Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060607.seq
(554 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 46 3e-05
SB_42298| Best HMM Match : Polyoma_agno (HMM E-Value=8.2) 45 4e-05
SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2) 45 4e-05
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 45 5e-05
SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1) 44 8e-05
SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9) 44 1e-04
SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2) 42 4e-04
SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2) 41 6e-04
SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 40 0.001
SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09) 37 0.010
SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9) 37 0.013
SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23) 36 0.017
SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_49038| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8) 28 5.9
>SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL K+ P ++ L K F Y+ Q ++IDE+++ +KGRL F Q + KR GIK +
Sbjct: 308 KLHKVRPFLDALEKSFSEHYLPSQNVSIDEAMVKYKGRLGFKQYMPIKR---GIKIWVHA 364
Query: 287 ESXTGXLWQMEXTRAK 240
++ T + +M+ K
Sbjct: 365 DAETAFISEMQVYTGK 380
>SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL K+ P+++ + ++ S Y+ + +A+DE+++ +KGRL Q + K + GIK +E
Sbjct: 117 KLHKVRPVVDRVLEQCRSEYLPTKNVALDEAMIKYKGRLGMKQYMPNKPIKRGIKVWECT 176
Query: 287 ESXTG 273
+S G
Sbjct: 177 DSSNG 181
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL + P+I+ L + F Y + AIDE L+ +KGRL F Q + K A+ GIK +
Sbjct: 589 KLFHVRPLIKRLSETFLEAYKPNRENAIDEGLIKYKGRLGFKQYMPLKPAKRGIKVWLRA 648
Query: 287 ESXT 276
+S T
Sbjct: 649 DSHT 652
>SB_42298| Best HMM Match : Polyoma_agno (HMM E-Value=8.2)
Length = 327
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L KI P+I+H+ K + Y + ++ DE ++ ++GRLSF Q + + + IK +
Sbjct: 84 RLFKIQPVIDHVLGKIKANYQPRRDLSEDEGMIGFRGRLSFKQYMPARPTKYRIKVWMCA 143
Query: 287 ESXTGXL--WQMEXTRAKGXHMWYKXGXRKSAGKSLTSRRV 171
++ G L ++ T + RKSA K L S++V
Sbjct: 144 DASNGLLEHFEAHNTFVCWTVRVNRKDLRKSAKKKLLSKKV 184
>SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2)
Length = 913
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -1
Query: 473 PTKLDKIIPIIE-HLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSY 297
P K I II+ F + + + ++IDE+++ +KGRLSF Q + K + GIK +
Sbjct: 533 PYKAKPFIDIIQAKCLDNFEAYFATKGELSIDEAMIKYKGRLSFVQYMPMKPTKRGIKVF 592
Query: 296 ELCESXTGXL 267
LC++ +G +
Sbjct: 593 CLCDASSGYM 602
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + I++DE L+ +KGRL F Q + K + GIK +
Sbjct: 110 RLFKVRPVLSDVLKSIQQTYEPSKDISVDEGLIAFKGRLGFRQYMPAKPTKYGIKVWMAA 169
Query: 287 ESXTG 273
++ G
Sbjct: 170 DANNG 174
>SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + I++DE ++ +KGRL F Q + K + GIK +
Sbjct: 207 RLFKVRPVLSDVLKSIQQAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAA 266
Query: 287 ESXTGXLWQMEXTRAKGXHMW 225
++ G + + + +W
Sbjct: 267 DANNGYVCNYKVYLGQEKWLW 287
>SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)
Length = 567
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + I++DE ++ +KGRL F Q + K + GIK +
Sbjct: 207 RLFKVRPVLSDVLKSIQQAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAA 266
Query: 287 ESXTG 273
++ G
Sbjct: 267 DANNG 271
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 159 IVLNLXRPLFDKGHTLIMDNFYNAPLLSRILKVQHKTDSMGTLRLNREFVP 7
+V+++ +P + + DNF+ L L + KT + GT+R+NR +P
Sbjct: 295 VVMDMAKPFLNSYRHIFCDNFFTTVRLFDHL-LDQKTYACGTVRVNRRELP 344
>SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + I++DE ++ +KGRL F Q + K + GIK +
Sbjct: 207 RLFKVRPVLSDVLKSIQQAYKPSKDISVDEGMIAFKGRLCFRQYMPAKPTKYGIKVWMAA 266
Query: 287 ESXTG 273
++ G
Sbjct: 267 DANNG 271
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 159 IVLNLXRPLFDKGHTLIMDNFYNAPLLSRILKVQHKTDSMGTLRLNREFVP 7
+V+++ +P + + DNF+ L L + KT + GT+R+NR +P
Sbjct: 295 VVMDMAKPFLNSYRHIFCDNFFTTVRLFDHL-LDQKTYACGTVRVNRRELP 344
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = -1
Query: 392 IAIDESLLLWKGRLSFAQKIATKRARVGIKSYELCESXTGXL 267
++IDE+++ +KGRLSF + K + GIK + LCES TG L
Sbjct: 1575 LSIDEAMIKYKGRLSFVYYMPMKPVKRGIKVFCLCESSTGFL 1616
>SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9)
Length = 485
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIK 303
KL + P+I+ L + F Y + AIDE L+ +KGRL F Q + K A+ GIK
Sbjct: 389 KLFHVRPLIKRLSETFLEAYKPNRENAIDEGLIKYKGRLGFKQYMPLKPAKRGIK 443
>SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/59 (32%), Positives = 38/59 (64%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYEL 291
KL K+ P+++ + ++ S Y+ + +AIDE+++ +KGRL Q + K + GIK+ ++
Sbjct: 31 KLHKVRPVVDRVLEQCRSEYLPMKNVAIDEAMIKYKGRLGIKQYMPNKPIKRGIKTNDV 89
>SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + I++DE + +KGRL F Q + K + GIK +
Sbjct: 170 RLFKVRPVLSDVLKSIQQAYEPSKDISVDEGTIAFKGRLGFRQYMPAKPTKYGIKVWMAA 229
Query: 287 ESXTG 273
++ G
Sbjct: 230 DANNG 234
>SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2)
Length = 492
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/97 (29%), Positives = 45/97 (46%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL I P+I L + F Y + AIDE L+ +KGRL++ Q + K + GIK +
Sbjct: 395 KLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVWIRA 454
Query: 287 ESXTGXLWQMEXTRAKGXHMWYKXGXRKSAGKSLTSR 177
+S T + + + K +KS G + R
Sbjct: 455 DSITHYVSRFQVYTGKPQQGQEARPRQKSCGGTFHRR 491
>SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2)
Length = 725
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL I P+I L + F Y + AIDE L+ +KGRL++ Q + K + GIK +
Sbjct: 207 KLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVWIRA 266
Query: 287 ESXT 276
+S T
Sbjct: 267 DSIT 270
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 389 AIDESLLLWKGRLSFAQKIATKRARVGIKSYELCESXT 276
AIDE L+ +KGRL++ Q + K + GIK + +S T
Sbjct: 374 AIDEGLVKFKGRLAYKQYMQMKPVKRGIKVWIRADSIT 411
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 162 QIVLNLXRPLFDKGHTLIMDNFYNAPLLSRILKVQHKTDSMGTLRLNREFVPR 4
++V L L KG+ L DNF+++ L L ++ + + T R NR+ P+
Sbjct: 294 RVVEELSTDLIGKGYHLYFDNFFSSVGLMASL-LERRIYATATTRQNRKEFPK 345
>SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = -1
Query: 473 PTKLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYE 294
P + I + + ++ S Y+ + +A+DE+++ +KGRL Q + K + GIK +E
Sbjct: 41 PATVRPFISSSDRVLEQCRSEYLTTKNVAVDEAMIKYKGRLGIRQYMPNKPIKRGIKVWE 100
Query: 293 LCESXTGXLWQMEXTRAK 240
+S G + + K
Sbjct: 101 CADSSNGYVLDFQVYTGK 118
>SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + ++DE ++ +KGRL F Q + K + GIK +
Sbjct: 58 RLFKVRPVLSDVLKSIQQAYEPSKDKSVDEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAA 117
Query: 287 ESXTG 273
++ G
Sbjct: 118 DAKLG 122
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL K+ ++H ++ +LY Q +AIDE ++ K R Q I K + G+K + L
Sbjct: 276 KLRKVRSFLDHFKERCKALYQPFQNVAIDERMVKSKHRSGMRQYIKNKPTKWGLKLWVLA 335
Query: 287 ESXTGXLWQME 255
+S G + +
Sbjct: 336 DSTNGYTYDFD 346
>SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ ++ + K Y + I++DE ++ +KGRL F Q + K + GIK +
Sbjct: 58 RLFKVRLVLSDVLKSIQQAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAA 117
Query: 287 ESXTG 273
++ G
Sbjct: 118 DANNG 122
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 159 IVLNLXRPLFDKGHTLIMDNFYNAPLLSRILKVQHKTDSMGTLRLNREFVP 7
+V+++ +P + + DNF+ L L + KT + GT+R+NR +P
Sbjct: 146 VVMDMAKPFLNSYRHIFCDNFFTTVRLFEHL-LDQKTYACGTVRVNRRELP 195
>SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ P++ + K Y + ++DE ++ +KGRL F Q + K + GIK +
Sbjct: 110 RLFKVRPVLSDVLKNIQQAYGPSKDKSVDEGMIAFKGRLCFRQYMPAKPMKYGIKVWMAA 169
Query: 287 ESXTG 273
++ G
Sbjct: 170 DANNG 174
>SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIK 303
KL I P+I L + F Y + AIDE L+ +KGRL++ Q + K + GIK
Sbjct: 69 KLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIK 123
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
KL K+ ++H ++ +LY Q +AIDE ++ K R Q I K + G+K + L
Sbjct: 276 KLRKVRSFLDHFKERCKALYQPFQNVAIDEKMVKSKHRSGMRQYIKNKPTKWGLKLWVLA 335
Query: 287 ES 282
+S
Sbjct: 336 DS 337
>SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09)
Length = 590
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATK 324
+L K+ P++ ++ K Y + I++DE ++ +KGRL F Q + K
Sbjct: 83 RLFKVRPVLSNVLKSIQQTYEPSKDISVDEGMIAFKGRLGFRQYMPVK 130
>SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = -1
Query: 467 KLDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELC 288
+L K+ ++ + K Y + ++DE ++ +KGRL F Q + K + GIK +
Sbjct: 86 RLFKVRTVLSDVLKNIQQAYEPSKDKSVDERMIAFKGRLCFRQYMPAKPMKYGIKVWMAA 145
Query: 287 ESXTG 273
++ G
Sbjct: 146 DANNG 150
>SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9)
Length = 302
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 374 LLLWKGRLSFAQKIATKRARVGIKSYELCESXTGXLWQME 255
++ W+GRLSF Q IA K R GIK + L +S + +++ +
Sbjct: 1 MIPWRGRLSFRQFIANKPVRFGIKVWVLADSESKYVYRQQ 40
>SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23)
Length = 299
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -1
Query: 464 LDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELCE 285
L K+ ++ + K Y + ++DE ++ +KGRL F Q + K + GIK + +
Sbjct: 200 LFKVRTVLSDVLKNIQQAYEPSKDKSVDEGMIAFKGRLCFRQYMPAKPMKYGIKVWMAAD 259
Query: 284 SXTG 273
+ G
Sbjct: 260 ANNG 263
>SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = -1
Query: 398 QXIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELCESXTG 273
+ I++DE ++ +KGRL+F Q + K + GIK++ ++ G
Sbjct: 19 ENISVDEGMIKFKGRLAFRQYMPAKPTKYGIKNWMAADARNG 60
>SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 392 IAIDESLLLWKGRLSFAQKIATKRARVGIKSYELCESXTG 273
++++E ++ +KGRL F Q + K + GIK + + G
Sbjct: 88 MSVNEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAADPNNG 127
>SB_49038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 464 LDKIIPIIEHLXKKFXSLYVLEQXIAIDESLLLWKGRLSF 345
L K+ P++ + K + I++DE ++ +KGRL F
Sbjct: 66 LFKVCPVLSDVLKNIQEGNGPSKNISVDEGMIAFKGRLGF 105
>SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8)
Length = 1150
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 470 TKLDKIIPIIEHLXKKFXSLYVLEQXIAIDESL 372
T+ + ++PIIE L K F E +AI SL
Sbjct: 832 TRAESLVPIIEELHKSFDGPRTFEPLLAIMRSL 864
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,760
Number of Sequences: 59808
Number of extensions: 236913
Number of successful extensions: 606
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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