Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060614.seq
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p pro...    31   1.9  
AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-P...    31   1.9  
AE014298-2220|AAO41659.1| 1812|Drosophila melanogaster CG33173-P...    30   2.6  
AE014297-368|AAF51945.1|  227|Drosophila melanogaster CG2023-PA ...    29   4.5  
AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-P...    29   7.8  

>AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p
           protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -1

Query: 351 VKYMVVYVMFSLLISCIFYALFKKNISIVHFFLYS-L*VWKISHYSVRAIFVKRDTKFLL 175
           ++ MV   +FSLLI+C+   L   +I+++  F ++ +  W   + SV  IF+   T  L+
Sbjct: 144 LRLMVFCALFSLLITCLMLFLDISHIALMFPFNWTKVNTW--MYLSVGLIFILSST-LLV 200

Query: 174 HVLIY 160
           H+++Y
Sbjct: 201 HMVLY 205


>AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-PA
           protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -1

Query: 351 VKYMVVYVMFSLLISCIFYALFKKNISIVHFFLYS-L*VWKISHYSVRAIFVKRDTKFLL 175
           ++ MV   +FSLLI+C+   L   +I+++  F ++ +  W   + SV  IF+   T  L+
Sbjct: 144 LRLMVFCALFSLLITCLMLFLDISHIALMFPFNWTKVNTW--MYLSVGLIFILSST-LLV 200

Query: 174 HVLIY 160
           H+++Y
Sbjct: 201 HMVLY 205


>AE014298-2220|AAO41659.1| 1812|Drosophila melanogaster CG33173-PA
            protein.
          Length = 1812

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -1

Query: 342  MVVYVMFSLLISCIFYALFKKNISIVHFFLYSL*VWKISHYSVRAIFVKRDTKFLLHVLI 163
            +V ++++ LL+  +  ALF  NI+++ F    L    I  YSV  +F+     F L++LI
Sbjct: 1007 IVAFLIYELLV--VLLALFPINIAVIFFHWDLLMDSNIHIYSVYVMFIIAACVFSLNILI 1064


>AE014297-368|AAF51945.1|  227|Drosophila melanogaster CG2023-PA
           protein.
          Length = 227

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 360 RVCVKYMVVYVMFSLLISCIFYALFKK 280
           R C   M+++  FSL ++C+FY + K+
Sbjct: 199 RECTDKMLLFFAFSLFLACVFYIVQKR 225


>AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-PA
           protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 20/83 (24%), Positives = 41/83 (49%)
 Frame = -1

Query: 438 LFSILNLTTHFKQ*KFDNKQKIHVYMRVCVKYMVVYVMFSLLISCIFYALFKKNISIVHF 259
           +F  LNL     +   D   K ++ ++    ++++++    ++SC +  L+ K   I+  
Sbjct: 54  IFLFLNLYFMVPRIMEDGYMKYNIVLQWNF-FVMLFLRAIAVVSC-YGTLWLKRHKIIQL 111

Query: 258 FLYSL*VWKISHYSVRAIFVKRD 190
           + YSL  WK   +  RAI  K++
Sbjct: 112 YKYSLIYWKRFGHITRAIVDKKE 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,816,809
Number of Sequences: 53049
Number of extensions: 486364
Number of successful extensions: 853
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)