Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060623.seq
(682 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.5
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 2.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 2.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 620 QKHSNLQNYCLSVTALSLKNLTKIFL*SNKVGKYYLD 510
Q H N L +LKN + L ++++G+ YLD
Sbjct: 1014 QIHPKTLNEVLQADMNALKNFNQPLLVNDQLGQLYLD 1050
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 388 LADYKATLPILKSYPKVTVEVKWEL-QSEHGDLVCV 492
+ D+ TLP+ + P++ + +W++ E G L+ V
Sbjct: 497 MIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGV 532
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 388 LADYKATLPILKSYPKVTVEVKWEL-QSEHGDLVCV 492
+ D+ TLP+ + P++ + +W++ E G L+ V
Sbjct: 412 MIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGV 447
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 388 LADYKATLPILKSYPKVTVEVKWEL-QSEHGDLVCV 492
+ D+ TLP+ + P++ + +W++ E G L+ V
Sbjct: 731 MIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGV 766
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 249 SLTTAQHRSHKYRSSR 296
SLTT Q + HK R +R
Sbjct: 229 SLTTHQQKRHKLRVTR 244
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 519 LFRPFSVYKNAN*VAMFTLELPLYF 445
++RP S +KNA V T+ +P ++
Sbjct: 118 MWRPDSFFKNAKSVTFQTMTIPNHY 142
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 145 RVQTSDSPQRDGERMRRVVQSLYTEEKHRRHDRPAV*PLHNID 273
R + +S + DGER +S ++K RR+D+ LHN++
Sbjct: 238 RHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQ-----LHNVE 275
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 181 ERMRRVVQSLYTEEKHRRHDR 243
ER+RR + + +E+ R H+R
Sbjct: 34 ERLRRRREWMIQQEREREHER 54
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,608
Number of Sequences: 438
Number of extensions: 3860
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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