Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060599.seq
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071207-1|AAL48829.2|  195|Drosophila melanogaster RE25242p pro...   134   8e-32
AE013599-2493|AAF57848.2|  195|Drosophila melanogaster CG11419-P...   134   8e-32

>AY071207-1|AAL48829.2|  195|Drosophila melanogaster RE25242p
           protein.
          Length = 195

 Score =  134 bits (325), Expect = 8e-32
 Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 4/136 (2%)
 Frame = +2

Query: 149 LHGNILAV*WTTSTLS*HTVS---EKNNGITYLHLH*-L*LDESYTPSRISIRAGTHFND 316
           L  NI+   W +     H V+    K   I+ ++++    LDESYTPSRISIR+GT+FND
Sbjct: 53  LRDNIMDTYWQSDGQLPHLVNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFND 112

Query: 317 LQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEP 496
           LQE++V++L EP+GW  IPIKD + + IRT+M+QIAV+SNHQNGRDTHMRQI++H+P E 
Sbjct: 113 LQELQVMDLTEPTGWVQIPIKDGNVKSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEG 172

Query: 497 TSFD*ISLEIFQLFNS 544
             +    LE+F  F +
Sbjct: 173 KHY---PLELFGKFGT 185



 Score =  128 bits (310), Expect = 5e-30
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = +3

Query: 33  EKDPLVYERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQ 212
           E+DPL  ER G VREVG  A+WSLSSCKPGFG+++LRD+ M+TYWQSDGQLPHLVNIQF 
Sbjct: 18  EEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFH 77

Query: 213 KKTMVSHIYIYTDY 254
           K+T +S IYIYTDY
Sbjct: 78  KRTNISQIYIYTDY 91


>AE013599-2493|AAF57848.2|  195|Drosophila melanogaster CG11419-PA
           protein.
          Length = 195

 Score =  134 bits (325), Expect = 8e-32
 Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 4/136 (2%)
 Frame = +2

Query: 149 LHGNILAV*WTTSTLS*HTVS---EKNNGITYLHLH*-L*LDESYTPSRISIRAGTHFND 316
           L  NI+   W +     H V+    K   I+ ++++    LDESYTPSRISIR+GT+FND
Sbjct: 53  LRDNIMDTYWQSDGQLPHLVNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFND 112

Query: 317 LQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEP 496
           LQE++V++L EP+GW  IPIKD + + IRT+M+QIAV+SNHQNGRDTHMRQI++H+P E 
Sbjct: 113 LQELQVMDLTEPTGWVQIPIKDGNVKSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEG 172

Query: 497 TSFD*ISLEIFQLFNS 544
             +    LE+F  F +
Sbjct: 173 KHY---PLELFGKFGT 185



 Score =  128 bits (310), Expect = 5e-30
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = +3

Query: 33  EKDPLVYERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQ 212
           E+DPL  ER G VREVG  A+WSLSSCKPGFG+++LRD+ M+TYWQSDGQLPHLVNIQF 
Sbjct: 18  EEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFH 77

Query: 213 KKTMVSHIYIYTDY 254
           K+T +S IYIYTDY
Sbjct: 78  KRTNISQIYIYTDY 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,613,536
Number of Sequences: 53049
Number of extensions: 643438
Number of successful extensions: 1485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)