Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060601.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.73 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.96 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.3  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   6.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = -1

Query: 354 ITPTPFLPAESTS-----MLSTPAPARPTTFSFTPASNTL 250
           ++P P LP  S+      +L +P PA+    S  PAS  L
Sbjct: 361 VSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLL 400


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 336 LPAESTSMLSTPAPARPTTFSFT 268
           LPA+++S L++P PAR    +FT
Sbjct: 364 LPADNSSALNSPNPARAPPRNFT 386


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/69 (23%), Positives = 24/69 (34%)
 Frame = +2

Query: 143 LRNRHHHQGQDLQGRTSYGDTQPRXSGCAFSNSSDQRVLDAGVKLKVVGRAGAGVDNIDV 322
           + +RHHH    L                A         ++    +   G AG G D  + 
Sbjct: 488 MASRHHHHRAGLHHHDLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSDGPEY 547

Query: 323 DSAGKKGVG 349
           + AG+ GVG
Sbjct: 548 EGAGRGGVG 556


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 314 CCPHQLQHDRPPS 276
           CCP   Q D PPS
Sbjct: 60  CCPQSQQLDSPPS 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,534
Number of Sequences: 2352
Number of extensions: 12637
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)