Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060616.seq
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.65 
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    25   1.5  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    24   4.6  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   8.1  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
 Frame = +3

Query: 63   ERLSIPSHLIDLHCYIKTNITSQFGPLTCMR---------LTGEPGTYDDNTDYNIAVIY 215
            ERL+  S+ I +    + N T+QF    CM+         L G+   Y D TD   A +Y
Sbjct: 1172 ERLNRASNQIAIVTTHQANTTAQFLVFRCMKYFLNPNVTVLGGQTLAYIDETDRKTAYLY 1231

Query: 216  SEYDI 230
               D+
Sbjct: 1232 DPQDV 1236


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 140 RSKLTCNVGFDVAMEVYKMRWNGKPLHFL 54
           RS L CN+  D  +  + ++  G+PL FL
Sbjct: 8   RSSLKCNIMPDYKVYYFNVKALGEPLRFL 36


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
 Frame = +3

Query: 81  SHLIDLHCYIKTNI---TSQFGP----LTCMRLTGEPGTYDDNTDYNIAVIYSEYDIT 233
           +H IDL+  +K  +   +S+       L  +R+   PG      +Y+IA++  E +IT
Sbjct: 86  AHCIDLYSQVKPTVRVGSSEHAAGGTVLHLVRIVPHPGHSSSANNYDIALLELESEIT 143


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 171 GTYDDNTDYNIAVIYS 218
           G YDD    NIA++YS
Sbjct: 211 GLYDDEQGPNIALLYS 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,785
Number of Sequences: 2352
Number of extensions: 10718
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)