Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060616.seq
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p pro...    31   1.7  
AE014296-1543|AAF50352.1|  551|Drosophila melanogaster CG5735-PA...    31   1.7  
AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD...    31   1.7  
AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC...    31   1.7  
AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB...    31   1.7  

>AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p
           protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 92  RPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYCRXLQRVRHHH 235
           +PP LHQ QH +       H  +++ + L  QH  Q    L  + HHH
Sbjct: 173 KPPQLHQQQHQQQ---HQQHQQHQQQQQL-HQHQQQLSPNLSALHHHH 216


>AE014296-1543|AAF50352.1|  551|Drosophila melanogaster CG5735-PA,
           isoform A protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 92  RPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYCRXLQRVRHHH 235
           +PP LHQ QH +       H  +++ + L  QH  Q    L  + HHH
Sbjct: 20  KPPQLHQQQHQQQ---HQQHQQHQQQQQL-HQHQQQLSPNLSALHHHH 63


>AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD,
           isoform D protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 92  RPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYCRXLQRVRHHH 235
           +PP LHQ QH +       H  +++ + L  QH  Q    L  + HHH
Sbjct: 173 KPPQLHQQQHQQQ---HQQHQQHQQQQQL-HQHQQQLSPNLSALHHHH 216


>AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC,
           isoform C protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 92  RPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYCRXLQRVRHHH 235
           +PP LHQ QH +       H  +++ + L  QH  Q    L  + HHH
Sbjct: 173 KPPQLHQQQHQQQ---HQQHQQHQQQQQL-HQHQQQLSPNLSALHHHH 216


>AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB,
           isoform B protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 92  RPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYCRXLQRVRHHH 235
           +PP LHQ QH +       H  +++ + L  QH  Q    L  + HHH
Sbjct: 173 KPPQLHQQQHQQQ---HQQHQQHQQQQQL-HQHQQQLSPNLSALHHHH 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,769,800
Number of Sequences: 53049
Number of extensions: 463155
Number of successful extensions: 1015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)