Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060614.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    30   0.059
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.7  
AF203336-1|AAF19831.1|  187|Anopheles gambiae immune-responsive ...    23   9.0  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 30.3 bits (65), Expect = 0.059
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -1

Query: 363 MRVCVKYMVVYVMFSLLISCIFYALFKKNISIVHFFL 253
           M++ + + VV+++F + +S + +  FKK ISIV  FL
Sbjct: 534 MKLSIIFGVVHMIFGVCMSVVNHNFFKKRISIVLEFL 570


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/78 (21%), Positives = 37/78 (47%)
 Frame = -1

Query: 393 FDNKQKIHVYMRVCVKYMVVYVMFSLLISCIFYALFKKNISIVHFFLYSL*VWKISHYSV 214
           FDN   I + M V      +  +   L +C    +F  ++  +H FL+S  +  +   +V
Sbjct: 328 FDNIGTI-LLMAVIGTIFNIATIGGSLWACGQTGIFGVDLPFLHIFLFSSLIAAVDPVAV 386

Query: 213 RAIFVKRDTKFLLHVLIY 160
            A+F +     +L+++++
Sbjct: 387 LAVFEEIHVNEVLYIVVF 404


>AF203336-1|AAF19831.1|  187|Anopheles gambiae immune-responsive
           chymotrypsin-likeserine protease-related protein ISPR1
           protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 6/14 (42%), Positives = 14/14 (100%)
 Frame = -1

Query: 342 MVVYVMFSLLISCI 301
           MVV+++F++L++C+
Sbjct: 8   MVVHIIFAILLACV 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,565
Number of Sequences: 2352
Number of extensions: 12475
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)