Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060612.seq
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 109 EQGNLQVKFVAKDIASSLKYVNCKQAVIVN 198
           + GN++ + + + +   L +VN  QA++ N
Sbjct: 108 DDGNIKYRTILESVDHRLAFVNSAQALVKN 137


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 252 GIWYRPRLAVRRFVFFVNINY 190
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 252 GIWYRPRLAVRRFVFFVNINY 190
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 252 GIWYRPRLAVRRFVFFVNINY 190
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 252 GIWYRPRLAVRRFVFFVNINY 190
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 252 GIWYRPRLAVRRFVFFVNINY 190
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 266 VVWSGVYGIDPDSLYVVLYFLSTLTITACLQFTYF 162
           V+W  +  +  + L + +  L TL I+  +   YF
Sbjct: 400 VLWRSILAVFKEPLLIKVRLLQTLIISLVIGAIYF 434


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 266 VVWSGVYGIDPDSLYVVLYFLSTLTITACLQFTYF 162
           V+W  +  +  + L + +  L TL I+  +   YF
Sbjct: 400 VLWRSILAVFKEPLLIKVRLLQTLIISLVIGAIYF 434


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 217 FCIFCQH*LSQLVYNLHILN 158
           FC+F Q+ L +++  LH L+
Sbjct: 96  FCLFYQNKLIEVISKLHKLD 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,817
Number of Sequences: 336
Number of extensions: 3292
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)