Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060612.seq
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 100 7e-20
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 97 3e-19
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 93 6e-18
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 92 1e-17
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 81 2e-14
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 81 3e-14
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 69 1e-10
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 69 1e-10
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 56 1e-06
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 52 2e-05
UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophy... 50 5e-05
UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata NPV-A|... 47 5e-04
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 46 6e-04
UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticars... 45 0.001
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 44 0.003
UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum granulovir... 42 0.011
UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura granulovi... 42 0.014
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 41 0.032
UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep: B... 40 0.056
UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum granuloviru... 39 0.098
UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococc... 38 0.17
UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovir... 38 0.23
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 38 0.30
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 37 0.40
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 37 0.52
UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.69
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 36 0.69
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.91
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 36 0.91
UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep: B... 35 1.6
UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep: B... 35 1.6
UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22; Gammaprote... 35 1.6
UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein; ... 35 1.6
UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein; ... 35 1.6
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 35 1.6
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 35 2.1
UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: ... 35 2.1
UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4; root... 35 2.1
UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1; Strep... 35 2.1
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 35 2.1
UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus ... 34 2.8
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 34 2.8
UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep: ... 34 2.8
UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8; Pa... 34 2.8
UniRef50_UPI0000498E7A Cluster: hypothetical protein 132.t00007;... 34 3.7
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 34 3.7
UniRef50_A6LSZ0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 33 4.9
UniRef50_Q01FF7 Cluster: Homology to unknown gene; n=2; Ostreoco... 33 4.9
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 33 4.9
UniRef50_Q0IL69 Cluster: Bro-b; n=1; Leucania separata nuclear p... 33 6.4
UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium ther... 33 6.4
UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep: ... 33 8.5
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 99.5 bits (237), Expect = 7e-20
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +3
Query: 180 TSCDS*C*QKIQNDVQRVGVYTIY---PAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMK 350
T CD + N + + TI P ++VVK+GDPLYLQPHTVLITK GVIQLIMK
Sbjct: 42 TVCDKAIRVHVDNKYKSLFEQTIQNGGPTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMK 101
Query: 351 SKLPYAVELQAWLLEEVIPQ 410
SKLPYA+ELQ WLLEEVIPQ
Sbjct: 102 SKLPYAIELQEWLLEEVIPQ 121
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
MA+VKIGEFKFGEDTF LRYVLE+ QV+FVAKD+A+SLKY C +A+ V+VD KYK+
Sbjct: 1 MARVKIGEFKFGEDTFNLRYVLERDQ-QVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSL 59
Query: 223 YSES 234
+ ++
Sbjct: 60 FEQT 63
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +3
Query: 255 APDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
A + + KQGDPLYL PHTVL+TKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ
Sbjct: 70 ASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 121
Score = 90.2 bits (214), Expect = 4e-17
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
M+QVKIG+FKFG+DTFTLRYVL G QVKFVAKDIAS+LK+ NC +AV +VD KYK+T
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLG-GEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKST 59
Query: 223 YSESGSI 243
+ E G I
Sbjct: 60 F-EHGEI 65
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +3
Query: 270 VKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
V +GD LYLQPHT+LITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ
Sbjct: 74 VNKGDSLYLQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 120
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = +1
Query: 52 VKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTY 225
VKIG FKFGEDTF LRYV+E+ VKFVAKD+AS+LK+ N K+AV +VD+KYK+TY
Sbjct: 5 VKIGNFKFGEDTFRLRYVVEREI--VKFVAKDVASNLKHQNTKKAVKDHVDEKYKSTY 60
Score = 38.3 bits (85), Expect = 0.17
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 410 VLCTGKYAPAVKMDTNYGVIEELNKKLAFASESWAEANEKI 532
VLCTGKYAPAV+MDT+ I+E +K L + AE +EKI
Sbjct: 121 VLCTGKYAPAVEMDTD---IQE-SKILNTYKQDIAEKDEKI 157
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3
Query: 270 VKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
+K+G+PLYLQPHT+LITK GVIQLIMKSKLPYAVELQ WLLEEVIPQ
Sbjct: 85 IKKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQ 131
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
MAQVKIG FKFGED F LRYV++ ++QV FV KDIA LKY +CKQA+ +V++KYK
Sbjct: 1 MAQVKIGVFKFGEDEFELRYVVDN-DMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCV 59
Query: 223 YSESG 237
+ + G
Sbjct: 60 FEKMG 64
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 264 NVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
+++K+G PL+L T+LITK GVIQLIMKSKLPYAVELQ WLLEEVIPQ
Sbjct: 88 DLIKKGHPLFLYDQTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQ 136
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/65 (60%), Positives = 42/65 (64%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
M QVKIG FKFGED F LRYV+ V FVAKDIAS LKY AV +VDKKYK
Sbjct: 1 MPQVKIGVFKFGEDKFKLRYVVGNDK-DVLFVAKDIASVLKYEKPANAVAKHVDKKYKCY 59
Query: 223 YSESG 237
+ E G
Sbjct: 60 FLEKG 64
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
MAQVKIG+FKFGEDTFTLRYVL++ VKFVAKDIASSL Y AV VD KYK+T
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVLDKD--IVKFVAKDIASSLGYEKFSNAVKKYVDIKYKST 58
Query: 223 YSE 231
Y +
Sbjct: 59 YGD 61
Score = 67.3 bits (157), Expect = 3e-10
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 264 NVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARAS 428
N VK+GD LYLQPHT+L++ GV+QLI +SK+P A E Q W + V+P C S
Sbjct: 66 NNVKRGDLLYLQPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHVLPACLRNRS 120
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/39 (84%), Positives = 33/39 (84%)
Frame = +3
Query: 294 LQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
L P TVLI K GVIQLIM SKLPYAVELQ WLLEEVIPQ
Sbjct: 105 LHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEEVIPQ 143
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1
Query: 40 KMAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKT 219
KM V + +FKFG+ T LRY ++Q N V FV +DIA LKY + A+ +V+ KYK
Sbjct: 27 KMCTVVVRDFKFGDITMRLRYTIDQDNC-VWFVGRDIAKLLKYQRTQDAIKKHVNVKYKA 85
Query: 220 TYSES 234
S
Sbjct: 86 LIKHS 90
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 261 DNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
+N++ + LY+ P T++I K GVIQLIMKSKL YAVELQ W+ EEVIPQ
Sbjct: 80 NNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQEWMFEEVIPQ 129
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +1
Query: 43 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 222
MA VKI FKFG++ LRYV+ N +V FV KDIA+ LKY N K+A+I +VD KYK
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGD-NDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIA 59
Query: 223 YSE 231
+ +
Sbjct: 60 FGD 62
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
PL QP+T+ IT+ G+ LIM+SKLP A E Q+WL EEV+P+
Sbjct: 77 PLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPE 118
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
P QP+TV IT+ GV LI+KSKLP A + Q WL EEV+P+
Sbjct: 60 PANWQPNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPE 101
>UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophyes
honmai NPV|Rep: Baculovirus repeated ORF - Adoxophyes
honmai nucleopolyhedrovirus
Length = 113
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +1
Query: 136 VAKDIASSLKYVNCKQAVIVNVDKKYKTTYSESGSIPYTP 255
+AKD+A++LKYV+CKQA+ +NVD+KYK ++ G +TP
Sbjct: 1 MAKDVAAALKYVDCKQAIRINVDEKYKCKFNR-GCTTHTP 39
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 234 GVYTIYPAPDNVVKQGDPLYLQPHTVLI 317
G T PA ++V K+GDPLYLQ +TV I
Sbjct: 33 GCTTHTPASNSVAKRGDPLYLQSNTVFI 60
>UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata
NPV-A|Rep: BRO-a - Mamestra configurata NPV-A
Length = 161
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 252 PAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARAST 431
P P N+ + P + +TV I + GV+ LIM S++ YA E + W EE+ + C+R T
Sbjct: 17 PKPRNM--ENAPKHWHSNTVFIDEAGVMSLIMNSEISYAKEFKKWFYEELFCKNCSRHFT 74
Query: 432 RRPSR 446
R +R
Sbjct: 75 REITR 79
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 300 PHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
PHTV + K G++Q+I K KL A +LQ WL EEV P+
Sbjct: 82 PHTVSVNKAGLVQMITKCKLKNADKLQKWLYEEVFPK 118
>UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticarsia
gemmatalis nucleopolyhedrovirus|Rep: Baculovirus
repeated ORF - Anticarsia gemmatalis nuclear
polyhedrosis virus (AgMNPV)
Length = 60
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 252 PAPDNVVKQGDPLYLQPHTVLITK 323
PA D V KQ DPLYLQPHT+LITK
Sbjct: 31 PAADTVAKQRDPLYLQPHTILITK 54
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
P QP+TV IT+ + +L KS LP A E Q W+ EEV+P
Sbjct: 79 PANWQPNTVFITEPAIYKLCTKSTLPEAEEFQDWIYEEVLP 119
>UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum
granulovirus|Rep: ORF130 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 237
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARAST 431
P QP+TV IT+ GV LI KSKL A + WL + +IPQ RA T
Sbjct: 51 PSNWQPNTVFITEAGVYALINKSKLAGAEIFREWLFDTIIPQ-MRRAKT 98
>UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura
granulovirus|Rep: Bro-5 - Spodoptera litura granulovirus
Length = 256
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
P QP+TV I++ GV LIM+ KL A + WL EEV+P+
Sbjct: 75 PANWQPNTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPE 116
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 40.7 bits (91), Expect = 0.032
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 294 LQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCC 416
L P T I K G+ +LI SK+P A E + W+ +++P C
Sbjct: 116 LHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLC 156
>UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep:
BRO-B - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 635
Score = 39.9 bits (89), Expect = 0.056
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 294 LQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCC 416
L P T I K G+ +LI SK+P A E + W+ +++P+ C
Sbjct: 74 LHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLC 114
>UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum
granulovirus|Rep: ORF62 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 211
Score = 39.1 bits (87), Expect = 0.098
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 252 PAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEE 398
P P+N P++ Q +T+ I K+G+I LI S LP A E + W L +
Sbjct: 82 PGPNN-----QPIHWQSNTLFINKDGIISLINNSTLPVAHEFKRWFLAQ 125
>UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococcus
phage SM1
Length = 239
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 DNVVKQGDPLYLQPHTVLITKE-GVIQLIMKSKLPYAVELQAWLLEEVIP 407
++ +KQG P +LI E G+ LI+ SKLP A E + W+ EV+P
Sbjct: 48 EDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAREFKRWVTSEVLP 97
>UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1;
Mamestra configurata NPV-B|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 134
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 264 NVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEE 398
NV P+ +P+T I K+G+I LI S LP A E + W L +
Sbjct: 4 NVQPVNTPIPWRPNTWFINKDGIISLINNSTLPVAHEFKKWFLAQ 48
>UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovirus
3e|Rep: Bro20 - Heliothis virescens ascovirus 3e
Length = 191
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 294 LQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCC 416
++ T I + G+ +LIM S++P A + Q W+ +++P+ C
Sbjct: 90 IRARTKFINRAGMFELIMSSRMPRARKFQRWVFSDLLPKLC 130
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 315 ITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARASTRRPSRWTQI 458
I + VI+LIM+SKLP A Q W+ EE++P + P Q+
Sbjct: 78 INEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAYMTPETVVQM 125
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 37.1 bits (82), Expect = 0.40
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 282 DPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
D L P +I + V +L+M+SK+P A + W++ EV+P
Sbjct: 79 DSFTLGPSANIIPERDVYRLVMRSKMPQAERFEEWVVSEVLP 120
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 36.7 bits (81), Expect = 0.52
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
+I + V +LI+KS LP A + +AW++EEV+P
Sbjct: 67 VIPESDVYRLIIKSNLPSAEKFEAWVMEEVLP 98
>UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 309
Score = 36.3 bits (80), Expect = 0.69
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 267 VVKQGDPLYLQPHTVLITKEG-VIQLIMKSKLPYAVELQAWLLEEVIP 407
+ K+ P+ + ++ EG V +LI++SKLP A + + W+ +EVIP
Sbjct: 108 ITKRSTPISGKVQSINFIPEGDVYRLIIRSKLPAAEKFELWVFDEVIP 155
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 36.3 bits (80), Expect = 0.69
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
++++ V++LI+ SKLP AV + W+ EEV+P
Sbjct: 68 ILSEPDVLRLIVGSKLPAAVRFERWVFEEVLP 99
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 35.9 bits (79), Expect = 0.91
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 309 VLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
++I++ G+ +LIM+S+ P A E Q W+ EV+P
Sbjct: 69 LIISEPGLYKLIMRSRKPEAKEFQRWVTHEVLP 101
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 35.9 bits (79), Expect = 0.91
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 315 ITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
I + + +LI+KSKLP A + + W+ EEV+P
Sbjct: 76 INEPNLYRLIVKSKLPQAEQFETWVFEEVLP 106
>UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep:
Bro-a - Helicoverpa armigera NPV
Length = 244
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWL 389
P ++P+T I + GV +LIM S++ YA + + WL
Sbjct: 76 PRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWL 110
>UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep:
BRO-f - Mamestra configurata NPV-A
Length = 357
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 300 PHTVLITKEGVIQLIMKSKLP-YAVE-LQAWLLEEVIP 407
PHTV + + G+ Q+I+ SKL VE + W+ EEV+P
Sbjct: 80 PHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLP 117
>UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22;
Gammaproteobacteria|Rep: Phage-related protein - Xylella
fastidiosa
Length = 530
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 282 DPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARASTRRPS 443
D L T +I++ +++LI+ SKLP A + W+ EE++P R + RP+
Sbjct: 219 DSLGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLP--TLRKTGNRPA 270
>UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein;
n=3; Clostridium perfringens|Rep: BRO family, N-terminal
domain protein - Clostridium perfringens (strain SM101 /
Type A)
Length = 191
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 300 PHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARAS 428
P V+ +EG+ I SKLP + + WL EV+P+ A+ +
Sbjct: 85 PKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGT 127
>UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein;
n=3; root|Rep: Uncharacterized phage-encoded protein -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 267
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
+I++ G+ QL +SKLP A Q W+ EEV+P
Sbjct: 68 VISEPGIYQLAGQSKLPTAEPFQDWIYEEVLP 99
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 285 PLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
P L T I G LI SK P+A++++ WL +EVIP
Sbjct: 168 PKTLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIP 208
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura granulovirus
Length = 368
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 345 MKSKLPYAVELQAWLLEEVIPQ 410
M+SKLP A E Q WL EEV+P+
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPE 22
>UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: BRO
family protein - Brucella suis
Length = 140
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 291 YLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
+ QP + +++ G+ +LIM+S+ P A + Q W+ + V+P
Sbjct: 70 FRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLP 108
>UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4;
root|Rep: Lj965 prophage antirepressor - Lactobacillus
johnsonii
Length = 278
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 306 TVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
T++ + G+ LI+ SKLP A + + W+ EV+P
Sbjct: 69 TIITNESGMYSLILSSKLPSAKKFKRWVTSEVLP 102
>UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: Phage
antirepressor protein - Streptococcus pyogenes serotype
M4 (strain MGAS10750)
Length = 244
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 RVGVYTIYPAPDN-VVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVI 404
R VY D V K P +Q + +I + G+ LI+ SKLP A +AW+ EV+
Sbjct: 42 RKAVYDHVDEEDKGVTKWNTPGGIQ-NISIINESGLYSLILSSKLPQAKIFKAWVTREVL 100
Query: 405 P 407
P
Sbjct: 101 P 101
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARASTRRPS 443
++++ V++LI SKLP A + + W+ EEV+P S PS
Sbjct: 70 ILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAAPS 113
>UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-117 - Ectocarpus siliculosus virus 1
Length = 524
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 306 TVLITKEGVIQLIMKSKLPYAVELQAWLLE 395
TV +T++GV +LIM+S+ P A Q W+ E
Sbjct: 68 TVFVTEKGVYKLIMRSRKPVAKPFQDWVFE 97
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 309 VLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
+L+++ G+ +LIM+S P A Q W+ +EV+P
Sbjct: 57 ILVSESGLYKLIMRSDKPQAKAFQDWVTKEVLP 89
>UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep:
Prophage antirepressor - Alkaliphilus metalliredigens
QYMF
Length = 276
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 261 DNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQCCARASTRRP 440
D + + D L +I + G+ LI+ SKLP A + W+ EV+P P
Sbjct: 53 DKALAKCDTLGGTQQMTIINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGVYMTP 112
Query: 441 SRWTQIMV 464
+ ++++
Sbjct: 113 DKIEEVLL 120
>UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 153
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
LI + G+ L++ SKLP A + + W+ EV+P
Sbjct: 68 LINESGLYSLVLSSKLPKAKQFRRWVTSEVLP 99
>UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8;
Pasteurellaceae|Rep: Uncharacterized protein HI1418 -
Haemophilus influenzae
Length = 201
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 315 ITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
I + + +LI+KS+ P A +AW+ EEV+PQ
Sbjct: 86 INEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQ 117
>UniRef50_UPI0000498E7A Cluster: hypothetical protein 132.t00007; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
132.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 1416
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 37 IKMAQVKIGEFKFGEDTF-TLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKY 213
+++ V+ GE E+ +L + E GNLQ K+V+ I +SL Y V++ +++ +
Sbjct: 856 LRVMGVERGENSINEEIIKSLIKLFENGNLQNKYVSSSIINSLLYSRVSNTVLICIEQGF 915
Query: 214 KTT 222
+T
Sbjct: 916 IST 918
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 267 VVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
VVK D L + I + G+ QLI KSKL A Q W+ EV+P
Sbjct: 54 VVKH-DSLGGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLP 99
>UniRef50_A6LSZ0 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 185
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 70 KFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYSESGSI 243
KF E +++ Y L +G + + +K+I + ++ N Q ++N+ KK+ Y S+
Sbjct: 22 KFEEYIYSMYYKLAEGKMNMSDFSKNILAYMEENNISQDKLINIQKKFLERYGVDPSL 79
>UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1;
Aedes taeniorhynchus iridescent virus|Rep: Putative
uncharacterized protein - Aedes taeniorhynchus
iridescent virus
Length = 406
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 IQNDVQRVGVYTIYPAPDNVVKQGDPL-YLQPHTVLITKEGVIQLIMKSKLPYAVELQAW 386
++ D VGV T + PL Y + + I + G+ LIM S P+A E Q
Sbjct: 70 VKQDHNAVGVQTT----STRLGSNSPLTYNEGKAIYINEPGLYALIMHSNAPFAEEFQDL 125
Query: 387 LLEEVIPQCCARASTRRPSRWTQIM 461
+ E+++P S + + TQ M
Sbjct: 126 VYEQILPSIRKYGSYQLEMQLTQAM 150
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 315 ITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
I + + ++I KS+ AVE Q W+ EEV+PQ
Sbjct: 69 INEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQ 100
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 294 LQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
LQ T+ I + + +LIM+SKLP A + W++ EV+P
Sbjct: 63 LQEMTI-IPERDLYRLIMRSKLPAAERFEEWVVAEVLP 99
>UniRef50_Q01FF7 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 312
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 KFVAKDIASSLKYVNCKQA-VIVNVD-KKYKTTYSESGS 240
K + + +AS +KY+ C+ ++VN K+YKT Y+E GS
Sbjct: 36 KTIPRAVASDVKYIECETCELLVNAAVKEYKTQYAEVGS 74
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
LIT+ V +LI+ S LP A + ++W+ +EV+P
Sbjct: 66 LITEGDVYRLIVGSNLPNAEKFESWVFDEVLP 97
>UniRef50_Q0IL69 Cluster: Bro-b; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-b - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 230
Score = 33.1 bits (72), Expect = 6.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 327 GVIQLIMKSKLPYAVELQAWLLEEVIPQCC 416
GV++L+ +S++ YA E WL+ ++P C
Sbjct: 73 GVLELLCRSRMKYAREFSYWLINVLLPSLC 102
>UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 248
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 264 NVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 410
N + D L T ++ + G+ LI+ S+ A E + W+ EVIPQ
Sbjct: 53 NTIPVTDSLGRLQETYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQ 101
>UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep:
Prophage antirepressor - Clostridium beijerinckii NCIMB
8052
Length = 251
Score = 32.7 bits (71), Expect = 8.5
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 312 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 407
+I + + +L+ KS+LP A + +AW+ +EV+P
Sbjct: 77 VIPEGDIYRLVAKSELPGAEKFEAWIFDEVLP 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,966,893
Number of Sequences: 1657284
Number of extensions: 12549971
Number of successful extensions: 31122
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 30148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31108
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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