Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060603.seq
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 177 5e-45
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 53 2e-07
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 1e-04
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 41 0.001
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 40 0.002
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.071
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.16
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 31 0.66
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.66
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.66
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.87
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.87
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 31 1.1
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 2.0
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092) 29 3.5
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 3.5
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 28 6.1
SB_43565| Best HMM Match : EGF (HMM E-Value=2.8e-05) 28 6.1
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 6.1
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72) 28 8.1
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0) 28 8.1
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 28 8.1
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 177 bits (432), Expect = 5e-45
Identities = 83/124 (66%), Positives = 99/124 (79%)
Frame = +2
Query: 257 VLSCGLSHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSM 436
+LSCGL+HTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPT IGYSM
Sbjct: 63 ILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSM 122
Query: 437 QGLCKFGFYEVFKVAYAGMLDDETPTLTVPSCTWRRLXRAEFIADIALSPMEAAKVRIQT 616
QGL KFGFYEVFK+ Y ML +E L S AEF ADIAL+PMEA KVRIQT
Sbjct: 123 QGLGKFGFYEVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADIALAPMEAVKVRIQT 182
Query: 617 MPGF 628
PG+
Sbjct: 183 QPGW 186
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 66 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 245
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 246 GVG 254
G G
Sbjct: 59 GFG 61
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 293 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFYEV 469
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 470 FKVAYAGMLDDETPT 514
K A+ D + PT
Sbjct: 69 CKKAFGEFYDGKKPT 83
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 269 GLSHTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQG 442
G+S TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 443 LCKFGFYEVFK 475
KF YE K
Sbjct: 208 GIKFFAYEKAK 218
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 275 SHTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCK 451
S T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 452 FGFYEVFKVAY 484
YE K Y
Sbjct: 304 LAVYETLKNFY 314
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 263 SCGLSHTAVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTXI 424
+CG A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP +
Sbjct: 339 TCG--QLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +2
Query: 272 LSHTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQ 439
++ + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + +
Sbjct: 694 VAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPT 753
Query: 440 GLCKFGFYEVFKVA-YAGM 493
+F YEV K A YA M
Sbjct: 754 IGIQFAVYEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQG 442
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 443 LCK 451
K
Sbjct: 989 AIK 991
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 230 IFRSLRSWCVLSCGLSHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 409
I S+ S C S ++ T P D++K R+ + Y+ V F ++V EG+ L KGW
Sbjct: 301 IVHSMSSVC--SGLVAATISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGW 358
Query: 410 APT 418
PT
Sbjct: 359 LPT 361
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 415
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFYE 466
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 467 VFK 475
+ +
Sbjct: 94 LVR 96
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 260 LSCGLSHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTXI 424
L+ +S TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 170 LAGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 272 LSHTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGL 445
+S T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106
Query: 446 CKFGFYEVFKVAYA 487
+F YE +K A
Sbjct: 107 VQFAAYEEYKKGIA 120
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +2
Query: 260 LSCGLSHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTX 421
L+ S T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G +
Sbjct: 115 LAGATSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINY 174
Query: 422 IGYSMQGLCKFGFYEVFK 475
+ Q F YEV K
Sbjct: 175 LRVCPQVAVMFAVYEVVK 192
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 272 LSHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTXIGYS 433
+S T PLD+V+ R+Q+ D KY +N +++G+ RGL +G + +
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 434 MQGLCKFGFYEVFK 475
Q FG YEV K
Sbjct: 245 PQVAIMFGVYEVTK 258
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 293 PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTXIGYSMQGLCKFGF 460
PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + ++ GF
Sbjct: 84 PLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--TIVPAMGIGF 141
Query: 461 YEVFKVAYAGMLD 499
Y +F+ A L+
Sbjct: 142 Y-MFETMKAYFLE 153
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 260 LSCGLSHTAVVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKG 406
LS +S ++P D++K R+QV ++Y V + F+ ++EEG GL KG
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
Query: 407 WAPTXI 424
AP+ +
Sbjct: 98 LAPSTL 103
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 314 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFYEV 469
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.7 bits (76), Expect = 0.071
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 18/127 (14%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTXIG 427
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 428 YSMQGLCKFGFYEVFKVAYAGMLDDETPTLTVPSCTWRRL---XRAEFIADIALSPMEAA 598
++ + G YE K G D + L W+++ + I +P +
Sbjct: 86 QAIYSSTRLGAYEPIK-NLLGATDSTSAAL------WKKIVAGVSSGVIGSAIATPTDLV 138
Query: 599 KVRIQTM 619
K+R Q +
Sbjct: 139 KIRFQAV 145
Score = 33.1 bits (72), Expect = 0.22
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Frame = +2
Query: 260 LSCGLSHTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXI 424
+S G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPTVK 181
Query: 425 GYSMQGLCKFGFYEVFK-VAYAGMLDDETPTLTVPSCTWRRLXRAEFIADIALSPMEAAK 601
+ + Y+ K + L E L + S A F+A SP++ +
Sbjct: 182 RAACISGTQIPTYDHTKHLLLNAELMREGVALHLASA-----LVAGFVATCVASPVDIVR 236
Query: 602 VRIQTMP 622
R T P
Sbjct: 237 TRFMTQP 243
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +2
Query: 260 LSCGLSHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAP 415
L G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P
Sbjct: 219 LVAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFP 278
Query: 416 TXIGYSMQGLCKFGFYEVFKVAYAGM 493
+ + F YE + YAG+
Sbjct: 279 NWTRTGLDTIIIFFVYERLR-RYAGL 303
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 230 IFRSLRSWCVLSCGLSHTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGL 397
+ RSL + + S + PLD VKC LQ++ Y V+ + RE GVRG+
Sbjct: 137 LLRSLAAGMIAGVATSFV-LTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGV 195
Query: 398 AKGWAPT 418
KG + T
Sbjct: 196 YKGISVT 202
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +2
Query: 272 LSHTAVVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSM 436
++ V P +++K RL V YK + + K +REEG+ L KG P+ +G
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLGL-- 222
Query: 437 QGLCKFGFYEVFKVAYAGMLDDETPTLTVPSCT 535
F F +AY +LD T T PS T
Sbjct: 223 -----FPFAGGSFLAYQ-ILDKVDSTRTEPSAT 249
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 260 LSCGLSHTAV-VPLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTXI 424
L CG + + P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 128 LFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 293 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 406
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTXIGYSMQGLCKF 454
PLD+V+ RL V +++ N G ++R EEG+RGL KG P+ + + +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQ 107
Query: 455 GFYEVFKV 478
Y++ K+
Sbjct: 108 SVYDIMKL 115
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 269 GLSHT-AVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTXIGY 430
GL+ T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P
Sbjct: 104 GLATTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRI 163
Query: 431 SMQGLCKFGFYE 466
+ F F E
Sbjct: 164 GPHTVLTFIFLE 175
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/94 (25%), Positives = 36/94 (38%)
Frame = +2
Query: 338 YKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFYEVFKVAYAGMLDDETPTL 517
Y NV N +EEGV L +G+ PT + + + Y K E +
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLSTKYFEDNIV 94
Query: 518 TVPSCTWRRLXRAEFIADIALSPMEAAKVRIQTM 619
C + + +A P++ AK RIQ M
Sbjct: 95 ----CHFGASMISGLATTVASMPVDIAKTRIQNM 124
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 257 VLSCGLSHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSM 436
+++ ++ P D+VK RLQ++ Y + + G+ GL +G P + ++
Sbjct: 531 IMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRRTL 590
Query: 437 QGLCKFGFYE 466
+ YE
Sbjct: 591 MSAMAWTIYE 600
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 272 LSHTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTXIGYSMQG 442
++HT PL +K RLQ++ + + FK+ + + EG+R +G + +G S +
Sbjct: 847 INHTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS-ET 904
Query: 443 LCKFGFYEVFK 475
+ F YE K
Sbjct: 905 VVHFTIYERLK 915
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.1 bits (67), Expect = 0.87
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +2
Query: 284 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTXIGYSMQGLCKFGF 460
A+ P++++K RLQ+ Y+ V++ +EEG+R + + + Q L F
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTL-HFTV 72
Query: 461 YEVFKVAYAGMLDDETPTLTVPSCTWRRLXRAEFIADIALSPMEAAKVRIQT 616
YE + A + + T + T A +A +P++ AK + T
Sbjct: 73 YEYARKALNPLGGYDPKTHVIAGAT------AGAVASAITTPLDVAKTLLNT 118
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 253 PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 113
P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 816 PPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +2
Query: 194 GTHGVL*IWIA*IFRSLRSWCVLSCG-----LSHTAVVPLDLVKCRLQVDAE----KYKN 346
G + +L W + +F S L G +S + P D++K R+Q D +YK
Sbjct: 114 GVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKFRYKG 173
Query: 347 VVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGL 445
+++ S +EEG+ +G PT + +Q L
Sbjct: 174 MMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +2
Query: 245 RSWCVLSCGLSHTAVV---PLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLA 400
R W ++ + A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 401 KGWAPTXI 424
KG P+ +
Sbjct: 482 KGVTPSFL 489
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 506 TPTLTVPSCTWRRLXRAEFIADIALSPMEAAKVRIQTMPGFR 631
TP T+ C+W L F A + +K R+ TM G+R
Sbjct: 495 TPANTIDICSWFGLINQVFYAFATATLQRTSKTRLATMCGYR 536
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFY--- 463
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFYGQC 88
Query: 464 -EVFKVAYAGMLDDETPTLTVPSCTWRRLXRAEFIADIALSPMEAAKVRIQTMPGFREXP 640
+ K G + T+ +C A F L P E K R+Q
Sbjct: 89 LSLIK-TLTGKKHESELTIFHNACAG---SGAAFFMSFVLCPAELIKCRLQAQHQ-TNLI 143
Query: 641 XAKRGPKDG 667
GPK G
Sbjct: 144 SGMAGPKSG 152
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTXI 424
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 220 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 59
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 134 PVDGRARGYRADRWHGGVCCG 196
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092)
Length = 267
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 413 PTXIGYSMQGLCKFGFYEVFK-VAYAGMLDDETPTLTV 523
P+ +GYS++ C FGF K V+ + ++DD T + T+
Sbjct: 29 PSPVGYSIRVSCSFGFIVTLKNVSGSLVIDDMTSSETL 66
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGL 445
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 446 CKFGFYEV 469
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 395 LAKGWAPTXIGYSMQGLCKFGFYEVFKV 478
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 132 CQSTVAPVAIEQTGGMAASAAVPTES 209
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 284 PCGRDRMTEHTNSA-KSEIFRRSKFTG 207
PC RDR+ E T++ KS++ + FTG
Sbjct: 203 PCSRDRVNEVTDTVLKSDLVSKMSFTG 229
>SB_43565| Best HMM Match : EGF (HMM E-Value=2.8e-05)
Length = 192
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 525 LRVPGGVCXGRNSSPTLPCRP 587
+R P GVC G+ S PT C P
Sbjct: 134 MRTPFGVCAGKLSKPTAICDP 154
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 314 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTXIGYSMQGLCKFGFYEV 469
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 302 GRGAPRPCGRDRMTEHTNSAKSEIFRRSKFTGLRGYRSRRRHAT 171
GRG R R R + H++S+ S RS+ G RSR R ++
Sbjct: 684 GRGRKRSRRRSRSSSHSSSSLSRSRSRSRSRGRGRRRSRSRSSS 727
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 77 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 211
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72)
Length = 1161
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = -3
Query: 220 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEFRAASSNEENIIMF*LSLM 41
P S+ A C + A+ + AG GP E+ + NI++ L+
Sbjct: 768 PKKSGSLAREPSTAPSLFCDLVAAASAKMYLAGQGGPGKTEWAVSMFRGRNIVV--LTPE 825
Query: 40 LFTSHEHTAPPR 5
+H+H PR
Sbjct: 826 NDLAHDHRNNPR 837
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 480 PTPVCW-TTRPLHLPYLRVPGGVCXGRNSSPTLPCR-PWR 593
P PV TT + + Y P VC G PT+ R PWR
Sbjct: 919 PAPVPKSTTNAIFITYADTPTMVCFGMFRKPTINLRVPWR 958
>SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = -3
Query: 295 GHHGRVGETA*QNTPTPQRAKYLG--DPNSQDS---VGTAADAAMPPVCSIATGATVD-W 134
G H VG+T + TP K +G D S DS + A+ V + G +D W
Sbjct: 387 GFHEAVGDTLSLSVDTPTHLKLIGLLDAVSNDSKSDINALMKMALRKVAFLPFGFLIDQW 446
Query: 133 HWAGDSG 113
W SG
Sbjct: 447 RWKVFSG 453
>SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1737
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 310 LHQVEGHHGRVGETA*QNTPTPQRAKYLGDPNSQDSVGTAADAAMP 173
LH++ HH +GE + + +LG+ + Q + AD MP
Sbjct: 268 LHRLYPHHLMLGEEGQRVVEDTLKTFHLGEKSEQPQSSSVADVTMP 313
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 260 LSCGLSHTAVVPLDLVKCRLQVDAEKYKN--VVNGFKVSVREEGVRGLAK 403
LS + T PL+ +K Q + YKN V K ++EG++G K
Sbjct: 64 LSTCCAKTTTAPLERLKILFQAQNKHYKNMSVFGALKAIYKKEGLQGYYK 113
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,725,381
Number of Sequences: 59808
Number of extensions: 456742
Number of successful extensions: 1420
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -