Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060602.seq
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   1.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 503 SNNQN*LTIQQTVITLVLINNWLLHLSR 586
           S +Q     Q T +T++ +NNW ++  R
Sbjct: 363 SEDQKKQLAQDTGLTILQVNNWFINARR 390


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 348 SFPGLWMYIKYMYVYSKKT 292
           +F  +W+Y+  +YV S+K+
Sbjct: 7   TFLAIWLYLTAIYVSSRKS 25


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 446 GRLV*W*VT*SLHKGLAGSNPAK 378
           GR+  W +  +LHK L   NPAK
Sbjct: 233 GRVAVW-MCNNLHKALESRNPAK 254


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 446 GRLV*W*VT*SLHKGLAGSNPAK 378
           GR+  W +  +LHK L   NPAK
Sbjct: 233 GRVAVW-MCNNLHKALESRNPAK 254


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +2

Query: 362 HTNIFPWRDSNPRAPCVVIMSLTTTPDGRYILYYIIYSLFTFISAKNSNNQN*LTIQQTV 541
           H N+  W  ++        + ++   +  + L  I+YS+    SA  +     L +++  
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRR 82

Query: 542 ITLVLINNWLLHLS 583
            T   IN  L+HL+
Sbjct: 83  KTPSRINTMLMHLA 96


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +2

Query: 362 HTNIFPWRDSNPRAPCVVIMSLTTTPDGRYILYYIIYSLFTFISAKNSNNQN*LTIQQTV 541
           H N+  W  ++        + ++   +  + L  I+YS+    SA  +     L +++  
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRR 82

Query: 542 ITLVLINNWLLHLS 583
            T   IN  L+HL+
Sbjct: 83  KTPSRINTMLMHLA 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,114
Number of Sequences: 336
Number of extensions: 2674
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)