Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060601.seq
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   5.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 134 PQRLRNRHH 160
           PQRLR RHH
Sbjct: 21  PQRLRIRHH 29


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 431 PRXEPEPTSTCRSARTRSA 375
           P  EP+PT T  S  T+++
Sbjct: 397 PTPEPQPTQTTESEPTQAS 415


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 231  SATQVTKECWTQA*S*RWSVVLELVWTTSTST 326
            S+T+     WT   S  WS      W T+T+T
Sbjct: 1026 SSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTT 1057


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 92  GFDRRRGWRQVCRTPQRLRNRHHHQG 169
           G D++  W + CR  ++L  R +  G
Sbjct: 579 GLDQQNQWCKPCRPREQLTWRRNFHG 604


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 92  GFDRRRGWRQVCRTPQRLRNRHHHQG 169
           G D++  W + CR  ++L  R +  G
Sbjct: 471 GLDQQNQWCKPCRPREQLTWRRNFHG 496


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 192 LMEIPNHXALVVRSATQVTKECWTQ 266
           L+E+ +   L      +V  ECW Q
Sbjct: 387 LLELSDETELFHLGGDEVNLECWAQ 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,735
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)