Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060608.seq
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.7  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   6.7  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +3

Query: 294 QSNGYVPSHTGYQPYEPPTADIYTQQSYSAPSSYQ 398
           Q NGYV +  G        A    Q S SA   YQ
Sbjct: 377 QQNGYVSASNGQSAQAGGPAGGQAQPSQSAAQQYQ 411


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +1

Query: 394 IKMVVTLHRQLLRSLLXIVPAVXERAMDTQQVVQEVTKRW 513
           +K VV L ++  ++   +     +  +D  +++QEV+ RW
Sbjct: 290 VKRVVMLFKKSPKASQMLADTQKKLNLDQLKMIQEVSTRW 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,333
Number of Sequences: 2352
Number of extensions: 8567
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)