Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060601.seq
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12) 46 4e-05
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052) 41 0.001
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 32 0.38
SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1) 32 0.50
SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08) 31 1.1
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 30 1.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_1411| Best HMM Match : PT (HMM E-Value=0.079) 29 2.7
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 4.6
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 28 6.1
SB_10207| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_21917| Best HMM Match : CXC (HMM E-Value=0.22) 28 6.1
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 6.1
SB_13345| Best HMM Match : Hormone_4 (HMM E-Value=3.9) 28 6.1
SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 28 6.1
SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1) 28 8.1
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 8.1
SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7) 28 8.1
>SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +2
Query: 275 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTALK 454
LKV+ GAG+DNID+++A ++G+ V N PG + A + L++ AR V+ A ++
Sbjct: 73 LKVISNIGAGIDNIDLEAAKRRGILVGNTPGISDCLA-DFAWALLMAAARNVIQADAMMR 131
>SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12)
Length = 189
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 VLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVV 433
+LD LKV+ GAG D ID+ +A K+G+ V N PG ++ L+L AR +V
Sbjct: 62 LLDDLPSLKVISSIGAGFDRIDIPAATKRGIRVGNTPGVVQDCTADMAIGLLLASARHIV 121
Query: 434 PA-TTALKAGRWDRALYT--GSELAGKT 508
K G +++ G+ + G T
Sbjct: 122 TGDANTRKPGFTKESIFNCFGTRVTGST 149
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +2
Query: 245 DQRVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 424
D ++D +L+V+ AG GVD+ID+ +A +G+ V N PG + L+L AR
Sbjct: 60 DSALMDCYPELRVISSAGVGVDHIDLAAATIRGIRVGNTPGVVQECTADHAIGLLLASAR 119
Query: 425 XVVPATTALK 454
+ + ++
Sbjct: 120 KICSGDSVIR 129
>SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052)
Length = 126
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 254 VLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVI 355
V+ AG LK++GRAG GVDNID +A GV V+
Sbjct: 92 VIKAGKNLKIIGRAGTGVDNIDTVAASLHGVLVM 125
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 78 VDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIP 206
+++K VLI D V + C +L G+ K+SKEEL+ EIP
Sbjct: 4 LELKRVLISDSVDSCCKTILERNGVTVDVNTKLSKEELVSEIP 46
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTL 250
TP+P P ++T +TP P PT + TP ++TL
Sbjct: 58 TPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTL 91
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTLWSLELLNAQP 220
TPTP P+ + +TP PA PT + TP + T + L P
Sbjct: 53 TPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTP 96
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 253
TPT P ++T +TP+P PT + TPA+ T
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPT 75
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPA-RPTTFSFTPASNT 253
TPTP P +TS L+ P PA PT TP ++T
Sbjct: 78 TPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHT 111
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPARPTTFSFTPAS 259
TPTP P +T TP P T TPA+
Sbjct: 68 TPTPATPTPTTPTPKTPTPTTSTLTKPTPAT 98
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -1
Query: 444 VVAGTTXRARTNINVQVSSHALSAL-APGALITPTPFLPAES--TSMLSTPAPARPTTFS 274
V A T+ + VQ +++ +S + AP A + PT PA++ T STPA + T
Sbjct: 689 VFANTSQSNKAADKVQSATNVVSVMSAPPAYVPPTSAPPAQTQVTDTYSTPAQTQVTDTY 748
Query: 273 FTPASNT 253
TPA T
Sbjct: 749 STPAQTT 755
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -1
Query: 513 GEVLPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFL 334
G + P RA L A +A AGT +R++ +V ++S + + +TP F
Sbjct: 559 GRITTKKKTPPRRANL-LEALTAAAAGTPAASRSSSSVSLASPGMRSSLGSLQLTPPSFT 617
Query: 333 PAESTSMLSTPAPAR 289
P S S + P +
Sbjct: 618 PRSSISRRRSDTPTK 632
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 393 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 280
SS +++ +L TP+ P+ ST LSTP P++P+T
Sbjct: 196 SSSSITTTKLSSLSTPSLSTPSLSTPSLSTPLPSKPST 233
>SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1)
Length = 186
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 122 VCRTPQRLRNRHHHQGQDLQGRTSYGDTQPR 214
+CR+ + RHHH L G +SYG P+
Sbjct: 113 LCRSKRPYGLRHHHHASGLMGASSYGMAMPK 143
>SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08)
Length = 573
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -3
Query: 571 RKAYILXSTSRPDPAKAQGWRGLASELAASVQSPVPPASLQRSGSWDHVASQNQHQR 401
RKA + + S P P K++ + +E+A SV PV A G + H + NQ+Q+
Sbjct: 93 RKASEIRTGSNPSPTKSRIIKDDLNEIAPSVVKPVADA----RGIFSHSITSNQYQK 145
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 450 SAVVAGTTXRARTNINVQVSSHALSALAPGALITP-TPFLPAESTSMLSTPAPARPTTFS 274
+ V TT + + ++ ++ ++ +AP P TP +P + ++ ST AP
Sbjct: 510 TTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDTPIVPETTVALESTVAPEITVVPE 569
Query: 273 FTPASNTLWSLELLNA 226
TPA T + E +A
Sbjct: 570 TTPALETTSASESTDA 585
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 450 SAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFS- 274
+ +V GTT T + ++ + +++ +AP + + P + +EST T A TTF+
Sbjct: 1695 TTMVPGTTLEPETTMALESTVASVTTMAPESTLAPEITIASESTVAPGT-TMAPETTFAP 1753
Query: 273 -FTPASNTLWSLELLNAQPE 217
T A T +LE A PE
Sbjct: 1754 ETTKAPETTLALETTTA-PE 1772
>SB_1411| Best HMM Match : PT (HMM E-Value=0.079)
Length = 131
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -2
Query: 578 FMPKGVHPXVHLAARPCQGPRMARSCQRARCQCTEP--GPTCQPS 450
F P GV P H + P PR+ CQ + +P GP C PS
Sbjct: 44 FQP-GVGPICHPSVDPIFQPRVGPICQPSEDPIFQPGVGPICHPS 87
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/100 (23%), Positives = 40/100 (40%)
Frame = -1
Query: 516 DGEVLPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPF 337
D V P S++ A S + + + + GTT ++T + + ++ + +AP P
Sbjct: 3194 DSTVAPESTVA---ADSTVASETIIAQGTTLASKTTVATETTASPETTVAPVTTAAPETT 3250
Query: 336 LPAESTSMLSTPAPARPTTFSFTPASNTLWSLELLNAQPE 217
+ EST T A T T + + A PE
Sbjct: 3251 VAPESTLAPETTAAPETTLARETTVAPETTAASETTAAPE 3290
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 342 PFLPAESTSMLSTPAPARPTTFSFTPASN 256
P P+ ++ TP PT F FTP +N
Sbjct: 444 PVTPSSGSTTRQTPNSIEPTRFHFTPITN 472
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 131 TPQRLRNRHHHQGQDLQG 184
TPQ+L HH++G D+QG
Sbjct: 254 TPQKLPFHHHNKGYDIQG 271
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 123 CAELLNAYGIATTTKAKISKEELLMEIPNHXALVV 227
C L N Y A+T++ K SKE+++ ++ +VV
Sbjct: 3040 CQTLNNTYSPASTSRVKASKEQIISANSSYAEIVV 3074
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 414 TNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFS--FTP 265
T ++V + + + + G L+TP P+LPA ++ T P+T+ +TP
Sbjct: 492 TCVDVNAALGLVVSGSQGKLLTPFPYLPAAEYTLPLTSRLIHPSTYKPLYTP 543
>SB_10207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 658 KCLPLXLGAMELAH*SADTKGSKSDDVSCRKAYILXSTSRPDPAKAQGWRGLASELAASV 479
+ + L +GA+ +A +T G+ S D C++ S D A WR L L S+
Sbjct: 692 RLMALAVGALHVAR-HVNTAGTASADARCQRECHFFSDQVVDTACQHKWRNLKEVLVPSL 750
>SB_21917| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 470
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 323 DSAGKKGVGVINAPGANALSACELTCTLML 412
D G+ GV V +APG C++ CT L
Sbjct: 235 DEMGRAGVTVEHAPGDADYKICQMACTYAL 264
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 574 CRKAYILXSTSRPDPAKAQGWRGLASELAASVQSPVPPASLQRSGSWDHVA-SQNQHQRA 398
C + Y S S +P + WR S+L ++ PVP QR W + S + +RA
Sbjct: 14 CGRLYGTTSISLHEPKCLEKWRMENSQLPRHLRRPVP----QRPQGWQMGSLSNDPRERA 69
Query: 397 GQL 389
QL
Sbjct: 70 NQL 72
>SB_13345| Best HMM Match : Hormone_4 (HMM E-Value=3.9)
Length = 448
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -1
Query: 513 GEVLPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFL 334
G +P S +PV R +H P + + G+ R ++ + + S A G T
Sbjct: 185 GNAMPTSCVPVKRCGTHAPGW---IVGSHPSLRYSLVTRKVCYHWSGSAAGGATTSKSGT 241
Query: 333 PAESTSMLSTPAPARPTTFSFTPA 262
A+ST ST P P+ T A
Sbjct: 242 VADST---STSYPRHPSVGFATAA 262
>SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 396 VSSHALSALAPGALITPTPFLPAESTSML 310
+S H L LA G PTP +PA + S+L
Sbjct: 163 LSPHELRLLAKGLKFIPTPPIPASNKSLL 191
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -1
Query: 438 AGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARP 286
AG + T + HA A AP + P P PA STS + TP+P P
Sbjct: 287 AGLSGCITTMAHTSPFLHAPIARAP--IARPLPTSPACSTSRIYTPSPLPP 335
>SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1)
Length = 114
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -1
Query: 393 SSHALSALAPG---ALITPTPFLP-AESTSMLSTPAPARPTT 280
S +A +A+A G A +TP+ P A STS + + A ARPTT
Sbjct: 22 SINATTAIATGTFSATVTPSKTSPVAMSTSAVFSTAAARPTT 63
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = -1
Query: 450 SAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 271
+ V TT T + ++ + +AP +TP E+T+ T A + T S
Sbjct: 513 TTVAPETTIAPETTATPETTAAPETTVAPETTMTPETTAAPETTTAPETTAASETTAASE 572
Query: 270 TPASNTLWSLELLNAQPE 217
T A+ + +A PE
Sbjct: 573 TTAAPKTTAAPKTSAAPE 590
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -1
Query: 450 SAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 271
+ V A TT A T + + + + +AP + P + AEST T A T +
Sbjct: 187 TTVAAETTASAETTVAPETTLAPETTMAPETTMAPETTVAAESTDAPDTTVAAETTASAE 246
Query: 270 T 268
T
Sbjct: 247 T 247
>SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7)
Length = 288
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -1
Query: 513 GEVLPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFL 334
G + + P RA L AF+A AGT +R++ ++ ++S + + TP F
Sbjct: 72 GRITNKTKTPPRRANL-LEAFTAT-AGTPAASRSSSSISLASPGMRSSLGSLQRTPPSFT 129
Query: 333 PAESTSMLSTPAP 295
P S S + P
Sbjct: 130 PRSSISRRRSDTP 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,753,715
Number of Sequences: 59808
Number of extensions: 434471
Number of successful extensions: 1652
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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