Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060622.seq
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 61 2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 51 8e-07
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 51 1e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 50 1e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 47 1e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 38 0.006
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 36 0.040
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 33 0.28
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 32 0.38
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.66
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 31 1.1
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.0
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 29 2.7
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 29 2.7
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 29 3.5
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 29 3.5
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 29 4.6
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 29 4.6
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_19645| Best HMM Match : Smr (HMM E-Value=8.2) 28 8.1
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 8.1
SB_58343| Best HMM Match : ELM2 (HMM E-Value=1.4e-16) 28 8.1
SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/136 (30%), Positives = 62/136 (45%)
Frame = +1
Query: 250 PSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 429
P + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 430 YVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYFKRVPAKRWPTSCQPLCT*TTNRLFR 609
+ ++ + Y +PT IQ Q PIA+ R + K K L +
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 610 RGDGPIALVLAPNQRV 657
GDGPI L+ AP + +
Sbjct: 587 VGDGPIVLICAPTREL 602
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.9 bits (141), Expect(2) = 2e-11
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 322 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 489
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 25.8 bits (54), Expect(2) = 2e-11
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 601 LFRRGDGPIALVLAPNQRVS 660
L + GDGPI LVL P + ++
Sbjct: 126 LLQPGDGPIVLVLCPTRELA 145
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQ 438
+V QPF K+FY P + K +P E +E+R + E + V G P++ + + +
Sbjct: 58 TVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 117
Query: 439 QGVKTMGYKEPTPIQAQGWPIAMLER 516
+K Y++PTPIQAQ P+ M R
Sbjct: 118 DVLKKNSYEKPTPIQAQAIPVIMSGR 143
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 295 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 474
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 475 PIQAQGWPIAMLER 516
PIQ Q P+ + R
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 280 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 459
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 460 YKEPTPIQAQGWPIAMLERI*LAYFKRVPAKRWPTSCQPLC-T*TTNRLFRRGDGPIALV 636
++ PTPIQ Q M R + + K S PLC T GD P+AL+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLCMLLRTKAPSNPGDTPVALI 150
Query: 637 LAPNQRV 657
L P + +
Sbjct: 151 LTPTREL 157
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = +1
Query: 346 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*L 525
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + R +
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 526 AYFKRVPAKRWPTSCQPLCT*TTN--RLFRRGD---GPIALVLAPNQRVS 660
+ K PL ++ R D GP AL+LAP + ++
Sbjct: 143 GVAETGSGKT-AAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELA 191
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 513 KNLVGVLQTGSGKTLAYILPAIVHINNQPPI 605
++++GV +TGSGKT A+ +P +V I P I
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKI 169
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +1
Query: 334 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 361 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYFK- 537
EV VSG I FEEAN + V+ YK+PTP+Q PI + R +A +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 538 ---RVPAKRWPTSCQPLCT*TTNRLFRRGDGPIALVLAPNQRVS 660
+ A P + T+ F P A+ +AP + ++
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELA 801
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +1
Query: 361 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
EV VSG I FEEAN + V+ YK+PTP+Q PI + R
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLQTGSGKTLAYILPAI 578
KD G +A G++L+G +TGSGKTLA+++P +
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/97 (26%), Positives = 39/97 (40%)
Frame = +1
Query: 370 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYFKRVPA 549
VSG I F E F + + + GY+ PTP+Q PI M R +A +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 550 KRWPTSCQPLCT*TTNRLFRRGDGPIALVLAPNQRVS 660
K L + L P+AL +AP + ++
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELA 565
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 456 GLQRTDAYSSSRLADSYVGKNLVGVLQTGSGKTLAYILPAIVHINNQ 596
G +R + L G++L+ QTGSGKT AY+LP + + Q
Sbjct: 498 GYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQ 544
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 510 GKNLVGVLQTGSGKTLAYILPAIVHINNQPPISER*WSDCFGLGA 644
G++++G +TGSGKTLA+++P I + Q W+ GLGA
Sbjct: 87 GRDVLGAAKTGSGKTLAFLIPIIETLWRQK------WTSMDGLGA 125
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 513 KNLVGVLQTGSGKTLAYILPAIVHI 587
++++G +TGSGKTLA+ +P I HI
Sbjct: 169 RDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLQTGSGKTLAYILPAI 578
+D G+ +S Y G++++G +TG+GKTL++ LP +
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLV 132
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 438 TRCKDNGLQRTDAYSSSRLADSYVGKNLVGVLQTGSGKTLAYILPAIVHINNQP 599
++C G+++ + + G++ +G +TGSGKT A+ LP + + + P
Sbjct: 20 SQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP 73
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 510 GKNLVGVLQTGSGKTLAYILPAIVHINNQPPISE 611
G+++ GV GSGK LAY+LP I I E
Sbjct: 224 GRDVAGVAIEGSGKRLAYLLPIIHQITESSVYQE 257
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 382 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 495
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 397 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
I FE+ + + + V GYK+PTP+Q PI +R
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKR 913
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 513 KNLVGVLQTGSGKTLAYILPAIVHINNQPP 602
++L+ QTGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 513 KNLVGVLQTGSGKTLAYILPAIVHINNQP 599
K+++G+ +TGSGKT A+ LP + + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 510 GKNLVGVLQTGSGKTLAYILP 572
GK++V + +TGSGKT A+++P
Sbjct: 318 GKDVVAMARTGSGKTAAFLIP 338
>SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/27 (51%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3
Query: 501 SYVGKNLVGVLQTGSGKTLAY-ILPAI 578
SY G++ +GVL TG GK++ + ILPA+
Sbjct: 192 SYTGRDGIGVLPTGYGKSVIFHILPAM 218
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 292 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 432
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 516 NLVGVLQTGSGKTLAYILPAIVH 584
+++ QTGSGKTLAY+ P +VH
Sbjct: 417 HVICAAQTGSGKTLAYLAP-LVH 438
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 510 GKNLVGVLQTGSGKTLAYILPAIVHINNQP 599
G + + VL TG+GK+L Y LPA ++ P
Sbjct: 539 GMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 483 SSRLADSYVGKNLVGVLQTGSGKTLAYILPAIVHINNQP 599
+S + + +GK++ TG+GKT A++LP + + +P
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 358 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLE 513
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ + +
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLAD 140
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYFKRVPAKRWPTSCQPLC- 582
FE+ + G+ G+ +P+PIQ + P+A+ R LA K K PL
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKT-AAYLVPLLE 107
Query: 583 -T*TTNRLFRRGDGPIALVLAPNQRVSTTNSASC 681
T TT + ALVL P + ++ S C
Sbjct: 108 RTDTTKNCIQ------ALVLVPTRELALQTSQIC 135
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYFKRVPAKRWPTSCQPLC- 582
FE+ + G+ G+ +P+PIQ + P+A+ R LA K K PL
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKT-AAYLVPLLE 107
Query: 583 -T*TTNRLFRRGDGPIALVLAPNQRVSTTNSASC 681
T TT + ALVL P + ++ S C
Sbjct: 108 RTDTTKNCIQ------ALVLVPTRELALQTSQIC 135
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 242 CSDLQRILFSHQILQILQIYCHRC-QIETN 156
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_19645| Best HMM Match : Smr (HMM E-Value=8.2)
Length = 346
Score = 27.9 bits (59), Expect = 8.1
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Frame = +1
Query: 235 SEHASPSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQ---- 402
SE AS S SLQ N N DP L R+ + R +VT ++ P Q
Sbjct: 239 SEGASLMKLSTSLQSLNTNIKDPRAAFLNRTKIKDLLVRTITKVTFLQQQIAQPRQLTLT 298
Query: 403 -YFEEANFPDYV----QQG--VKTMGYKEPTPIQAQG 492
YF E + DYV Q G + G P+P + G
Sbjct: 299 KYF-ETDSSDYVVELLQDGSAANSKGSDTPSPASSGG 334
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 173 CQIETNYRRICCLLQIWN-HRFHGYYSS 93
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
>SB_58343| Best HMM Match : ELM2 (HMM E-Value=1.4e-16)
Length = 460
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 326 DLLRTVGCGS*KFLLKGWSETESQLGD-ACSDLQRILFSHQILQILQIYCHRCQIETNYR 150
DL T+G + K LL+ + E ++GD D+ R SH+ + + + Y + I N
Sbjct: 41 DLSSTLGIQAEKHLLQAEEDAEVEMGDIELEDVSRHQLSHREVFLSRQYEN---INANTI 97
Query: 149 RICCLLQIWN 120
R CL+ ++N
Sbjct: 98 RGKCLVTLYN 107
>SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 326 DLLRTVGCGS*KFLLKGWSETESQLGD-ACSDLQRILFSHQILQILQIYCHRCQIETNYR 150
DL T+G + K LL+ + E ++GD D+ R SH+ + + + Y + I N
Sbjct: 52 DLSSTLGIQAEKHLLQAEEDAEVEMGDIELEDVSRHQLSHREVFLSRQYEN---INANTI 108
Query: 149 RICCLLQIWN 120
R CL+ ++N
Sbjct: 109 RGKCLVTLYN 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,464,069
Number of Sequences: 59808
Number of extensions: 394362
Number of successful extensions: 1077
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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