Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060619.seq
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 3e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 132 6e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 117 2e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 2e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 82 6e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 49 6e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 33 0.039
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.84
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 7.8
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (337), Expect = 3e-34
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SS
Sbjct: 60 NPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISS 119
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVP 513
MVL KM+ETAEAYLG V +AV+TVP
Sbjct: 120 MVLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 107 bits (257), Expect = 1e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 79.4 bits (187), Expect = 5e-16
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGSLTKXGYWENEIVLIF*TSGXR 689
PAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYG L + E+ VLIF G
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG-LDRSNQGESN-VLIFDLGGGT 202
Query: 690 Y 692
+
Sbjct: 203 F 203
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 132 bits (318), Expect = 6e-32
Identities = 59/86 (68%), Positives = 72/86 (83%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SS
Sbjct: 60 NPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISS 119
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVP 513
MVL KM+E+AEA+LG V +AV+TVP
Sbjct: 120 MVLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 107 bits (257), Expect = 1e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 79.0 bits (186), Expect = 6e-16
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGSLTKXGYWENEIVLIF*TSGXR 689
PAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYG L + E VLIF G
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG-LDRSNQHETN-VLIFDLGGGT 202
Query: 690 Y 692
+
Sbjct: 203 F 203
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 117 bits (281), Expect = 2e-27
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGR++ED Q D+KHWPF+V+ G P I+V Y GE K F +E+S+
Sbjct: 64 NPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISA 123
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVP 513
MVLTKMKE +EA L K V+ AVITVP
Sbjct: 124 MVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 95.5 bits (227), Expect = 6e-21
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 75.4 bits (177), Expect = 7e-15
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGSLTKXGYWENEIVLIF*TSGXR 689
PAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYG K +N VLIF G
Sbjct: 149 PAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKN--VLIFDLGGGT 206
Query: 690 Y 692
+
Sbjct: 207 F 207
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (265), Expect = 2e-25
Identities = 49/86 (56%), Positives = 67/86 (77%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+ +P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVP 513
M+L+KMK+TAEAYLGK V +AV+TVP
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVP 178
Score = 95.9 bits (228), Expect = 5e-21
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 77.4 bits (182), Expect = 2e-15
Identities = 34/38 (89%), Positives = 38/38 (100%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 623
PAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYG
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYG 215
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 82.2 bits (194), Expect = 6e-17
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVP 513
+L+KM+ETA YLGK V+NAV+TVP
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVP 191
Score = 72.9 bits (171), Expect = 4e-14
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 623
PAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYG
Sbjct: 191 PAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYG 228
Score = 69.3 bits (162), Expect = 5e-13
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAR 256
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 257 TPTTQY 274
P +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +2
Query: 77 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 510 PAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGSLTKXGYWENE 656
PA+F D QR+A +A I+GLN LR++N+ AAA+ YG +TK E E
Sbjct: 149 PAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYG-ITKTDLPEPE 196
Score = 41.9 bits (94), Expect = 8e-05
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVS 432
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVP 513
+ TK+K AEA L +V + VI++P
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAR 256
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ R
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVR 81
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 495 CSYHGPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 617
C P YF D+QR+A + A +GL VL++I++P A +A
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILA 206
Score = 32.3 bits (70), Expect = 0.068
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGED------KTFF 417
N +N++ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K
Sbjct: 82 NADNSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILT 139
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 513
E S L ++ E+AE +LG V V++VP
Sbjct: 140 AHEASVRHLRRLTESAEDFLGTKVNGCVMSVP 171
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.1 bits (72), Expect = 0.039
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTPTT 268
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N R P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 269 QYSMPNV 289
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 84 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 179
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 170 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 12
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 200 AFTDTERLIGDAAKNQVARTPTTQYSMPNVSSDV 301
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 262 WGSRHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 113
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,019,634
Number of Sequences: 5004
Number of extensions: 66024
Number of successful extensions: 233
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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