Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060622.seq
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    35   0.003
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.96 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   2.9  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   5.1  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   6.8  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   6.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +3

Query: 510 GKNLVGVLQTGSGKTLAYILPAIVHI 587
           G++L+   QTGSGKT A++LP I H+
Sbjct: 211 GRDLMACAQTGSGKTAAFMLPMIHHL 236



 Score = 33.9 bits (74), Expect = 0.005
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 361 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI +
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIIL 209


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 114 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 233
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 657 NSLVRRQDQSNRTI 616
           NS+VRR D+SN TI
Sbjct: 543 NSIVRRSDESNLTI 556


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 17/70 (24%), Positives = 26/70 (37%)
 Frame = +1

Query: 235 SEHASPSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 414
           SE    S    +++P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 415 ANFPDYVQQG 444
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 659 LTLWLGAKTKAIGPSPLRNRRLV--VYVHNGWQDVGQRF 549
           LT+WLG K   +    LRN+ +   ++V   W D   R+
Sbjct: 55  LTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLRW 93


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 523 LAYFKRVPAKRWPTSCQ 573
           +A F  +PA RWP  C+
Sbjct: 169 VAIFVPLPADRWPRVCE 185


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 313 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 405
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,694
Number of Sequences: 2352
Number of extensions: 13445
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)