Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060599.seq
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.43 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.1  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    21   7.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
 Frame = +3

Query: 81  GNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNI-----QFQKKTMVSHIYIY 245
           GN   W+    K   G +  R D + TYW +  Q      I        + TM+SH   Y
Sbjct: 190 GNAKHWTGIFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQIATGRYDETRGTMLSHFAYY 249

Query: 246 TD 251
            D
Sbjct: 250 VD 251


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 572 LYYLIVAYCW 543
           L YLIVA CW
Sbjct: 6   LIYLIVACCW 15


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 139 CEMTAWKHTGSLMDNFHT*LTYSFRKKQWY 228
           C     +H G L +   T   Y F+K ++Y
Sbjct: 360 CSTLLLRHEGVLAEAHSTNAAYLFQKDKFY 389


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 172 DCQYVSMQSSRN*SIPNPGLQED 104
           +C  +++Q+    S+ NP ++ED
Sbjct: 167 ECDEITIQAILEFSVTNPTIKED 189


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 635 PIGSDYGQPTKSTFFP 588
           P+G+   Q T  TF+P
Sbjct: 192 PVGTQIHQQTNHTFYP 207


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 308 FNDLQEIEVIELIEPSGWEMIPI 376
           ++DLQE++ +EL+      + P+
Sbjct: 40  YSDLQEMKYLELVIKEALRLYPL 62


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 257 LDESYTPSRISIRAGTH 307
           LDE   PS+I++  GT+
Sbjct: 248 LDEGAPPSKINLGLGTY 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,432
Number of Sequences: 336
Number of extensions: 3975
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)