Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060604.seq
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2849|AAF49387.1| 1059|Drosophila melanogaster CG14060-P...    29   4.3  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   5.7  
AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-P...    29   5.7  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   5.7  
BT011350-1|AAR96142.1|  489|Drosophila melanogaster RH05790p pro...    29   7.6  
AY119154-1|AAM51014.1|  380|Drosophila melanogaster RE65163p pro...    29   7.6  
AE014134-2891|AAN11175.1|  475|Drosophila melanogaster CG5674-PC...    29   7.6  
AE014134-2886|AAN11174.1|  489|Drosophila melanogaster CG5674-PA...    29   7.6  

>AE014296-2849|AAF49387.1| 1059|Drosophila melanogaster CG14060-PA
           protein.
          Length = 1059

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 191 PRIVSVYLKSSSPYLEENKRNPKSVQNQSAP 283
           P +  V  +  +P  EE  + PKSVQN+S P
Sbjct: 484 PELAIVSEELKTPTSEEQAKKPKSVQNESQP 514


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 240   KTKEILSLSRTSPRHTTSTVS*KKTQPL-YPERRLNHRILKEDSTTVSTYYIH*IKEEKS 416
             +T+E   + +  P+ ++      + +P+ + E      I +E  T+VS   +    +EK 
Sbjct: 10193 RTQEEEVVKKKKPKKSSKPEEGLQFEPIEFEEMERTSDIREESDTSVS---VDTSTQEKP 10249

Query: 417   LYPERRKITVS*RKNQ 464
             +Y +++K+T S +KNQ
Sbjct: 10250 IYKKKKKVTPSPQKNQ 10265


>AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-PA
           protein.
          Length = 1506

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 478 KKRKHHCILKENSSYPEXXXXXXXXXPKNQASTRPFPVNPSRASIAYHRNAETS 639
           ++R  +C  +++ SY           P +  S  P P NP+ +S  Y   + T+
Sbjct: 464 RRRFPNCFRRQSQSYRTAYVPTSFSPPPSYPSALPVPANPTASSPVYSPTSSTA 517


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 240   KTKEILSLSRTSPRHTTSTVS*KKTQPL-YPERRLNHRILKEDSTTVSTYYIH*IKEEKS 416
             +T+E   + +  P+ ++      + +P+ + E      I +E  T+VS   +    +EK 
Sbjct: 12039 RTQEEEVVKKKKPKKSSKPEEGLQFEPIEFEEMERTSDIREESDTSVS---VDTSTQEKP 12095

Query: 417   LYPERRKITVS*RKNQ 464
             +Y +++K+T S +KNQ
Sbjct: 12096 IYKKKKKVTPSPQKNQ 12111


>BT011350-1|AAR96142.1|  489|Drosophila melanogaster RH05790p
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +3

Query: 219 AHRRILKKTKEILSLSRTSPRHTTSTVS*KKTQPLYPERRLNHRILKEDSTTVSTYYIH 395
           AH+R    + ++  L+ T P H +      K Q LYP R   H  L     T+     H
Sbjct: 264 AHQRNRMMSSQLTQLA-TPPAHASHLQQLNKLQQLYPPRSFGHPALPIAGVTLMPQLCH 321


>AY119154-1|AAM51014.1|  380|Drosophila melanogaster RE65163p
           protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +3

Query: 219 AHRRILKKTKEILSLSRTSPRHTTSTVS*KKTQPLYPERRLNHRILKEDSTTVSTYYIH 395
           AH+R    + ++  L+ T P H +      K Q LYP R   H  L     T+     H
Sbjct: 155 AHQRNRMMSSQLTQLA-TPPAHASHLQQLNKLQQLYPPRSFGHPALPIAGVTLMPQLCH 212


>AE014134-2891|AAN11175.1|  475|Drosophila melanogaster CG5674-PC,
           isoform C protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +3

Query: 219 AHRRILKKTKEILSLSRTSPRHTTSTVS*KKTQPLYPERRLNHRILKEDSTTVSTYYIH 395
           AH+R    + ++  L+ T P H +      K Q LYP R   H  L     T+     H
Sbjct: 250 AHQRNRMMSSQLTQLA-TPPAHASHLQQLNKLQQLYPPRSFGHPALPIAGVTLMPQLCH 307


>AE014134-2886|AAN11174.1|  489|Drosophila melanogaster CG5674-PA,
           isoform A protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +3

Query: 219 AHRRILKKTKEILSLSRTSPRHTTSTVS*KKTQPLYPERRLNHRILKEDSTTVSTYYIH 395
           AH+R    + ++  L+ T P H +      K Q LYP R   H  L     T+     H
Sbjct: 264 AHQRNRMMSSQLTQLA-TPPAHASHLQQLNKLQQLYPPRSFGHPALPIAGVTLMPQLCH 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,103,727
Number of Sequences: 53049
Number of extensions: 608986
Number of successful extensions: 1420
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)