Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060601.seq
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 32 0.33
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 32 0.44
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 32 0.44
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.58
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 30 1.3
U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidan... 29 2.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 4.1
AF077537-1|AAC26273.2| 111|Caenorhabditis elegans Hypothetical ... 28 5.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.4
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 5.4
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.1
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 28 7.1
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 28 7.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 9.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 9.4
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 9.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 9.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.4
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +2
Query: 272 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARXVVPATTAL 451
KLK+VGRAG GVDNIDV +A + V+N P AN+ SA ELTCTL+L L+R V A ++
Sbjct: 69 KLKLVGRAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASM 128
Query: 452 KAGRWDRALYTGSELAGKT 508
KAG+W R + G E+ G+T
Sbjct: 129 KAGKWARKDFMGEEVYGRT 147
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +3
Query: 72 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHXALVVRSATQVTK 251
M I VLI D + +C ++L GI T K K +K+ELL+ +P H A++VRSAT++T
Sbjct: 1 MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60
Query: 252 E 254
E
Sbjct: 61 E 61
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 275 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 424
LKVV R G G+DNIDV +A + G+ V +APG + T +L+L L R
Sbjct: 243 LKVVFRIGYGIDNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFR 292
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 504 LPASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSAL-APGALITPTPFLPA 328
LPA LP R++L A A ++ I + + L+ L +PGA T P P
Sbjct: 173 LPAPPLPEGLHRTNLSVIGATSA-QPEKSEAEIALSLPVPPLTPLPSPGAQSTAPPVFPT 231
Query: 327 ESTSMLSTPAPARP 286
+ + STP P P
Sbjct: 232 STPTPTSTPTPLLP 245
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 417 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTP 265
R+N ++ SS + P A P P +PA + + STP PA P + +P
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 199
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 417 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTP 265
R+N ++ SS + P A P P +PA + + STP PA P + +P
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 559
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.58
Identities = 27/84 (32%), Positives = 36/84 (42%)
Frame = -1
Query: 492 SLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSM 313
S + S P S T+ + ++ + Q S+ S + G+ T T F A STS
Sbjct: 426 STSTFGTTSETPETSTDFTATSTSSSSDSSTQSSNAQTSTIENGS--TTTNFTSAPSTS- 482
Query: 312 LSTPAPARPTTFSFTPASNTLWSL 241
STPA PTT P T W L
Sbjct: 483 -STPA--TPTTTYNWPTGGTTWML 503
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 348 PTPFLPAESTSMLSTPAPARPTTFSFTPASNT 253
PT LP +T+ +TP P TT + TPA T
Sbjct: 414 PTTPLPTTTTTTTTTPKPTTTTTTTTTPAPTT 445
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 351 TPTPFLPAESTSMLSTPAPA---RPTTFSFTPASNT 253
T TP P +T+ +TPAP +PTT + TPA T
Sbjct: 426 TTTP-KPTTTTTTTTTPAPTTTQKPTTTTTTPAPTT 460
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 TPTPFLPAEST-SMLSTPAPARPTTFSFTPASNT 253
TP P P+ +T S + TPAP PT + TP T
Sbjct: 55 TPAPKTPSRTTKSTVDTPAPKTPTRAAKTPVVKT 88
>U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidance
abnormal protein11 protein.
Length = 189
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 560 HPXVHLAARPCQGPRMARSCQRARCQCT 477
HP VH P MA +CQR +CT
Sbjct: 155 HPKVHQMCNPPSSAAMAETCQRWYSKCT 182
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 486 PVYRARSHLP-AFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSML 310
PV + +++P +F ++ + T+ N+ + LA TP+P P +T +
Sbjct: 142 PVSSSSNNIPGSFQRLIKAVSNIGSTHFNITPIPPTIRNLANSLFPTPSPIRPLPTTKVG 201
Query: 309 STPAP 295
P+P
Sbjct: 202 QCPSP 206
>AF077537-1|AAC26273.2| 111|Caenorhabditis elegans Hypothetical
protein F16G10.5 protein.
Length = 111
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 572 PKGVHPXVHLAARPCQGPRMARSCQRARCQCTEPGPTCQPS 450
P P L R + AR R+R Q +PGPT +PS
Sbjct: 46 PPPRRPRTRLQVRVDREAAEARMRSRSRSQNLDPGPTIEPS 86
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = -1
Query: 486 PVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLS 307
PVY +P + RT ++ +AL P + TP P PA + +
Sbjct: 268 PVYNHYETVPPAAQTTPQPPCTPRTTTTTTTTT-TTTALPP-CVYTPAP--PATAPPATA 323
Query: 306 TPAPARPTTFSFTPASNT 253
TPA P T+S T T
Sbjct: 324 TPATQTPRTYSTTTPIKT 341
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 438 AGTTXRARTNINVQVSSHALSALAPGALITP-TPFLP-AESTSMLSTPAPARPTTFS 274
A T+ A TN+ + S P +P T P + STS S+PAP P T S
Sbjct: 241 ASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTS 297
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -1
Query: 393 SSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTFSFTPASNT 253
S+ S AP L TPT P P ST+ + P P PTT P T
Sbjct: 634 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTT 683
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -1
Query: 393 SSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTFSFTPASNT 253
S+ S AP L TPT P P ST+ + P P PTT P T
Sbjct: 690 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTT 739
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -1
Query: 396 VSSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTFSFTPASNT 253
V + S AP L TPT P P ST+ + P P PTT P T
Sbjct: 512 VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTT 562
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 224 CAFSNSSDQRVLDAGVKLKVVGRA---GAGVDNIDVDSAGKKGVGVINAPGANALSACEL 394
C S++ + VK ++ G G G +++ + A G+G+ G A AC+
Sbjct: 909 CYRMTPSEKATIVNTVKKRIKGNVLAIGDGANDVPMIQAAHVGIGIAGKEGLQAAMACDF 968
Query: 395 TCTLMLVLARXVV 433
L+R ++
Sbjct: 969 AIARFKFLSRLLL 981
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 224 CAFSNSSDQRVLDAGVKLKVVGRA---GAGVDNIDVDSAGKKGVGVINAPGANALSACEL 394
C S++ + VK ++ G G G +++ + A G+G+ G A AC+
Sbjct: 909 CYRMTPSEKATIVNTVKKRIKGNVLAIGDGANDVPMIQAAHVGIGIAGKEGLQAAMACDF 968
Query: 395 TCTLMLVLARXVV 433
L+R ++
Sbjct: 969 AIARFKFLSRLLL 981
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 539 ARPCQGPRMARSCQRARCQCTEPGPTCQPSAQW*LGPRXEPEPTSTCRSART 384
A CQ P A CQ+ + C + P CQ P+ + + C+ +T
Sbjct: 251 APQCQQPS-APQCQQCQNTCQQAAPVCQQQC----APQCQQQSAPACQQCQT 297
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 539 ARPCQGPRMARSCQRARCQCTEPGPTCQPSAQW*LGPRXEPEPTSTCRSART 384
A CQ P A CQ+ + C + P CQ P+ + + C+ +T
Sbjct: 251 APQCQQPS-APQCQQCQNTCQQAAPVCQQQC----APQCQQQSAPACQQCQT 297
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 399 QVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTL 250
Q S + +AP PTP + + L+TP PA + S + A + +
Sbjct: 867 QPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGPAHAPSSSMSHAHHVI 916
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = -1
Query: 501 PASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAES 322
P P Y+A + PA S V + A SSH AP A TPTP P
Sbjct: 1231 PPQPHPSYQAPAPPPALS-VFQHSPQGAPITAPPPASSHHEHIAAPQARFTPTPGAP--- 1286
Query: 321 TSMLSTPAPARPTTFSFTP 265
+ +TPA + T ++ TP
Sbjct: 1287 SPWHATPAELK-TPWNTTP 1304
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = -1
Query: 501 PASSLPVYRARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAES 322
P P Y+A + PA S V + A SSH AP A TPTP P
Sbjct: 1251 PPQPHPSYQAPAPPPALS-VFQHSPQGAPITAPPPASSHHEHIAAPQARFTPTPGAP--- 1306
Query: 321 TSMLSTPAPARPTTFSFTP 265
+ +TPA + T ++ TP
Sbjct: 1307 SPWHATPAELK-TPWNTTP 1324
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = -1
Query: 462 LPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 283
+P F+ + T + SS A P A+ TP P P S + AP P+
Sbjct: 2589 IPLFNEMSGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPETPS 2648
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -1
Query: 477 RARSHLPAFSAVVAGTTXRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPA 298
R+ +L A SA T ++++V V+ +LS PG L P+ E ++
Sbjct: 24 RSVRYLRALSAKNQERTANEHSSVDVAVTQASLSVPRPGILRLPSSDPGEEDPQPSTSSI 83
Query: 297 PARPTTFS 274
P RP+ ++
Sbjct: 84 PHRPSKWA 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,760,208
Number of Sequences: 27780
Number of extensions: 296199
Number of successful extensions: 1239
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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