Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060609.seq
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 120 8e-28
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 109 3e-24
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 87 1e-17
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 83 2e-16
08_01_0397 - 3509186-3510291,3510322-3512335 79 2e-15
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 67 1e-11
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 65 4e-11
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 63 2e-10
03_05_0865 - 28365430-28367640 48 7e-06
06_03_1255 + 28780181-28781172,28782065-28782932 44 9e-05
02_01_0381 - 2764331-2764342,2768966-2769907 44 9e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 44 1e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 42 6e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 41 8e-04
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 39 0.003
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 38 0.006
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 37 0.013
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 37 0.013
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 37 0.013
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 35 0.052
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 35 0.052
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 35 0.052
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 35 0.052
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 35 0.069
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 34 0.091
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 34 0.12
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.16
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 33 0.21
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 33 0.28
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 33 0.28
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 33 0.28
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 32 0.37
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 31 0.64
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 31 0.64
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 31 1.1
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 30 1.5
10_01_0008 - 89397-90404,90496-90572,91412-91511 30 2.0
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 29 2.6
11_08_0089 - 28288129-28288832,28290702-28290831,28291563-282918... 29 3.4
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 3.4
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 29 4.5
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 29 4.5
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 29 4.5
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 28 6.0
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 28 6.0
03_02_0189 - 6253659-6255380 28 6.0
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 28 6.0
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 28 6.0
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 7.9
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 7.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 120 bits (290), Expect = 8e-28
Identities = 58/132 (43%), Positives = 77/132 (58%)
Frame = +1
Query: 250 PSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 429
P D SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 430 YVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINNQPPIR 609
Y Q + G+ EPTPIQ+QGWP+A+ R + + K L H+ QP +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLE 225
Query: 610 RGDGPIALVLAP 645
+GDGPI L+LAP
Sbjct: 226 QGDGPIVLILAP 237
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 109 bits (261), Expect = 3e-24
Identities = 55/137 (40%), Positives = 77/137 (56%)
Frame = +1
Query: 235 SEHASPSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 414
++ A+ + D L F KNFY P+V + EVE YR E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 415 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINN 594
FP+YV Q + G+ EPTPIQ+QGWP+A+ R + + K + H+N
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNA 155
Query: 595 QPPIRRGDGPIALVLAP 645
QP + GDGPI LVLAP
Sbjct: 156 QPILAPGDGPIVLVLAP 172
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/134 (32%), Positives = 70/134 (52%)
Frame = +1
Query: 262 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 441
++ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 442 GVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGDG 621
+ GY++PT IQ Q PI + R + K K + HI +QP + + +G
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG 292
Query: 622 PIALVLAPYQRV*H 663
PI +V AP + + H
Sbjct: 293 PIGVVCAPTRELAH 306
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/127 (34%), Positives = 65/127 (51%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KN Y + + EV YR N E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 445 VKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGDGP 624
+K +G+++P PIQAQ PI M R + K K L H+ +QPP+ GDGP
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGP 359
Query: 625 IALVLAP 645
I L++AP
Sbjct: 360 IGLIMAP 366
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/127 (33%), Positives = 64/127 (50%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KNFY + K + EV YR E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 445 VKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGDGP 624
+K +G+++P IQAQ PI M R + K K L H+ +QP + GDGP
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGP 498
Query: 625 IALVLAP 645
I L++AP
Sbjct: 499 IGLIMAP 505
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 66.9 bits (156), Expect = 1e-11
Identities = 40/102 (39%), Positives = 50/102 (49%)
Frame = +1
Query: 340 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 520 *LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGDGPIALVLAP 645
+A K K HI R GP LVLAP
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAP 230
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = +1
Query: 241 HASPSWDSVSLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEA 417
H + S++P ++ F P+ P++ + YR +HEVT G V P FE
Sbjct: 555 HNHGPFPEASMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEAT 609
Query: 418 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHI--- 588
FP + Q + G+ PTPIQAQ WP+A+ R +A K K H+
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRY 669
Query: 589 NNQPPIRRGDGPIALVLAP 645
N P + GP LVLAP
Sbjct: 670 QNNPML----GPTVLVLAP 684
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/102 (36%), Positives = 50/102 (49%)
Frame = +1
Query: 340 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 520 *LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGDGPIALVLAP 645
+A K K P + + + DGP LVL+P
Sbjct: 220 IVAVAKTGSGKTLGYLI-PGFILLKRLQHNSRDGPTVLVLSP 260
>03_05_0865 - 28365430-28367640
Length = 736
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 346 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*L 525
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + +R +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 526 A*FKRVPAKRWPTSCQPLWHINNQPPI---RRGDGPIALVLAP 645
+ K L +I PPI +GP A+V+AP
Sbjct: 357 GIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAP 399
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + R + + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 484 AQGWPIAMLER 516
QG P+A+ R
Sbjct: 201 VQGLPVALSGR 211
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAIVAHKQ 593
+ G+++ L + G++++G+ TGSGKTL ++LP I+A Q
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQ 237
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +1
Query: 307 PTVLKRSPY-EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + +E R + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 484 AQGWPIAMLERI*LA*FKRVPAKRWPTSCQPLWHINNQP----PIRRGDGPIALVLAP 645
QG P+ + R + + + PL + Q PI G+GP +++ P
Sbjct: 210 VQGLPVVLSGRDMIG-IAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICP 266
Score = 35.1 bits (77), Expect = 0.052
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAIVAHKQ 593
G++++G+ TGSGKTL ++LP I+ Q
Sbjct: 219 GRDMIGIAFTGSGKTLVFVLPLIMVALQ 246
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLE 513
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 514 RI*LA*FKRVPAKRWPTSCQPLWHINNQPPIRRGD--GPIALVLAP 645
R L K + H ++ R D GP+A+VLAP
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAP 265
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
V VSG +V P FE A + V + V GY+ PTP+Q PIA+ R
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
G++L+ QTGSGKT A+ LP +
Sbjct: 121 GRDLMACAQTGSGKTAAFCLPVV 143
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRV 543
V SG +V P+ F E + D + + ++ Y +PTP+Q PI++ R +A +
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA-CAQT 283
Query: 544 PAKRWPTSCQPLWH--INNQPPIR-RGDG---PIALVLAP 645
+ + C P+ ++++PP R RG P+AL+L+P
Sbjct: 284 GSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSP 323
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRV 543
V SG +V P F E + D + + ++ Y +PTP+Q PI++ R +A +
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA-CAQT 369
Query: 544 PAKRWPTSCQPLWH--INNQPPIR-RGDG---PIALVLAP 645
+ + C P+ + ++PP R RG P+AL+L+P
Sbjct: 370 GSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSP 409
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 349 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI + R
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/32 (50%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +3
Query: 504 YVGKNLVGVVQTGSGKTLAYILPAI-VAHKQP 596
Y+GK+++ +TG+GKT+A++LPAI V K P
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLP 521
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
GK+++G +TGSGKTLA+++PAI
Sbjct: 133 GKDVMGAAKTGSGKTLAFLIPAI 155
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
KD G +R + L GK+++ +TG+GKT+A++LPAI
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAI 65
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAIVA 584
G++++GV QTGSGKT A+ LP I A
Sbjct: 20 GRDVIGVGQTGSGKTAAFALPIIQA 44
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 35.1 bits (77), Expect = 0.052
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = +3
Query: 492 LADSYVGKNLVGVVQTGSGKTLAYILPAIVA 584
L + G++++G +TGSGKTLA+++P +++
Sbjct: 111 LPHALCGRDVLGAAKTGSGKTLAFVIPVLMS 141
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 495 ADSYVGKNLVGVVQTGSGKTLAYILPAI 578
A ++ GK+++G +TGSGKTLA+ LP +
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPIL 202
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 445 VKTMGYKEPTPIQAQGWPIA 504
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAIVA 584
C G + + + + G++L+G+ QTGSGKT A+ LP I A
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQA 102
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 34.7 bits (76), Expect = 0.069
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*FKRV 543
V SG EV P+ F E + + ++ Y PTP+Q PI++ R +A +
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMA-CAQT 201
Query: 544 PAKRWPTSCQPLWH-INNQPPIRRGDG-------PIALVLAP 645
+ + C P+ I PP +R P+AL+L+P
Sbjct: 202 GSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSP 243
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
KD G ++ + L G++++ +TG+GKT+A++LPAI
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAI 133
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
C G++ A + + G++++G+ +TGSGKT A+ LP +
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPIL 136
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAY---ILPAIVAHKQ 593
GK++VG +TG+GKTLA+ IL AI+ H +
Sbjct: 135 GKDMVGRAKTGTGKTLAFGIPILDAIIRHNE 165
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
GK++V +TGSGKT AY+LP +
Sbjct: 120 GKDVVAKAKTGSGKTFAYLLPML 142
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
G +LVG +TG GKTLA++LP +
Sbjct: 141 GHDLVGRARTGQGKTLAFVLPIL 163
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAIV 581
G++ +G+ TGSGKT+A+ +PA++
Sbjct: 129 GRDFIGIAATGSGKTIAFGVPALM 152
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 498
P+ F P V K G++ P+PIQA WP
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWP 124
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 429 LCATRCKDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
L A +D + + +G +++ +TGSGKTLA+++PAI
Sbjct: 96 LTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAI 145
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
FE + V +GV+ GY+ PTPIQ + P+ +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLIL 61
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
G ++ + +TGSGKT A+++P I
Sbjct: 63 GHDIAAMARTGSGKTAAFLVPMI 85
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
C+ G Q+ ++ + + G+++ G TGSGKT A+ LP +
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 253
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
F E N + + + +GY++PTPIQA P+A+ R
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
D G +T + L GK+++ +TG+GK+ A++LPAI
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAI 401
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 429 LCATRCKDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
LCA G Q + + + G++++ TG+GKTLAY+ P +
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILP 572
GK+++G +TG+GKTLA+ +P
Sbjct: 130 GKDMIGRARTGTGKTLAFGIP 150
>10_01_0008 - 89397-90404,90496-90572,91412-91511
Length = 394
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 654 SLVRRQDQSNRTITSPNRRLVVYVPQWLARCRPTFCRNP 538
S R + N T+T ++LVV++ +WL P F NP
Sbjct: 75 SYAREEQGYNVTLTQTGQQLVVFLTKWLGD-HPEFASNP 112
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
G ++V TGSGKTLAY+LP +
Sbjct: 147 GTSVVLGSHTGSGKTLAYLLPLV 169
>11_08_0089 -
28288129-28288832,28290702-28290831,28291563-28291856,
28292000-28292098,28292199-28292285,28292524-28292805
Length = 531
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 564 CRPTFCRNPFELRQLNSFQHSYRPALSLNR---RRFFVTHC 451
CRPT + F+ ++ ++Y A SLNR +R+ +T C
Sbjct: 486 CRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFC 526
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
GK+ + Q+GSGKTLAY+ P +
Sbjct: 277 GKSCIIGDQSGSGKTLAYLCPVV 299
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAI 578
G++L+ +TG+GKTLA+ +P I
Sbjct: 167 GRDLIARAKTGTGKTLAFGIPMI 189
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 510 GKNLVGVVQTGSGKTLAYILPAIVA 584
G++ + QTGSGKTLAY+L A
Sbjct: 78 GQDCILHAQTGSGKTLAYLLSVFSA 102
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI-VAHKQPT 599
K G +R ++ + K++ TGSGKTLA+++P + + ++P+
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPS 90
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
+ G +R + + G +++ + G+GKT A+ +PA+
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 206
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
+ G +R + + G +++ + G+GKT A+ +PA+
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 183
>03_02_0189 - 6253659-6255380
Length = 573
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 537 TGSGKTLAYILPAI 578
TGSGKTLAY+LP +
Sbjct: 177 TGSGKTLAYLLPIL 190
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVVQTGSGKTLAYILPAI 578
+ G +R + + G +++ + G+GKT A+ +PA+
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 193
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 537 TGSGKTLAYILPAI 578
TGSGKTLAY+LP +
Sbjct: 639 TGSGKTLAYLLPIL 652
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 283 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 405
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 325 SPYEVEEYRNNHEVTVSGVEVHN 393
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,663,624
Number of Sequences: 37544
Number of extensions: 326656
Number of successful extensions: 927
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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