Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060610.seq
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 177 6e-45
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 174 3e-44
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 173 8e-44
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 172 2e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 172 2e-43
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 172 2e-43
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 172 2e-43
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 172 2e-43
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 170 6e-43
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 151 4e-37
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 150 9e-37
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 135 3e-32
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 93 2e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 66 2e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 54 1e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 52 2e-07
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 51 7e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 41 8e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 41 8e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 40 0.001
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 32 0.27
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.63
At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid t... 29 1.9
At3g28790.1 68416.m03593 expressed protein 28 4.4
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 27 7.7
At2g39030.1 68415.m04798 GCN5-related N-acetyltransferase (GNAT)... 27 7.7
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)... 27 7.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (430), Expect = 6e-45
Identities = 93/134 (69%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGYSFTT+AEREIVRD+KEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKL 218
Query: 367 WYVALDFEQEMXTA 408
Y+ALD+EQEM TA
Sbjct: 219 AYIALDYEQEMETA 232
Score = 81.0 bits (191), Expect = 6e-16
Identities = 38/54 (70%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EKSYELPDGQVIT G RFRC EVLFQP + AG H TTY SI KCDVDI
Sbjct: 238 VEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 174 bits (424), Expect = 3e-44
Identities = 92/134 (68%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKL 218
Query: 367 WYVALDFEQEMXTA 408
Y+ALDFEQE+ T+
Sbjct: 219 SYIALDFEQELETS 232
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EKS+ELPDGQVIT G RFRC EVLFQP + G H TTY SI KCDVDI
Sbjct: 238 VEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (421), Expect = 8e-44
Identities = 91/134 (67%), Positives = 98/134 (73%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKL 218
Query: 367 WYVALDFEQEMXTA 408
Y+ALD+EQE+ T+
Sbjct: 219 SYIALDYEQELETS 232
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EKS+ELPDGQVIT G RFRC EVLFQP + G H TTY SI KCDVDI
Sbjct: 238 VEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 172 bits (418), Expect = 2e-43
Identities = 91/134 (67%), Positives = 96/134 (71%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTD LMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
Y+ALD+EQE+ TA
Sbjct: 219 CYIALDYEQELETA 232
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G+ RFRC EVL+QP + AG H TTY SI KCDVDI
Sbjct: 238 VEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 172 bits (418), Expect = 2e-43
Identities = 91/134 (67%), Positives = 97/134 (72%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
+VA+D+EQEM T+
Sbjct: 219 SFVAVDYEQEMETS 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G RFRC EVLFQP + AG H TTY SI KCDVDI
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEG++LPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGFSLPHAILRL 180
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 172 bits (418), Expect = 2e-43
Identities = 91/134 (67%), Positives = 97/134 (72%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
+VA+D+EQEM T+
Sbjct: 219 SFVAVDYEQEMETS 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G RFRC EVLFQP + AG H TTY SI KCDVDI
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEG++LPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGFSLPHAILRL 180
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 172 bits (418), Expect = 2e-43
Identities = 91/134 (67%), Positives = 96/134 (71%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTD LMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
Y+ALD+EQE+ TA
Sbjct: 219 CYIALDYEQELETA 232
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G+ RFRC EVL+QP + AG H TTY SI KCDVDI
Sbjct: 238 VEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 172 bits (418), Expect = 2e-43
Identities = 91/134 (67%), Positives = 97/134 (72%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
+VA+D+EQEM T+
Sbjct: 219 SFVAVDYEQEMETS 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G RFRC EVLFQP + AG H TTY SI KCDVDI
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEG++LPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGFSLPHAILRL 180
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 170 bits (414), Expect = 6e-43
Identities = 92/134 (68%), Positives = 95/134 (70%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG 158
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG DLTD LMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKL 218
Query: 367 WYVALDFEQEMXTA 408
YVALD+EQE+ TA
Sbjct: 219 AYVALDYEQELETA 232
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
+EK+YELPDGQVIT G RFRC EVLFQP + G H TTY SI KCDVDI
Sbjct: 238 VEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDI 291
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 155 LDSGDGVSHTVPIYEGYALPHAILRL 180
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 151 bits (366), Expect = 4e-37
Identities = 78/130 (60%), Positives = 91/130 (70%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 189
PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Query: 190 XCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLW 369
P L G DLTDYL++I+TERGY++TT+AEREIVRDIKEKL
Sbjct: 149 RVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLC 208
Query: 370 YVALDFEQEM 399
YVALD+EQEM
Sbjct: 209 YVALDYEQEM 218
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVD 581
++K+Y LPDGQ IT RF C EVLFQP + +G H T SI KC VD
Sbjct: 227 IDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVD 279
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LD G+ VSHTVP+YEGYALPH ILRL
Sbjct: 144 LDLGERVSHTVPVYEGYALPHGILRL 169
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 150 bits (363), Expect = 9e-37
Identities = 77/133 (57%), Positives = 90/133 (67%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 189
PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+S
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD 160
Query: 190 XCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLW 369
P LAG DLT+YL KI+ ERGY++TT+AEREIVRDIKEKL
Sbjct: 161 GVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLC 220
Query: 370 YVALDFEQEMXTA 408
Y+A+D+EQEM A
Sbjct: 221 YIAVDYEQEMEKA 233
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
++++YELPDGQVIT G RFRC EVLFQ + +G H TTY SI KCDVDI
Sbjct: 239 IDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDI 292
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 156 LDSGDGVSHTVPIYEGYALPHAILRL 181
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 135 bits (326), Expect = 3e-32
Identities = 74/134 (55%), Positives = 87/134 (64%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+PEEHPVLLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+AS
Sbjct: 54 APEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSG 113
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
P LAG LT+YLMKI+ ERGY T+AERE+VRDIKE+
Sbjct: 114 DGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQF 170
Query: 367 WYVALDFEQEMXTA 408
Y+ALD+EQEM A
Sbjct: 171 GYIALDYEQEMEKA 184
Score = 70.5 bits (165), Expect = 8e-13
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVDI 584
++++YELPDGQVIT G RFRC EVLFQP + +G H TY SI KCD DI
Sbjct: 190 IDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDI 243
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAILRL 253
LDSGDGVS+ VPIYEG ALPHAILRL
Sbjct: 110 LDSGDGVSYIVPIYEGSALPHAILRL 135
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/130 (36%), Positives = 72/130 (55%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXX 186
+P + +LLT+ PLNP NREKM + MFE +N +++ IQAVL+LYA
Sbjct: 98 NPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157
Query: 187 XXCLPHRAHLRRIRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 366
+ P +AG +T YL+ +L+ RGY+ TA+ E VR+IKEKL
Sbjct: 158 DGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKL 217
Query: 367 WYVALDFEQE 396
Y++ D+++E
Sbjct: 218 CYISYDYKRE 227
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 423 LEKSYELPDGQVITXGNXRFRCXEVLFQPCSWVWKLAGFHXTTYXSIXKCDVD 581
L K+Y LPDG+VI G RF+ E LF P + G + I + D+D
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 289
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 65.7 bits (153), Expect = 2e-11
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 189
PE+H LLTE+PL P +RE +I+FETFN P +Y+A+ +VL+L A
Sbjct: 117 PEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVV 176
Query: 190 XCLPHRA-HLRRIR----TPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDI 354
+ A H+ + + +AG D+T ++ +++ ERG + ++ R +
Sbjct: 177 VDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKV 236
Query: 355 KEKLWYVALDFEQE 396
KE Y D +E
Sbjct: 237 KEMYCYTCSDIVKE 250
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 176 LDSGDGVSHTVPIYEGYALPHAI 244
+D GDG +H VP+ EGY + I
Sbjct: 177 VDVGDGATHVVPVAEGYVIGSCI 199
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 153
P EHP+LL E PLN + REK ++MFE + PA+++A VL+ +A+
Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Frame = +3
Query: 432 SYELPDGQVITXGNXRFRCXEVLFQP------------CSWVWKLAGFHXTTYXSIXKCD 575
SYELPDGQ + G RF+ +V+F P + + G SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 576 VDI 584
VDI
Sbjct: 350 VDI 352
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Frame = +1
Query: 16 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXXXC 195
+HP+L+TE NP +R KM +++FET+ PA+ + A S + C
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLC 175
Query: 196 --LPHRAHLRRIRTPPRHPAS---GLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKE 360
+ + P + S + G +TDYL ++L+ + ++ E D+K
Sbjct: 176 PGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKL 235
Query: 361 KLWYVALDFEQEM 399
+ Y+A D+ E+
Sbjct: 236 EHCYIAPDYASEI 248
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 16 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 150
E +L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYA 132
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 429 KSYELPDGQVITXGNXRFRCXEVLFQP 509
+ + LPDGQVI+ G R+ E LFQP
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQP 247
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 40.7 bits (91), Expect = 8e-04
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 55 KANREKMTQIMFETF---NTPAMYVAIQAVLSLYASXXXXXXXXXXXXXCLPHRAHLR-R 222
KA+R ++ +F N PA+ QAVL+LYA+ + L +
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGK 271
Query: 223 IRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLWYVALDFEQEM 399
+ G LT +L + + E SF + VR +KEKL YVALD++ E+
Sbjct: 272 VMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL 327
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 40.7 bits (91), Expect = 8e-04
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 55 KANREKMTQIMFETF---NTPAMYVAIQAVLSLYASXXXXXXXXXXXXXCLPHRAHLR-R 222
KA+R ++ +F N PA+ QAVL+LYA+ + L +
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGK 271
Query: 223 IRTPPRHPASGLAGXDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLWYVALDFEQEM 399
+ G LT +L + + E SF + VR +KEKL YVALD++ E+
Sbjct: 272 VMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL 327
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Frame = +1
Query: 7 SPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASXXXXXXXXXX 183
+P +LLTEAPL+ + + +++FE F ++Y+A Q+++ LY +
Sbjct: 91 APSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSK 150
Query: 184 XXXCLPHRAHLRRIRTPP-------RHPAS--GLAGXDLTDYLMKILTERGYSFTTTAER 336
L P H L G T+YL ++++ R S E
Sbjct: 151 TQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDET 208
Query: 337 EIVRDIKEKLWYVALDFEQEMXTA 408
+V D KEKL +V+LD +++ A
Sbjct: 209 FLVDDAKEKLCFVSLDLLRDLRLA 232
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 10 PEEHPVLLTEAPLNPKANREK 72
P EHP+LL E PLN + REK
Sbjct: 116 PTEHPMLLAEPPLNSQQQREK 136
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 39 GSPQPQGQQREDDPDHVR---NIQHARXVRRHPSRALAVRVRSYHR 167
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 149
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 207 CPSTKDTHSPTPSCVWLSRXRPHRLPHEDPHRA 305
CPS K H P+PS +P PH P A
Sbjct: 31 CPSPKPKHKPSPSPKPKPNPKPKPTPHPSPSPA 63
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 180 TPATVSP-TPCPSTKDTHSPTPS 245
TP+T +P TP PST +PTPS
Sbjct: 282 TPSTPTPSTPTPSTPTPSTPTPS 304
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 180 TPATVSP-TPCPSTKDTHSPTPS 245
TP+T +P TP PST +PTPS
Sbjct: 287 TPSTPTPSTPTPSTPTPSTPTPS 309
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 195 SPTPCPSTKDTHSPTPS 245
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 180 TPATVSPTPCPSTKDTHSPTPSCVWLSRXRPHRLPHEDPHRA 305
+PAT SP+P + +HSP+ S P P P A
Sbjct: 203 SPATPSPSPKSPSPVSHSPSHSPAHTPSHSPAHTPSHSPAHA 244
>At2g39030.1 68415.m04798 GCN5-related N-acetyltransferase (GNAT)
family protein similar to SP|Q9SMB8 Tyramine
N-feruloyltransferase 4/11 (EC 2.3.1.110)
(Hydroxycinnamoyl- CoA: tyramine
N-hydroxycinnamoyltransferase) {Nicotiana tabacum};
contains Pfam profile PF00583: acetyltransferase, GNAT
family
Length = 228
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 192 VSPTPCPSTKDTHSP--TPSCVWLSRXRPHRLPHEDPHRARLL 314
+SP+P P+T D SP TP +L + LP EDP R + L
Sbjct: 82 ISPSPFPTTHDASSPDFTP---FLETHKVD-LPIEDPDREKFL 120
>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 183 PATVSPTPCPSTKDTHSPTPSCVWLSRXRPHR 278
P +V+ T PST +P P WL + +P R
Sbjct: 194 PPSVTLTLSPSTVAAAAPQPPIPWLQQQQPER 225
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,788,776
Number of Sequences: 28952
Number of extensions: 247132
Number of successful extensions: 851
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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