Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060624.seq
(675 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 156 1e-38
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 156 1e-38
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 156 1e-38
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 156 1e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 2e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 93 2e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 3e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.005
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.005
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.006
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.008
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 35 0.057
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.13
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.13
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 33 0.17
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.23
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.23
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.23
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.53
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.53
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.70
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.2
At3g02400.1 68416.m00227 forkhead-associated domain-containing p... 30 1.6
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.6
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.0
At3g08870.1 68416.m01031 lectin protein kinase, putative similar... 27 8.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 156 bits (379), Expect = 1e-38
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLAFTLGVKQ+I NKMD+T + ++ +++ FVPI
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 617 MARRQHVGASTKMPWFKG 670
+ ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 140 bits (338), Expect = 1e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 156 bits (379), Expect = 1e-38
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLAFTLGVKQ+I NKMD+T + ++ +++ FVPI
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 617 MARRQHVGASTKMPWFKG 670
+ ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 140 bits (338), Expect = 1e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 156 bits (379), Expect = 1e-38
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLAFTLGVKQ+I NKMD+T + ++ +++ FVPI
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 617 MARRQHVGASTKMPWFKG 670
+ ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 140 bits (338), Expect = 1e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 156 bits (379), Expect = 1e-38
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +2
Query: 257 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 437 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFW 616
HALLAFTLGVKQ+I NKMD+T + ++ +++ FVPI
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 617 MARRQHVGASTKMPWFKG 670
+ ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 140 bits (338), Expect = 1e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERELGITIDL 257
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 448
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 449 AFTLGVKQLIVGVNKMD 499
A TLGV +LIV VNKMD
Sbjct: 234 AKTLGVSKLIVVVNKMD 250
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/72 (41%), Positives = 51/72 (70%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 221
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 222 KAERELGITIDL 257
+ ER G T+++
Sbjct: 158 EEERLKGKTVEV 169
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHAL 445
F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA
Sbjct: 312 FNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHAR 371
Query: 446 LAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTSRRLATTQLLFAFVPIFWMAR 625
+ GV+Q+IV +NKMD + DL K S R + L ++P+ M
Sbjct: 372 VLRGFGVEQVIVAINKMDIVGYSKERFDLIKQHVGSFLQSCRFKDSSL--TWIPLSAMEN 429
Query: 626 RQHVGASTK---MPWFKG 670
+ V A + W++G
Sbjct: 430 QNLVAAPSDNRLSSWYQG 447
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +3
Query: 48 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 227
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 228 ERELGITI 251
ERE GIT+
Sbjct: 298 ERERGITM 305
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +2
Query: 266 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 445
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 446 LAFTLGVKQLIVGVNKMDSTE 508
LA +GV ++V +NK D +
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 30 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 164
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +2
Query: 266 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 445
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 446 LAFTLGVKQLIVGVNKMD 499
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTT 104
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 454
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 455 TLGVKQLIVGVNKMD 499
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 454
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 455 TLGVKQLIVGVNKMD 499
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 269 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 436
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 437 HALLAFTLGVKQLIVGVNKMD 499
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 287 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 466
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 467 KQLIVGVNKMD 499
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.7 bits (76), Expect = 0.057
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +2
Query: 272 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 451
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 452 FTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRK 550
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKIDQP---TADPERVKAQLK 212
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +3
Query: 21 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-----RTIEKFEKEAQEMGK 185
D K EK N +I H+D GKST L+ G I K + ++K ++E K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQRERGITVK 115
Query: 186 GSFKYAWVLDKLKAERELGITIDLL 260
+ +K++ + G ++L+
Sbjct: 116 AQTATMFYENKVEDQEASGYLLNLI 140
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 275 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 33.1 bits (72), Expect = 0.17
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 237 LGITIDLLSGSSKLASTMLP-SLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 413
GITI L + + P L L+DT S E R +A C L V S+ V
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 190
Query: 414 LRTV 425
+T+
Sbjct: 191 AQTL 194
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 269 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 290 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGG 131
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 394
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCG 128
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 439
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 237 LGITI 251
GITI
Sbjct: 117 KGITI 121
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 284 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 439
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 237 LGITI 251
GITI
Sbjct: 117 KGITI 121
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 299 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 475
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 476 IVGVNKMDSTEHHTV 520
+ +DS E V
Sbjct: 286 NLSTFTLDSDEEDEV 300
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 296 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 475
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 476 IVGVNKMD 499
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 290 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 469
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 470 QLIVGVNKMD 499
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At3g02400.1 68416.m00227 forkhead-associated domain-containing
protein / FHA domain-containing protein / AT hook
motif-containing protein contains Pfam profiles PF00498:
FHA domain, PF02178: AT hook motif
Length = 585
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 673 PSLEPRHFG*SSNMLSPCHPENGHESEQQLGCSQSS 566
PS E R+ +L CH E E+E Q GCS S
Sbjct: 340 PSKETRNDDAGEEVLKNCHVEEDKENEAQEGCSGRS 375
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 296 IIDAPGHRDFIKNMITGTSQADCAVLIV 379
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 296 IIDAPGHRDFIKNMITGTSQADCAVLIV 379
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 278 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 379
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCG 128
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 299 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 478
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 479 VGVNKMD 499
+ +NK+D
Sbjct: 609 IAINKID 615
>At3g08870.1 68416.m01031 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 693
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = -3
Query: 418 LRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESKSIVIP 239
+R+ E G + ++L+G C H + + + I +G++ ++ P IV+P
Sbjct: 406 VREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLLYQTPRRNGIVLP 465
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,946,932
Number of Sequences: 28952
Number of extensions: 310936
Number of successful extensions: 1076
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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