Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060610.seq
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 181 3e-46
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 181 3e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 181 3e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 181 3e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 181 3e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 181 3e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 181 3e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 181 3e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 181 3e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 181 3e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 168 2e-42
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 107 8e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 2e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 58 4e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 35 0.055
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 6.3
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 8.3
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E +FQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E +FQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E +FQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E +FQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 54 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 173
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 174 CYVALDFEQEMATA 187
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 193 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 246
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 110 LDSGDGVTHTVPIYEGYALPHAILRL 135
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 84 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 143
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 203
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 204 CYVALDFEQEMATA 217
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 223 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 276
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 140 LDSGDGVTHTVPIYEGYALPHAILRL 165
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 97/134 (72%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 367 WYVALDFEQEMXTA 408
YVALDFEQEM TA
Sbjct: 218 CYVALDFEQEMATA 231
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC E LFQP + AG H T+Y SI KCD+DI
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRL 179
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 168 bits (409), Expect = 2e-42
Identities = 89/134 (66%), Positives = 94/134 (70%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPK+NREKMTQIMFETFNTPAMYV IQAVLSLYAS
Sbjct: 97 APEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTG 156
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDY+MKILTERGY+FTTTAEREIVRDIKEKL
Sbjct: 157 DGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKL 216
Query: 367 WYVALDFEQEMXTA 408
YVA DFE E+ A
Sbjct: 217 CYVAHDFESELAAA 230
Score = 83.8 bits (198), Expect = 9e-17
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
LEKSYELPDGQVIT GN RFRC EVLFQP + AG H TTY SI KCDVDI
Sbjct: 236 LEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDI 289
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 107 bits (256), Expect = 8e-24
Identities = 56/125 (44%), Positives = 72/125 (57%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 189
PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+
Sbjct: 102 PEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGD 161
Query: 190 XCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLW 369
++ LAG D+T+YL +L GY F + E EIVR++KE
Sbjct: 162 GVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENAC 221
Query: 370 YVALD 384
Y+ALD
Sbjct: 222 YLALD 226
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGV+H VPI +G+A+ HAI R+
Sbjct: 157 LDSGDGVTHAVPIVKGFAMKHAIQRM 182
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
++ SY LPD I N FR EVLF+P + G SI KCDVD+
Sbjct: 235 VKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDL 288
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (243), Expect = 3e-22
Identities = 55/129 (42%), Positives = 74/129 (57%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 189
P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD 161
Query: 190 XCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLW 369
+AG D+T YL+K+L +RGY+F +A+ E VR +KEKL
Sbjct: 162 GVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLC 221
Query: 370 YVALDFEQE 396
Y+A D EQE
Sbjct: 222 YIAYDVEQE 230
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVD 581
L + Y LPDG+VI G RF E+LFQP + AG + I D+D
Sbjct: 240 LSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDID 292
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
+DSGDGV+H P+YEG+AL H RL
Sbjct: 157 VDSGDGVTHICPVYEGFALHHLTRRL 182
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.5 bits (170), Expect = 2e-13
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-----------X 156
PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 112 PEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLT 171
Query: 157 XXXXXXXXXXXXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAER 336
C+P A I + +H +AG D+T ++ +L +R ++
Sbjct: 172 GLVIDSGDGVTHCIP-VADGYVIGSCIKH--IPIAGRDITYFIQSLLRDREHTIPAEQSY 228
Query: 337 EIVRDIKEKLWYVALDFEQEMXTAYPAAPSRSLTNFPTVRS 459
E+ + IKEK YV D +E Y ++ L + + S
Sbjct: 229 EVAKMIKEKFCYVCPDVMKEF-VKYDTDAAKWLRTYDGINS 268
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAI 244
+DSGDGV+H +P+ +GY + I
Sbjct: 175 IDSGDGVTHCIPVADGYVIGSCI 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 4 TSPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 150
++P EHPVL +E+ N +A REK+T+IMFE F PA Y++ VLS +A
Sbjct: 119 SNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFA 167
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILR 250
+DSG + VP+++GYA+ HA+++
Sbjct: 176 VDSGATQTSVVPVFDGYAVTHAVVK 200
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 471 NXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVD 581
N RF C E LF+P W G H + +I +C +D
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPID 466
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 406 AYPAAPSRSLTNFPTVRSSLSETXDSVAQRFSSNLV 513
A PAA RSL P R SL T +V+ R +NL+
Sbjct: 28 ASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNNLL 63
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Frame = +3
Query: 141 AVRVRSYHRYXCWTP----ATVSP--TPCPSTKDTHSPTP--SCV 251
A+ SY Y C TP AT P TP P+T T +P P +CV
Sbjct: 135 AIGCTSYRPYVCVTPVIMTATCPPITTPIPTTCPTPAPCPVKTCV 179
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 155 PDAYSESTAWMATYXAGVLNVSNMIWVIFSLL 60
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 RHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDI-KEKLWYVALDFEQEMXTAYP 414
R S +A D D + + S A E + + +EK+ V + E EM +P
Sbjct: 1190 RQIMSVMAAADFDDSVNNVKPSTSGSSNIPAGMEDLSEAEREKIMSVMANAEMEMGARFP 1249
Query: 415 AAPSRSLTNFPTVRSS 462
S+ T P+V SS
Sbjct: 1250 PPSSQIPTRSPSVMSS 1265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,237,153
Number of Sequences: 27780
Number of extensions: 256188
Number of successful extensions: 1018
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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