Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060602.seq
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   1.7  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   1.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   3.9  

>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 421 VTYHYTRRPLYIILYN 468
           VTYHY    +Y I+YN
Sbjct: 198 VTYHYFEEEIYQIIYN 213


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 421 VTYHYTRRPLYIILYN 468
           VTYHY    +Y I+YN
Sbjct: 198 VTYHYFEEEIYQIIYN 213


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
 Frame = +2

Query: 371 IFPWRDSNPRAPCVVIMSLTTTPDGRYILY--YIIYSLFTF-ISAKNSNN-----QN*LT 526
           +FP   +NPR   + +   T  PD   I Y   ++  L +  I  +N N      +N LT
Sbjct: 272 VFPSDKNNPRLALIFLGYTTPPPDSDGIKYSDSLLGQLLSLSIMPRNHNGPYEYYENPLT 331

Query: 527 IQQTVITLVLINNW---LLHLSRPH 592
             ++ +  +  N W     HL+R H
Sbjct: 332 TNRSAVDSLSSNLWNYTKRHLARMH 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,123
Number of Sequences: 2352
Number of extensions: 10089
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)