Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060613.seq
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E4A682 Cluster: PREDICTED: hypothetical protein;... 65 2e-09
UniRef50_Q5BYM9 Cluster: SJCHGC09192 protein; n=2; Schistosoma j... 53 7e-06
UniRef50_Q16NR0 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q8IZP2 Cluster: Protein FAM10A4; n=13; Theria|Rep: Prot... 52 1e-05
UniRef50_P50502 Cluster: Hsc70-interacting protein; n=47; Eumeta... 52 1e-05
UniRef50_UPI0000519E87 Cluster: PREDICTED: similar to CG2947-PA,... 52 1e-05
UniRef50_Q6DIN1 Cluster: Suppression of tumorigenicity 13; n=6; ... 51 2e-05
UniRef50_Q8VWG7 Cluster: Tetratricoredoxin; n=7; core eudicotyle... 50 5e-05
UniRef50_Q93YR3 Cluster: FAM10 family protein At4g22670; n=8; Sp... 50 5e-05
UniRef50_Q8IRT4 Cluster: CG32789-PA; n=20; Diptera|Rep: CG32789-... 50 7e-05
UniRef50_Q0PW50 Cluster: Hsp70 interacting protein; n=1; Toxopla... 49 1e-04
UniRef50_A5BAU0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_UPI000049848C Cluster: hsc70-interacting protein; n=1; ... 40 0.043
UniRef50_Q08168 Cluster: 58 kDa phosphoprotein; n=11; Plasmodium... 40 0.043
UniRef50_Q54RH6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q00ZA7 Cluster: FOG: TPR repeat; n=2; Ostreococcus|Rep:... 33 8.6
UniRef50_Q2FR40 Cluster: Regulatory protein, Crp; n=1; Methanosp... 33 8.6
>UniRef50_UPI0000E4A682 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 526
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI PD TDE Q MGD +KEVT+ DE++ KRSEAM A SE +EA + T AI+++P
Sbjct: 63 GVIEPD-TDEPQPMGDTSKEVTDEMQDEANSKRSEAMAAVSEGNIEEAIKIFTEAIEINP 121
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI PD TDE Q MGD +KEVT+ DE++ KRSEAM A SE +EA + T AI+++P
Sbjct: 144 GVIEPD-TDEPQPMGDTSKEVTDEMQDEANSKRSEAMAAVSEGNIEEAIKIFTEAIEINP 202
Score = 36.7 bits (81), Expect = 0.53
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 499 IRSXXALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
I AL AKR +++LNKPNA + DC L+ DS + +RG + LG
Sbjct: 200 INPHSALLHAKRASCFVRLNKPNAAIRDCDKGIDLNPDS-AQVYKWRGKAHRLLG 253
>UniRef50_Q5BYM9 Cluster: SJCHGC09192 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC09192 protein - Schistosoma
japonicum (Blood fluke)
Length = 242
Score = 52.8 bits (121), Expect = 7e-06
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +3
Query: 84 QQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLP 203
+Q+ LK FVE+ KT+P++L P+L FFK++L+SLG ++P
Sbjct: 9 EQISMLKQFVELLKTKPEILDTPELLFFKEWLVSLGANIP 48
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 335 IAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDPXV 514
+ P + +MGD EVT+ +++D K+SEAM SE EA L T AI+L+P
Sbjct: 82 VLPKEDVLDLEMGDKTIEVTDEMIEKADEKKSEAMEKMSEGAFGEAINLFTEAIKLNPQD 141
Query: 515 LCXLXNGARC 544
A C
Sbjct: 142 ALLYARRASC 151
>UniRef50_Q16NR0 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 394
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
G + PD E Q MGD +KE +E D+++ RS+A A+SEQ +EA L T AI+L+P
Sbjct: 88 GCVEPDNEPE-QPMGDASKEPSEDDIDKANELRSKAAAAYSEQNYEEAVKLFTEAIELNP 146
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
AL KRGQ YLKL+KPNAC+ DC A ++ DS TA FRG + LG
Sbjct: 149 ALYHGKRGQAYLKLSKPNACIRDCTRALEINPDSATAY-KFRGRANRLLG 197
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 87 QLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTATFGAKDFTAAGDXKSAMKK 266
+L +L FV++C QPQLL+ PQL FFK ++ LG ++P G DF A KK
Sbjct: 9 ELKKLNIFVDLCAAQPQLLNLPQLAFFKSFVEKLGGTVPE---GQPDFGGAQPKTEEPKK 65
Query: 267 K 269
+
Sbjct: 66 E 66
>UniRef50_Q8IZP2 Cluster: Protein FAM10A4; n=13; Theria|Rep: Protein
FAM10A4 - Homo sapiens (Human)
Length = 240
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI PD TD Q+MGD N E+TE D+++ K+ A+ A ++ + +A L T AI+L+P
Sbjct: 83 GVIEPD-TDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNP 141
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDS 615
A+ +AKR V++KL KPNA + DC A ++ DS
Sbjct: 144 AILYAKRASVFVKLQKPNAAIRDCDRAIEINPDS 177
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +3
Query: 84 QQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTATFGAK 224
+++++L++FV++CK P +LH ++ F ++++ S+G TAT AK
Sbjct: 4 RKVNELRAFVKMCKKDPSILHTQEMRFLREWVESMG---GTATQKAK 47
>UniRef50_P50502 Cluster: Hsc70-interacting protein; n=47;
Eumetazoa|Rep: Hsc70-interacting protein - Homo sapiens
(Human)
Length = 369
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI PD TD Q+MGD N E+TE D+++ K+ A+ A ++ + +A L T AI+L+P
Sbjct: 87 GVIEPD-TDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNP 145
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +3
Query: 84 QQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTATFGAKDFTAAGDXKSAMK 263
+++++L++FV++CK P +LH ++ F ++++ S+G +P AT AK + K K
Sbjct: 4 RKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPPATQKAKSEENTKEEKPDSK 63
Query: 264 K 266
K
Sbjct: 64 K 64
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
A+ +AKR V++KL KPNA + DC A ++ DS +RG + LG
Sbjct: 148 AILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPY-KWRGKAHRLLG 196
>UniRef50_UPI0000519E87 Cluster: PREDICTED: similar to CG2947-PA,
isoform A isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to CG2947-PA, isoform A isoform 1 - Apis
mellifera
Length = 378
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
AL +AKRGQ++L LNKPNAC+ DC A L+ DS A FRG + LG
Sbjct: 152 ALLYAKRGQIFLILNKPNACIRDCDRALELNPDS-AAAHKFRGRANYLLG 200
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = +2
Query: 332 VIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
VI PD TD Q MG+ + TE ES KRSEA+ AF E+ ++A L T AI L+P
Sbjct: 92 VIEPD-TDAPQKMGNLTLQPTEEEIAESQAKRSEAVSAFIEKDYEKAIELYTEAIILNP 149
>UniRef50_Q6DIN1 Cluster: Suppression of tumorigenicity 13; n=6;
Bilateria|Rep: Suppression of tumorigenicity 13 -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 382
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI P DE Q+MGD + EVTE D+++ K+ EA+ A E + ++ L T AI+L+P
Sbjct: 85 GVI-PGDDDEPQEMGDEDVEVTEEMMDQANEKKVEAINALGEGELQKSIDLFTEAIKLNP 143
Query: 509 XV 514
+
Sbjct: 144 RI 145
Score = 50.0 bits (114), Expect = 5e-05
Identities = 18/42 (42%), Positives = 32/42 (76%)
Frame = +3
Query: 84 QQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTA 209
+++ +L+ FV +C++ P +LH +L FFKD+L+S+G S+P A
Sbjct: 4 RKVQELREFVRLCESNPNVLHCSELQFFKDWLLSMGASVPAA 45
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
A+ +AKR VY+KL KPNA + DC A ++ DS +RG + LG
Sbjct: 146 AILYAKRASVYIKLQKPNAAIRDCSRAIAINPDSAQPY-KWRGKAHRLLG 194
>UniRef50_Q8VWG7 Cluster: Tetratricoredoxin; n=7; core
eudicotyledons|Rep: Tetratricoredoxin - Arabidopsis
thaliana (Mouse-ear cress)
Length = 380
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 332 VIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
V+ PD + Q MGDP EVT+ D++ ++S+AM A S+ + DEA T A+ L+P
Sbjct: 86 VVEPDN-EPPQPMGDPTAEVTDENRDDAQSEKSKAMEAISDGRFDEAIEHLTKAVMLNP 143
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 87 QLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTATFGAKDFTAAGDXKSAMKK 266
Q+ +L+ FVE K P +LH P L FFK+YL SLG +P +D+ + K +
Sbjct: 6 QVAELRRFVEQLKLNPSILHDPSLVFFKEYLRSLGAQVPKIEKTERDYEDKAETKPSFSP 65
Query: 267 K 269
K
Sbjct: 66 K 66
>UniRef50_Q93YR3 Cluster: FAM10 family protein At4g22670; n=8;
Spermatophyta|Rep: FAM10 family protein At4g22670 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 441
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 87 QLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPT 206
+L +LK F++ CK+ P LL P L FF+DYL SLG +PT
Sbjct: 5 KLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPT 44
Score = 41.9 bits (94), Expect = 0.014
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 335 IAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
+ PD D Q MGD + EVT+ + + + +AM A SE DEA T AI L+P
Sbjct: 98 VEPDN-DPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNP 154
Score = 34.3 bits (75), Expect = 2.8
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 496 TIRSXXALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
T+ A+ + R VY+KL KPNA + D A ++ DS + RG + LG
Sbjct: 151 TLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKS-RGMARAMLG 205
>UniRef50_Q8IRT4 Cluster: CG32789-PA; n=20; Diptera|Rep: CG32789-PA
- Drosophila melanogaster (Fruit fly)
Length = 377
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 329 GVIAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDP 508
GVI D +D +Q MG+ +K+ TE +++ R++A A+ +QK DEA L T AI+L P
Sbjct: 99 GVIEAD-SDPAQPMGNYSKKATEEEVEQASELRAQAASAYGQQKFDEAIALYTKAIELSP 157
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
AL AKRGQ +LKL KPNAC+ DC A L+ D A FRG + LG
Sbjct: 160 ALFHAKRGQAFLKLKKPNACIRDCDVALELNSD-LAAGYKFRGRARRLLG 208
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 90 LDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLPTATF 215
L +LK F++ P L+ PQL F KD++ G ++P F
Sbjct: 10 LKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQF 51
>UniRef50_Q0PW50 Cluster: Hsp70 interacting protein; n=1; Toxoplasma
gondii|Rep: Hsp70 interacting protein - Toxoplasma
gondii
Length = 425
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +3
Query: 66 VARTTLQQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLP 203
+A + Q++ +LK+F+ +C+ P +LH P+L FFK+YL SL ++P
Sbjct: 1 MAALSPQKVAELKAFIGMCERDPSILHRPELSFFKEYLQSLKAAIP 46
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 499 IRSXXALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
I + AL + +R V LKL +P AC+ DC A L+ DS A RG + LG
Sbjct: 147 IGNPTALLYTRRADVLLKLKRPVACIRDCDEALKLNPDSARAY-KIRGKANKLLG 200
>UniRef50_A5BAU0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 85
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 87 QLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLP 203
++ +LK FV K+ P +L++P L FFK YL SLG +P
Sbjct: 42 KISELKQFVNSVKSDPSILYNPSLSFFKSYLQSLGARIP 80
>UniRef50_UPI000049848C Cluster: hsc70-interacting protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hsc70-interacting
protein - Entamoeba histolytica HM-1:IMSS
Length = 359
Score = 40.3 bits (90), Expect = 0.043
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 335 IAPDQTDESQDMGDPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDPXV 514
+ P T E + + + + EVTE ++ KRSEAM AF+ + D+A T AI+L+P V
Sbjct: 88 VIPGDTIEPETI-NMDIEVTEEMEVQASTKRSEAMEAFNNGEVDKAINTITEAIKLNPRV 146
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 78 TLQQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLGVSLP 203
T Q+ LK F+ + + P+ L+ +L F ++Y+ISLG +P
Sbjct: 7 TNSQIQALKVFINLLQQHPEFLNDDRLDFLRNYIISLGGKIP 48
>UniRef50_Q08168 Cluster: 58 kDa phosphoprotein; n=11;
Plasmodium|Rep: 58 kDa phosphoprotein - Plasmodium
berghei
Length = 423
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 81 LQQLDQLKSFVEICKTQPQLLHHPQLXFFKDYLISLG 191
+++++ LK FV C+ P +L P+L FFKD++ S G
Sbjct: 3 IEKIEDLKKFVASCEENPSILLKPELSFFKDFIESFG 39
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 514 ALXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTA 624
A+ + KR + L L +P AC+ DC A L+ DS A
Sbjct: 147 AMIYTKRASILLNLKRPKACIRDCTEALNLNVDSANA 183
>UniRef50_Q54RH6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 514
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 374 DPNKEVTEXXXDESDXKRSEAMRAFSEQKXDEAXTLXTAAIQLDPXVLCXLXNGARCISN 553
DP+ E +SD ++ A + FSEQK D A + T AI+ P + R SN
Sbjct: 39 DPSTLSKEECIKKSDEYKAIANKHFSEQKYDLAAEVYTKAIKYHPTAILY---SNRSFSN 95
Query: 554 *TNQMHV 574
N+++V
Sbjct: 96 FKNELYV 102
>UniRef50_Q00ZA7 Cluster: FOG: TPR repeat; n=2; Ostreococcus|Rep:
FOG: TPR repeat - Ostreococcus tauri
Length = 383
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 517 LXFAKRGQVYLKLNKPNACMTDCXHA*XLSCDSXTALTNFRGASXXGLG 663
L +AKR + L+ KP A + DC A + DS AL RGA+ LG
Sbjct: 128 LTYAKRAECSLRAKKPLAAIRDCDAALKANPDSAKAL-KIRGAAYRYLG 175
>UniRef50_Q2FR40 Cluster: Regulatory protein, Crp; n=1;
Methanospirillum hungatei JF-1|Rep: Regulatory protein,
Crp - Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 242
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 168 KDYLISLGVSLPTATFGAKDFTAAGDXKSAMKKKWNRHLTRNRSLN 305
KD LG++ PT T +D G + K K+ RH N SL+
Sbjct: 189 KDLADQLGIAGPTVTRAVQDLAHEGSIRLEKKGKFTRHYLSNESLS 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,398,311
Number of Sequences: 1657284
Number of extensions: 7454430
Number of successful extensions: 13092
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13090
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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