Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060619.seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    31   0.007
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    30   0.016
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    30   0.016
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.11 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    24   1.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.2  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +3

Query: 588 INEPTAAAIAYGSLTKXGYWENEIV 662
           INEPTAAAIAYG L K G  +N +V
Sbjct: 1   INEPTAAAIAYG-LDKKGAEQNILV 24


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 20/35 (57%), Positives = 21/35 (60%)
 Frame = +3

Query: 588 INEPTAAAIAYGSLTKXGYWENEIVLIF*TSGXRY 692
           INEPTAAAIAYG L K    E   VLIF   G  +
Sbjct: 1   INEPTAAAIAYG-LDKKAEKERN-VLIFDLGGGTF 33


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 20/35 (57%), Positives = 21/35 (60%)
 Frame = +3

Query: 588 INEPTAAAIAYGSLTKXGYWENEIVLIF*TSGXRY 692
           INEPTAAAIAYG L K    E   VLIF   G  +
Sbjct: 1   INEPTAAAIAYG-LDKKAERERN-VLIFDLGGGTF 33


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +1

Query: 181 DHSVLCCVHRHRASHRRCRQEPGGENPNNTIFDAKRLI--GRKFEDATVQADMKHWPFEV 354
           DH  +  +H +  SH   +QEP G   +N  F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 355 VS 360
           +S
Sbjct: 399 LS 400


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 465 RSLSRQNCAECSYHGPAYFN 524
           RS   Q C  C YH P   N
Sbjct: 29  RSTISQGCKACGYHSPLESN 48


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 133 LPAREGGDHRQRPGQQDH 186
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 543 TKDAGTISGLNVLRIINEPTAA 608
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 26  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 67


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R  +T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 465 RSLSRQNCAECSYHGPAYFNDSQRQATKDAGTISGLNVLRII 590
           R+ +  N A+   H PA     +   TK++G ++   V  ++
Sbjct: 336 RTFTLSNTAKFGVHAPASGGGKEGTYTKESGFLAYYEVCELL 377


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 370 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 486
           KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 471 LSRQNCAECSYHGPAYFNDSQ 533
           ++  N   C Y+  AYF D Q
Sbjct: 15  VAADNKVVCYYNSKAYFRDGQ 35


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 224 IGDAAKNQVARTPTTQYSMPNVSSDVSSKMLLCKPT*STGLS 349
           +GD  + Q  R   T    PN  +  S+       T STG++
Sbjct: 70  MGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVA 111


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -1

Query: 506 VITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCF-M 330
           +ITAF +VLP+ A  +++ F     L    K   +   Y +  + +  ++   +  C+ +
Sbjct: 87  LITAFLSVLPQLAWDITYRFYGGFLLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPL 146

Query: 329 SACTVASSNLRPMRRLA 279
           + C+  S   + M  LA
Sbjct: 147 TYCSWTSRRSKVMVYLA 163


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 132 TPTQEYVVPRSIPT 91
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 660 QFRSPSTXFLSKT 622
           QFR P+T F++ T
Sbjct: 319 QFRDPNTGFMTNT 331


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 660 QFRSPSTXFLSKT 622
           QFR P+T F++ T
Sbjct: 319 QFRDPNTGFMTNT 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,575
Number of Sequences: 336
Number of extensions: 3838
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)