Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060600.seq
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 152 3e-37
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 152 3e-37
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 144 7e-35
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 5.4
AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine r... 28 5.4
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 28 5.4
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 7.1
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 28 7.1
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 152 bits (368), Expect = 3e-37
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +2
Query: 254 HEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 433
+EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDV 99
Query: 434 LGLLDKHLIPKASNPESKVFYLKMK 508
L LLDK LIPKA ESKVFYLKMK
Sbjct: 100 LNLLDKFLIPKAGAAESKVFYLKMK 124
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +1
Query: 511 DYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTSP 636
DYYRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPT P
Sbjct: 126 DYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHP 167
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 138 MSVDREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 254
MS +EELV RAKLAEQAERYDDMAA+MK+VTE G ELS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELS 39
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 152 bits (368), Expect = 3e-37
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +2
Query: 254 HEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 433
+EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDV 99
Query: 434 LGLLDKHLIPKASNPESKVFYLKMK 508
L LLDK LIPKA ESKVFYLKMK
Sbjct: 100 LNLLDKFLIPKAGAAESKVFYLKMK 124
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +1
Query: 511 DYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTSP 636
DYYRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPT P
Sbjct: 126 DYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHP 167
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 138 MSVDREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 254
MS +EELV RAKLAEQAERYDDMAA+MK+VTE G ELS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELS 39
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 145 bits (352), Expect = 2e-35
Identities = 79/128 (61%), Positives = 93/128 (72%)
Frame = +2
Query: 254 HEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 433
+EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDV 99
Query: 434 LGLLDKHLIPKASNPESKVFYLKMKEITTGTLQKWPQEKPDILL*RIHRKHTKMLLKSAR 613
L LLD+ LI KA ESKVFYLKMK L + E ++ + + + + L A+
Sbjct: 100 LKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVASEDRAAVVEKSQKAYQE-ALDIAK 158
Query: 614 RKCSPLHP 637
K P HP
Sbjct: 159 DKMQPTHP 166
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +3
Query: 138 MSVDREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 254
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELS 39
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 144 bits (348), Expect = 7e-35
Identities = 78/128 (60%), Positives = 92/128 (71%)
Frame = +2
Query: 254 HEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 433
+EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDV 99
Query: 434 LGLLDKHLIPKASNPESKVFYLKMKEITTGTLQKWPQEKPDILL*RIHRKHTKMLLKSAR 613
L LLD+ LI KA ESK FYLKMK L + E ++ + + + + L A+
Sbjct: 100 LKLLDEFLIVKAGAAESKAFYLKMKGDYYRYLAEVASEDRAAVVEKSQKAYQE-ALDIAK 158
Query: 614 RKCSPLHP 637
K P HP
Sbjct: 159 DKMQPTHP 166
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +3
Query: 138 MSVDREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 254
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELS 39
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 511 DYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTSP 636
D++RYL + R S+ AYQ+A I+K KMQPT P
Sbjct: 4 DHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHP 44
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 281 AYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 421
A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI
Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029
>AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein92 protein.
Length = 348
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 573 ILYNRMSGFSCG--HFCKVPVVISFILR*NTLLSGLLAL 463
I + + F CG +F + P++ISFIL NTL+ L+L
Sbjct: 88 IFFPNLVLFGCGVLNFFRFPILISFILGINTLIFMNLSL 126
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 544 LWPLLQGTCSNLFHFEVKHFTFW 476
+WPL +GT + +F F K+F F+
Sbjct: 331 IWPLSRGTSAQIFIFTPKNFQFF 353
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 383 EYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKEITTGTLQKW--PQEKPD 556
EY ++V KE+ ++ L ++ K E +VFYLK K T KW + K D
Sbjct: 225 EYEIRVAKEVSVRLHNELEQTEE----KRCKLEDEVFYLKEKVREIQTQNKWREARNKTD 280
Query: 557 ILL*RI 574
I + R+
Sbjct: 281 IAVKRL 286
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 383 EYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKEITTGTLQKW--PQEKPD 556
EY ++V KE+ ++ L ++ K E +VFYLK K T KW + K D
Sbjct: 225 EYEIRVAKEVSVRLHNELEQTEE----KRCKLEDEVFYLKEKVREIQTQNKWREARNKTD 280
Query: 557 ILL*RI 574
I + R+
Sbjct: 281 IAVKRL 286
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 383 EYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKEITTGTLQKW--PQEKPD 556
EY ++V KE+ ++ L ++ K E +VFYLK K T KW + K D
Sbjct: 225 EYEIRVAKEVSVRLHNELEQTEE----KRCKLEDEVFYLKEKVREIQTQNKWREARNKTD 280
Query: 557 ILL*RI 574
I + R+
Sbjct: 281 IAVKRL 286
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 287 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 385
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = +1
Query: 139 CPSTGKNWCN----VPNWPNKLSDMTTW 210
CP G +WC VP+WP K D W
Sbjct: 594 CPC-GYSWCRHCNKVPHWPLKCGDFAEW 620
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = +1
Query: 139 CPSTGKNWCN----VPNWPNKLSDMTTW 210
CP G +WC VP+WP K D W
Sbjct: 661 CPC-GYSWCRQCNKVPHWPLKCGDFAEW 687
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,858,204
Number of Sequences: 27780
Number of extensions: 330645
Number of successful extensions: 1010
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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