Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060624.seq
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 169 2e-43
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 169 3e-43
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 169 3e-43
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 97 3e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 90 3e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 75 1e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.002
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.007
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.007
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.016
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.029
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 31 0.12
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.20
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.27
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 30 0.35
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.46
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 29 0.46
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 29 0.81
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 28 1.4
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 27 2.5
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 2.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.3
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 26 5.7
SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces p... 25 7.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 7.6
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 10.0
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 169 bits (412), Expect = 2e-43
Identities = 82/139 (58%), Positives = 99/139 (71%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLA+TLGVKQLIV VNKMD+T + ++ + +++ FVP+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFVPVSG 193
Query: 617 MARRQHVGASTKMPWFKGW 673
+ +T MPW++GW
Sbjct: 194 FQGDNMIEPTTNMPWYQGW 212
Score = 151 bits (366), Expect = 9e-38
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 169 bits (411), Expect = 3e-43
Identities = 81/139 (58%), Positives = 99/139 (71%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLA+TLGVKQLIV VNKMD+T + ++ + +++ FVP+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFVPVSG 193
Query: 617 MARRQHVGASTKMPWFKGW 673
+ +T MPW++GW
Sbjct: 194 FQGDNMIEPTTNMPWYQGW 212
Score = 151 bits (366), Expect = 9e-38
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 169 bits (411), Expect = 3e-43
Identities = 81/139 (58%), Positives = 99/139 (71%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLA+TLGVKQLIV VNKMD+T + ++ + +++ FVP+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFVPVSG 193
Query: 617 MARRQHVGASTKMPWFKGW 673
+ +T MPW++GW
Sbjct: 194 FQGDNMIEPTTNMPWYQGW 212
Score = 151 bits (366), Expect = 9e-38
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 96.7 bits (230), Expect = 3e-21
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 448
FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+L
Sbjct: 311 FETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVL 370
Query: 449 AFTLGVKQLIVGVNKMD 499
A T G+ L+V +NKMD
Sbjct: 371 ARTQGINHLVVVINKMD 387
Score = 85.4 bits (202), Expect = 7e-18
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 224
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 225 AERELGITIDL 257
ERE G T+++
Sbjct: 296 EEREKGKTVEV 306
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 89.8 bits (213), Expect = 3e-19
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 448
FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L
Sbjct: 250 FESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYL 309
Query: 449 AFTLGVKQLIVGVNKMD 499
LG+ +++V VNK+D
Sbjct: 310 LRALGISEIVVSVNKLD 326
Score = 81.4 bits (192), Expect = 1e-16
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 224
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 225 AERELGITIDLLS 263
ER G+T+D+ S
Sbjct: 235 EERARGVTMDVAS 247
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 514 YSEPRFEEIKKEVSSY-IKKIGYNPAAVRF 600
+SE RF+EIK VS + IK +G+ + V F
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHF 359
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 74.5 bits (175), Expect = 1e-14
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +2
Query: 266 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 445
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 446 LAFTLGVKQLIVGVNKMDSTE 508
LA +GVKQ++V +NK+D E
Sbjct: 163 LARQVGVKQIVVYINKVDMVE 183
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 218
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 219 LKAERELGITI 251
E+ GITI
Sbjct: 94 APEEKARGITI 104
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 287 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 466
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 467 KQLIVGVNKMD 499
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 27 PKMGKEKTHINIVVIGHVDSGKST 98
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 128
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 379
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 128
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 379
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.016
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 439
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 33.9 bits (74), Expect = 0.022
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 237 LGITI 251
GITI
Sbjct: 111 KGITI 115
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.029
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.5 bits (68), Expect = 0.12
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 237 LGITID 254
GITI+
Sbjct: 77 RGITIN 82
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 290 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 469
+ +ID PGH DF + + D AV I+ + AG+ QT+ A G+
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQTKVVWKQATKRGIP 147
Query: 470 QLIVGVNKMD 499
++I VNKMD
Sbjct: 148 KVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 260 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 26.2 bits (55), Expect = 4.3
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 237 LGITI 251
GIT+
Sbjct: 104 RGITV 108
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.27
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 29.9 bits (64), Expect = 0.35
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -1
Query: 273 SNFQRANRL*YRAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWW 94
SN +R NR + V +PK I I++ F P S S C+Y S D W
Sbjct: 13 SNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72
Query: 93 T 91
T
Sbjct: 73 T 73
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 296 IIDAPGHRDFIKNMITGTSQADCAVLIV 379
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 0.46
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -3
Query: 499 IHFVYSYDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAI--SLRGSCDHVLD 326
+H YS+ +L D + E+E + V +DT +EF D I + + D +
Sbjct: 104 LHLRYSFSQLQDFDEENEA---VHMIVPKDT-YEFEVPYHADIPKLIWQTSKDPFDREVM 159
Query: 325 EISVSRSINDGNIVLASFELPESKSIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNF 152
+ + IN + A + +SK++VI S + +QAY PLP+ A F +
Sbjct: 160 KYTRFWRINHPSYSHAVLDDEQSKALVISSFGDSSVSKISQAYAMMPLPVLKADFFRY 217
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 28.7 bits (61), Expect = 0.81
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 307 SINDGNIVLASFELPESKSIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 128
S++ + L S+ P S S + + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 337 HVLDEISVSRSINDGNIVLASFELPESKSIVIPSSRSAFS 218
+ +D+ SV R +N + + ELPE +++ + R AFS
Sbjct: 607 YTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFS 646
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 334 VLDEISVSRSINDGNIVLASFELPESKSIVIPSSRSAFSLSN 209
V D + SIN N++ A + +P +PSS +F L N
Sbjct: 87 VYDTLQELMSINSINMLYAFYYMPSGDEEKLPSSWKSFLLEN 128
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -3
Query: 373 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESKSIVIPSSRSAFSLSNTQAYL 194
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 193 KDPLPI 176
K LPI
Sbjct: 62 KALLPI 67
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 299 IDAPGHRDFIKNMITGTSQADCAVLIV 379
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 280 ASFELPESKSIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSI 131
A+ +LP S S P+S S + L DP +S A + + V +SI
Sbjct: 110 ATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSI 159
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.8 bits (54), Expect = 5.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 213 DKLKAERELGITIDLLSGSSKLASTMLPS 299
D +KA RELG+ ++ G L ++ +PS
Sbjct: 66 DMIKAARELGLNAYVIPGEKLLDASEIPS 94
>SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 585 SCCSLSCPFSGWHGDNML 638
+CCS SCP W+ + L
Sbjct: 169 ACCSTSCPSYWWNSEEYL 186
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 7.6
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 359 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRK 538
D L V+ G +NGQ EH+L LGV +I + DS E + + K
Sbjct: 581 DGGTLYVSTNNGYVLMFNFQNGQVIEHSLRRNQLGVAPII--LKHFDSKEKNAIFALGEK 638
Query: 539 SRRKYPHTSRRLATTQL 589
+ Y + S +L T L
Sbjct: 639 PQLMY-YESDKLVITPL 654
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 10.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 174 PGPPSRTSRWYVCQYHHIC 118
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,804,007
Number of Sequences: 5004
Number of extensions: 57429
Number of successful extensions: 233
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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