Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060618.seq
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001394-1|AAN71149.1|  307|Drosophila melanogaster GH05569p pro...    31   1.4  
AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl oxidas...    31   1.4  
AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA...    31   1.4  
BT004832-1|AAO45188.1|  951|Drosophila melanogaster RH72421p pro...    29   5.7  
AE014296-335|AAF47551.2|  858|Drosophila melanogaster CG7991-PA ...    29   5.7  
AE014134-283|AAF51346.1|  951|Drosophila melanogaster CG17657-PA...    29   5.7  

>BT001394-1|AAN71149.1|  307|Drosophila melanogaster GH05569p
           protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
 Frame = +3

Query: 267 PDLFVECINLNEYSQLSNKTQAVIQ--------ANA----NRSDPDWRYTAVRIFSKTQH 410
           PDL V+ + + + + L ++   ++Q        AN      R DP WRY + R+   T  
Sbjct: 99  PDLVVDYLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAA 158

Query: 411 KINEGSI-FGPWK 446
            IN G+  F P+K
Sbjct: 159 AINAGNADFRPFK 171


>AJ295626-1|CAB99481.1|  511|Drosophila melanogaster lysyl
           oxidase-like 2 protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
 Frame = +3

Query: 267 PDLFVECINLNEYSQLSNKTQAVIQ--------ANA----NRSDPDWRYTAVRIFSKTQH 410
           PDL V+ + + + + L ++   ++Q        AN      R DP WRY + R+   T  
Sbjct: 303 PDLVVDYLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAA 362

Query: 411 KINEGSI-FGPWK 446
            IN G+  F P+K
Sbjct: 363 AINAGNADFRPFK 375


>AE013599-3277|AAF46763.1|  511|Drosophila melanogaster CG4402-PA
           protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
 Frame = +3

Query: 267 PDLFVECINLNEYSQLSNKTQAVIQ--------ANA----NRSDPDWRYTAVRIFSKTQH 410
           PDL V+ + + + + L ++   ++Q        AN      R DP WRY + R+   T  
Sbjct: 303 PDLVVDYLEIEQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAA 362

Query: 411 KINEGSI-FGPWK 446
            IN G+  F P+K
Sbjct: 363 AINAGNADFRPFK 375


>BT004832-1|AAO45188.1|  951|Drosophila melanogaster RH72421p
           protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 102 NMTRLYFRPPLPKDSVSDPPSFLTDFLLLTN 194
           N+ +   RPPLPK S++ P S L    L +N
Sbjct: 683 NIPKPELRPPLPKVSIAPPTSSLASLTLKSN 713


>AE014296-335|AAF47551.2|  858|Drosophila melanogaster CG7991-PA
           protein.
          Length = 858

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 304 THSFPTRLKLSSKRTQIVRIPTGGTLLSAY 393
           T   PT+L ++ KR ++ ++P+GG  L+ Y
Sbjct: 311 TEPVPTQLDVTKKRYRVKQLPSGGEPLNGY 340


>AE014134-283|AAF51346.1|  951|Drosophila melanogaster CG17657-PA
           protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 102 NMTRLYFRPPLPKDSVSDPPSFLTDFLLLTN 194
           N+ +   RPPLPK S++ P S L    L +N
Sbjct: 683 NIPKPELRPPLPKVSIAPPTSSLASLTLKSN 713


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,303,505
Number of Sequences: 53049
Number of extensions: 761467
Number of successful extensions: 1913
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)