Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060614.seq
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051914-1|AAH51914.1|  426|Homo sapiens NMUR1 protein protein.        31   3.8  
BC036543-1|AAH36543.1|  426|Homo sapiens neuromedin U receptor 1...    31   3.8  
AF272362-1|AAG24793.1|  426|Homo sapiens neuromedin U receptor 1...    31   3.8  
AF044601-1|AAC02680.1|  403|Homo sapiens orphan G protein-couple...    31   3.8  
AC017104-4|AAY24249.1|  426|Homo sapiens unknown protein.              31   3.8  

>BC051914-1|AAH51914.1|  426|Homo sapiens NMUR1 protein protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -1

Query: 426 LNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSL--LISCIFYALFKKNISIVHFFL 253
           LNLT    + K+   Q+  ++M +C  Y++++V+ ++   ++C+     K   +  +++L
Sbjct: 40  LNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYL 99

Query: 252 YSL 244
           +SL
Sbjct: 100 FSL 102


>BC036543-1|AAH36543.1|  426|Homo sapiens neuromedin U receptor 1
           protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -1

Query: 426 LNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSL--LISCIFYALFKKNISIVHFFL 253
           LNLT    + K+   Q+  ++M +C  Y++++V+ ++   ++C+     K   +  +++L
Sbjct: 40  LNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYL 99

Query: 252 YSL 244
           +SL
Sbjct: 100 FSL 102


>AF272362-1|AAG24793.1|  426|Homo sapiens neuromedin U receptor 1
           protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -1

Query: 426 LNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSL--LISCIFYALFKKNISIVHFFL 253
           LNLT    + K+   Q+  ++M +C  Y++++V+ ++   ++C+     K   +  +++L
Sbjct: 40  LNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYL 99

Query: 252 YSL 244
           +SL
Sbjct: 100 FSL 102


>AF044601-1|AAC02680.1|  403|Homo sapiens orphan G protein-coupled
           receptor protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -1

Query: 426 LNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSL--LISCIFYALFKKNISIVHFFL 253
           LNLT    + K+   Q+  ++M +C  Y++++V+ ++   ++C+     K   +  +++L
Sbjct: 17  LNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYL 76

Query: 252 YSL 244
           +SL
Sbjct: 77  FSL 79


>AC017104-4|AAY24249.1|  426|Homo sapiens unknown protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -1

Query: 426 LNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSL--LISCIFYALFKKNISIVHFFL 253
           LNLT    + K+   Q+  ++M +C  Y++++V+ ++   ++C+     K   +  +++L
Sbjct: 40  LNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYL 99

Query: 252 YSL 244
           +SL
Sbjct: 100 FSL 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,911,350
Number of Sequences: 237096
Number of extensions: 1565200
Number of successful extensions: 2381
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2379
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)