRHTRRAPHCI*HNNCKLLTL 37
           L T+L+G  E + D     H    PHC     CK L +
Sbjct: 334 LHTLLLGCYEYFHDLKMDNHCNEIPHCRAPEECKRLNI 371


>AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched
           protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 150 LRTILIGIPELYGDGDTTRHTRRAPHCI*HNNCKLLTL 37
           L T+L+G  E + D     H    PHC     CK L +
Sbjct: 334 LHTLLLGCYEYFHDLKMDNHCNEIPHCRAPEECKRLNI 371


>AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA
           protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 150 LRTILIGIPELYGDGDTTRHTRRAPHCI*HNNCKLLTL 37
           L T+L+G  E + D     H    PHC     CK L +
Sbjct: 334 LHTLLLGCYEYFHDLKMDNHCNEIPHCRAPEECKRLNI 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,674,173
Number of Sequences: 53049
Number of extensions: 686728
Number of successful extensions: 1714
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)