Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060601.seq
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 83 2e-16
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 82 5e-16
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 73 3e-13
04_01_0037 + 444239-444667,444817-444825 46 2e-05
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 46 3e-05
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 45 6e-05
04_01_0038 + 446314-446787,446829-447350 44 1e-04
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 41 8e-04
04_01_0035 - 433848-434372,434905-435381 40 0.002
04_01_0036 + 436592-437572 34 0.12
02_01_0012 - 80014-80104,80190-80308,80480-80524,80726-80911,810... 33 0.16
09_02_0252 - 6315834-6315959,6316074-6317018 33 0.21
02_05_0814 - 31970558-31971126,31971242-31971413 33 0.28
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 32 0.37
02_01_0575 - 4264136-4264200,4264589-4264652,4264760-4264879,426... 32 0.49
01_01_0038 + 288522-288572,289395-289512,289790-289809,290077-29... 32 0.49
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 31 0.64
09_02_0082 - 4060018-4061604 31 0.85
04_01_0033 + 391565-391974,393484-393520,394959-395483 31 0.85
02_04_0129 + 20020388-20021215 31 1.1
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 30 1.5
08_01_1016 - 10280918-10281171,10281319-10281460 30 2.0
07_03_1011 + 23292086-23292149,23292407-23293663,23294312-232943... 30 2.0
10_01_0320 + 3506183-3507109 29 3.4
10_06_0169 + 11420115-11420163,11420922-11421041,11421938-114220... 29 4.5
05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975 29 4.5
03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160 29 4.5
09_04_0441 + 17626285-17626620,17626726-17626812,17627195-176272... 28 6.0
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 6.0
05_05_0091 + 22319411-22320901 28 6.0
02_02_0282 - 8540726-8541106 28 6.0
01_04_0062 - 15563978-15564616,15564687-15565604 28 6.0
01_01_1148 - 9113728-9113835,9113952-9114035,9114831-9114992,911... 28 6.0
07_01_0466 - 3518315-3521428 28 7.9
04_04_1125 + 31085106-31085714 28 7.9
03_02_0039 - 5213699-5214775,5214815-5215093,5215300-5215776,521... 28 7.9
03_01_0643 - 4708245-4708355,4708456-4708800,4709124-4709700,470... 28 7.9
01_01_0218 + 1856104-1856700,1856814-1857452 28 7.9
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +2
Query: 272 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTAL 451
+L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR V A +L
Sbjct: 134 RLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHAIALLAAMARNVAQADASL 193
Query: 452 KAGRWDRALYTGSELAGKT 508
KAG+W R Y G L GKT
Sbjct: 194 KAGKWQRNKYVGVSLVGKT 212
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 90 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHXALVVRSATQVTKECWTQA 269
+VL+ + +G ELL + +++ EEL ++ ALVVRSAT+VT+E + A
Sbjct: 73 TVLVTEKLGDAGLELLRRFANVDCAY-ELTAEELRAKVSLVDALVVRSATRVTREVFEAA 131
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 81.8 bits (193), Expect = 5e-16
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +2
Query: 263 AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPAT 442
+G +L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ ++R + A
Sbjct: 131 SGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSRNIAQAD 190
Query: 443 TALKAGRWDRALYTGSELAGKT 508
+LKAG+W R Y G L GKT
Sbjct: 191 ASLKAGKWQRNKYVGVSLVGKT 212
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 90 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHXALVVRSATQVTKE 254
+VL+ + +GA ELL + + +S EEL +IP AL+VRS T+V ++
Sbjct: 73 TVLVAEKLGAAGLELLRGFANVDCSYG-LSPEELRAKIPLCDALIVRSGTKVGRD 126
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Frame = +2
Query: 248 QRVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 424
+ VL+AG +L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR
Sbjct: 131 REVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHGIALLASMAR 190
Query: 425 XVVPATTALKA------------GRWDRALYTGSELAGKT 508
V A ALKA G+W R Y G L GKT
Sbjct: 191 NVSQADAALKAVYSRTLTVFTAQGKWQRTKYVGVSLVGKT 230
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 174 ISKEELLMEIPNHXALVVRSATQVTKE 254
+S ELL ++ AL+VRS T+VT+E
Sbjct: 106 MSPAELLAKVAQFDALIVRSGTKVTRE 132
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 272 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTAL 451
KL++V GVD+ID+D+ ++G+ V NA A + L++ + R V A L
Sbjct: 68 KLEIVVATSTGVDHIDLDACRRRGISVTNAGEVFAPDVADYAVGLVVAVLRRVAAAEAYL 127
Query: 452 KAGRW 466
+ GRW
Sbjct: 128 RRGRW 132
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 245 DQRVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 424
D ++DA L++V G+D +D+D+ ++GV V N P +L L + R
Sbjct: 60 DAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDDVADLAVGLAIAALR 119
Query: 425 XVVPATTALKAGRW 466
+ A ++AG+W
Sbjct: 120 KIPQADRYVRAGKW 133
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTALK 454
L+++ AG G D+ID+ +A G+ V G+N +S E +L+L R +P +
Sbjct: 133 LELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVV 192
Query: 455 AGRWDRA--LYTGSELAGKT 508
G W+ A Y +L GKT
Sbjct: 193 HGEWNVAGIAYRAYDLEGKT 212
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 257 LDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVP 436
+DA L++V + AGVD+I++ + ++G+ V NA A + A + L++ + R V
Sbjct: 66 IDALPALELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAADYAVGLLVAVLRRVAA 125
Query: 437 ATTALKAGRWDRA 475
A ++ G W A
Sbjct: 126 ADAYVRRGAWAAA 138
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTALK 454
L+++ AG G D+ID+ +A G+ V G+N +S E +L+L R +P +
Sbjct: 114 LELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIV 173
Query: 455 AGRWDRA--LYTGSELAGKT 508
G W+ A + +L GKT
Sbjct: 174 NGEWNVAGIAHRTYDLEGKT 193
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 LDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVP 436
LDA L V GAGVD+ID+ ++GV V A + + L++ + R +
Sbjct: 79 LDAVPSLGCVVTTGAGVDHIDLAECARRGVAVAGAGTVFSTDVADHAVGLLVDVLRRISA 138
Query: 437 ATTALKAGRW-DRALY-TGSELAGK 505
+ ++ G W R Y GS+L+GK
Sbjct: 139 SDRYVRRGLWAARGDYPLGSKLSGK 163
>04_01_0036 + 436592-437572
Length = 326
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 254 VLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVV 433
+LDA L+ + AG ++ID+ ++GV V NA G + + L+L + R V
Sbjct: 67 LLDAVPSLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLLDVLRHVS 126
Query: 434 PATTALKAG 460
++ G
Sbjct: 127 AGDRFVRRG 135
>02_01_0012 -
80014-80104,80190-80308,80480-80524,80726-80911,
81027-81101,81213-81304,81731-81803,81923-82004,
82096-82217,82249-82440,82682-82804
Length = 399
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 20/89 (22%)
Frame = +2
Query: 302 GVDNIDVDSAGKKGVGVINAPGANAL-----------------SACELTCTLMLVLARXV 430
G +N+DV++A + G+ V N P ++A + EL +L L AR +
Sbjct: 68 GYNNVDVEAANRNGIAVGNTPVSSAALCFLISRLSYWMGVLTETTAELAASLSLAAARRI 127
Query: 431 VPATTALKAGRWD---RALYTGSELAGKT 508
V A ++AG +D L+ G+ L G+T
Sbjct: 128 VEADQFMRAGLYDGWLPHLFVGNLLKGQT 156
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = -1
Query: 459 PAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 280
P + + TT R R +VSS LS+ PG P P P STS TP+P
Sbjct: 12 PPLAIPLPETTRRPRRRTR-EVSSRYLSSTTPG----PVPSSPRLSTSSSRTPSPRAHRP 66
Query: 279 FSFTPASN 256
+ TP +N
Sbjct: 67 RAATPFAN 74
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTP 265
TPTP P ST M +TP P+ P T TP
Sbjct: 159 TPTPTTPYPSTPMPTTPYPSTPMTTPTTP 187
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 245 DQRVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGA---NALSACELTCTLMLV 415
D ++ ++KV+ + G G++ +DV++A + + V G+ NA+S E+ L L
Sbjct: 52 DSDIIAKASQMKVIMQYGVGIEGVDVNAATEHKIKVARINGSTTGNAVSCAEMAIYLTLG 111
Query: 416 LARXVV 433
+ R V
Sbjct: 112 ILRKQV 117
>02_01_0575 -
4264136-4264200,4264589-4264652,4264760-4264879,
4264906-4265002,4265365-4265437,4265534-4265630,
4265736-4266007,4266114-4266240,4266902-4267139,
4267508-4267620,4267722-4267762,4268569-4268788
Length = 508
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 610 ADTKGSKSDDVSCRKAYILXSTSRPDPAKAQGWRGLASELAASVQSPVPPASLQRSG-SW 434
A+ G + C +L + PD + +S +S QSP PP + SG +
Sbjct: 17 AERPGGWFSGLVCGAGRLLAAVLGPDSPDSGTGGSASSSQESSSQSPPPPRGHRGSGDNT 76
Query: 433 DHVASQNQHQRAGQ 392
H AS NQ ++G+
Sbjct: 77 AHFASNNQFNQSGK 90
>01_01_0038 +
288522-288572,289395-289512,289790-289809,290077-290109,
290648-290779,290859-290948,291402-291527
Length = 189
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 47 TTIALPNQDGRGH*VGFDRRRGWRQVCRTPQRLRNRHHHQGQDLQGRTSYGDTQPRXSGC 226
T + +P++ + +R R RQV + + L+ + + L+ + GD QP
Sbjct: 94 TELRIPDRASSSEIIIMERNRKIRQVEKEMEELKKQRDNAQSKLELQKKMGDNQPAARRL 153
Query: 227 AFSNSSDQRVLDAGVKLKV 283
+ S QR + G K K+
Sbjct: 154 REALSGAQRTISRGPKAKL 172
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 431 VPATTALKAGRWDRALYTGSELAGK 505
VP TTAL +WD+ YTGS G+
Sbjct: 184 VPETTALLEQKWDKIFYTGSGNVGR 208
>09_02_0082 - 4060018-4061604
Length = 528
Score = 31.1 bits (67), Expect = 0.85
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -1
Query: 459 PAFSAVVAGTTXRARTNINVQVSSHAL--SALAPGALITPTPFLPAES---TSMLSTPAP 295
P F+ V+ TT R SS A+ +A AP AL TP P L + +L+ PAP
Sbjct: 283 PGFT--VSPTTTRYSFGYGGASSSSAMPHAATAPLALRTPAPHLRVSRKPRSLVLTPPAP 340
Query: 294 ARPTTFSFTPAS 259
A P TPA+
Sbjct: 341 APPVATPPTPAT 352
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 242 SDQRVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINA 361
+D + DA L+ V AGVD+ID+ ++GV V N+
Sbjct: 70 ADAALFDAVPSLRCVVSTAAGVDHIDLAECARRGVVVANS 109
>02_04_0129 + 20020388-20021215
Length = 275
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 369 APGALITPTPFLPAESTSMLSTPAPARPTTFS 274
A A P PF P+ + +LSTP P TFS
Sbjct: 232 AGAAAAPPPPFAPSPRSLLLSTPTMPSPATFS 263
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Frame = +2
Query: 128 RTPQRLRNRHHHQGQDLQGRTSYGDTQPR-----XSGCAFSNSSDQRVLDAGVKLKVVGR 292
+ PQ + HHHQ Q + +G P +G +F + R DA K G
Sbjct: 318 KQPQHMDEHHHHQQQPMAAPQQHGGEAPEGDLKWPNGLSFFTALTGRTEDA--KFLFGGG 375
Query: 293 AGAGVDNIDVDSAGKKGVG 349
G G D+ +A + G
Sbjct: 376 GGGGADDGSKTAAAAQDAG 394
>08_01_1016 - 10280918-10281171,10281319-10281460
Length = 131
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Frame = +2
Query: 152 RHHHQGQDLQGRTSYGDTQPRXSGCAFSNSSDQRVLDAGVKLKVVGRAGAGVDNIDVDSA 331
R H ++L G+ PR G + G AGAG +
Sbjct: 38 RPHLHVEELHGKKLMEIQVPRKLGHEVKVPKRMAIAHKGGSAGAAAAAGAGGGGVSESRP 97
Query: 332 --GKKGVGVINAPGANALSACELTCTLML 412
GK G + AP ++ A +TC +L
Sbjct: 98 RNGKNGAATLPAPATTSILALAITCAAVL 126
>07_03_1011 +
23292086-23292149,23292407-23293663,23294312-23294316,
23294566-23294593,23294664-23294724,23295205-23295259
Length = 489
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -1
Query: 378 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTLWSLELLN 229
SAL L T ST M+S P P TF+ T +S L L+ LN
Sbjct: 139 SALLAANLNTQVKISSPHSTDMISKPFPPSTATFNSTWSSIMLQYLQFLN 188
>10_01_0320 + 3506183-3507109
Length = 308
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 493 LAASVQSPVPPASLQRSGSWDH--VASQNQHQRAGQLA-RAQRIGARSVDHSDAL 338
+AA +P PPAS +R+ + DH AS++ A A R +R SVD + L
Sbjct: 1 MAAPAPAPAPPASRKRAAAPDHEPTASRSSTPAAAAGAKRPRRYALASVDDYEQL 55
>10_06_0169 +
11420115-11420163,11420922-11421041,11421938-11422053,
11422125-11422213,11422413-11422455,11423296-11423440,
11423581-11423688,11423767-11424086,11424255-11424671,
11424776-11425470,11425564-11426107,11426338-11426682,
11426799-11426909
Length = 1033
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -1
Query: 384 ALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTLWSLELLN 229
AL A APGAL P P PAEST A F S+ L+ LN
Sbjct: 710 ALGA-APGALTDPHPNYPAESTPADLASANGHKGISGFLAESSLTSHLQALN 760
>05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975
Length = 362
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 423 RARTNINVQVSSHALSALAPGALITPTPFLPAESTSML--STPAPARPTTFSFTPASNTL 250
RA +I++ S SA + GA + P+P PA+ + S RP + S++ +S+T+
Sbjct: 135 RALVHISIDCSGPT-SARSVGAAVMPSPVAPAKDVKAVIRSKARGGRPRSPSYSCSSSTV 193
Query: 249 WSLEL 235
EL
Sbjct: 194 TDDEL 198
>03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160
Length = 200
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 384 ALSALAPGALITPTPFLPAESTSMLSTP--APARPTTFSFTPAS 259
A +AL PGA P PA + P +PA PTT TPA+
Sbjct: 105 ARAALLPGACSVQAP--PASQCNAAGVPVSSPANPTTSGGTPAT 146
>09_04_0441 +
17626285-17626620,17626726-17626812,17627195-17627293,
17627431-17627632,17627735-17627832,17628050-17628298
Length = 356
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -1
Query: 480 YRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTP 301
+R A +A V G A +++N + SH + LI P P P S +S+
Sbjct: 248 FRPSEIAAAVAAAVVGEEHAAFSHVNKERMSHCQEVIQAMELIHPKPSSP--SRVFVSSS 305
Query: 300 APARPT 283
P PT
Sbjct: 306 IPRSPT 311
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 381 LSALAPGALITPTPFLPAESTSMLSTPAPA 292
++A+AP +L TP LP+ S ++ P PA
Sbjct: 1 MAAVAPPSLSTPVTILPSVSVALPPLPPPA 30
>05_05_0091 + 22319411-22320901
Length = 496
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 379 ERVRADLHVDVGSGSXRGPSYHCAEGWQVGPGSVHWQR 492
+R L +++ S S HC + WQ P V W++
Sbjct: 283 QRRDVPLRIEMSSNSCPIIRSHCQQPWQTSPPGVDWRK 320
>02_02_0282 - 8540726-8541106
Length = 126
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 541 RPDPAKAQGWRGLASELAASV-QSPVPP 461
RP P +A GWRG A V + VPP
Sbjct: 53 RPRPCRADGWRGAGGASATVVKREAVPP 80
>01_04_0062 - 15563978-15564616,15564687-15565604
Length = 518
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 344 VGVINAPGANALSACELTCTLMLVLARXV--VPATTALKAGRWDRALYTGSELAGKTSP 514
VGV+ AP + CTL L+ AR V A + GR RA+ + +A T+P
Sbjct: 119 VGVVFAPYGDGWRTLRRICTLELLSARRVRSFRAVREEEVGRLLRAVAAAAAVAALTTP 177
>01_01_1148 -
9113728-9113835,9113952-9114035,9114831-9114992,
9115120-9115224,9115584-9116216,9117412-9117496,
9118426-9118520,9119083-9119241,9119968-9119997,
9120100-9120306
Length = 555
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 529 AKAQGW--RGLASELAAS-VQSPVPPASLQRSGSWDHVASQN 413
A A W RGLAS + S + S P SLQ++ SWD + N
Sbjct: 17 AAAARWASRGLASVGSGSDIVSAAPGVSLQKARSWDEGVATN 58
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Frame = -1
Query: 519 KDGEVLPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGA------ 358
K E LPA+S A P A A T V ++S A++A A A
Sbjct: 180 KAEEALPAASGGDDGATDKPPETDAAAAAATSAPEEEAPV-MASEAVAASAEAAPEEEQI 238
Query: 357 LITPTPFLPAESTSMLSTPAPARP 286
L P P P + + P PARP
Sbjct: 239 LTPPPPPTPTPTPMLRQVPVPARP 262
>04_04_1125 + 31085106-31085714
Length = 202
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 253
TP P P T TP PA P TPA+ T
Sbjct: 64 TPPPATPTPPTPTPWTPTPATPPPTPATPATPT 96
>03_02_0039 -
5213699-5214775,5214815-5215093,5215300-5215776,
5216073-5216438
Length = 732
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 557 PXVHLAARPCQGPRMARSCQRARCQCTEPGPTCQPSAQW 441
P +A C+G R R+R +C++ PT Q W
Sbjct: 140 PSPRQSAAFCRGTSEWRMASRSRSECSQSSPTIQRRHAW 178
>03_01_0643 -
4708245-4708355,4708456-4708800,4709124-4709700,
4709780-4710462,4710618-4710980,4712199-4712530,
4712856-4713048,4713748-4713790,4713964-4714052,
4714186-4714301,4714816-4714935,4715538-4715577
Length = 1003
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -1
Query: 384 ALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTLWSLELLNAQPEXR 211
AL A APGA+ PTP P+ ST A F S+ L+ LN + R
Sbjct: 669 ALGA-APGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQTLNLKEAMR 725
>01_01_0218 + 1856104-1856700,1856814-1857452
Length = 411
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 384 ALSALAPGALITPTPFLPAES--TSMLSTPAPARPTTFSFTPASNT 253
++S+LAP + PTP P+ S T + P+P PT S + S T
Sbjct: 50 SVSSLAPSSTPMPTPTAPSPSPETPCVWPPSPPSPTDPSASMPSPT 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,262,309
Number of Sequences: 37544
Number of extensions: 427528
Number of successful extensions: 2140
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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