Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060599.seq
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.9  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   6.7  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   6.7  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 6   QKKTLMAGLEKDPLVYERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQ 182
           Q   L A  E+   V   S  +R   N+  W+ SSCK    +  + +  ++  W S+ Q
Sbjct: 29  QNLVLQAAREEKADVLILSDVLRPPENNGRWAFSSCK-AVAVVAVGELPIQRVWCSEAQ 86


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 293 LLIFCLVYSFHLIIV 249
           +L+ CL+Y+F LI++
Sbjct: 214 VLVMCLMYTFPLIVI 228


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 293 LLIFCLVYSFHLIIV 249
           +L+ CL+Y+F LI++
Sbjct: 214 VLVMCLMYTFPLIVI 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,836
Number of Sequences: 2352
Number of extensions: 14895
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)