Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060598.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 3e-37
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 8e-32
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 85 7e-17
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 47 2e-05
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 32 0.50
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 0.66
SB_2208| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 28 6.1
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35) 28 6.1
SB_50759| Best HMM Match : PH (HMM E-Value=0.07) 28 8.1
SB_41815| Best HMM Match : zf-CXXC (HMM E-Value=3.5e-17) 28 8.1
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 152 bits (368), Expect = 3e-37
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFDYKTC+V+ A++QQSP+IA GV
Sbjct: 6 TGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDIAQGV 65
Query: 435 HXNRNDEEVGAGDQGLMFGYATDET 509
H R+DE++GAGDQGLMFGYATDET
Sbjct: 66 HIGRSDEDLGAGDQGLMFGYATDET 90
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +2
Query: 509 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVF 640
+E MPLTVVLAH LN+++A+ RRNG W RPDSKTQVT EY F
Sbjct: 91 DELMPLTVVLAHGLNKRLADCRRNGSLPWVRPDSKTQVTVEYKF 134
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 142 bits (345), Expect = 2e-34
Identities = 64/86 (74%), Positives = 75/86 (87%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGM+LLCGEITS A VDYQ VVR+ +K IGYDDS KGFDYKTC+V++AL+QQS +IA GV
Sbjct: 75 TGMILLCGEITSNAVVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHGV 134
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETK 512
H R +E+VGAGDQGLMFGYATDET+
Sbjct: 135 HVGREEEDVGAGDQGLMFGYATDETE 160
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +1
Query: 118 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACET+ K
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAK 74
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 509 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVF 640
EE MPLTVVLAHK+NQK+AE RR+G WARPDSKTQVT EY F
Sbjct: 160 EELMPLTVVLAHKMNQKLAEYRRDGTLPWARPDSKTQVTVEYKF 203
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 134 bits (323), Expect = 8e-32
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TG+VLL GEITS A VDYQ VVR T++ IGY+DSS GFDYKTCSV+LA+ +Q IA V
Sbjct: 96 TGLVLLFGEITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQTV 155
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETK 512
H NR D+E+GAGDQGLMFGYATDET+
Sbjct: 156 HLNRRDDEIGAGDQGLMFGYATDETE 181
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = +1
Query: 100 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
Y D FLFTSESV EGH DKMCDQISDA+LDAHL QDP AKVACET TK
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATK 95
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2
Query: 509 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEY 634
EE MPLT VLAHKL ++AE R+ W PD KTQVT +Y
Sbjct: 181 EELMPLTTVLAHKLCARLAECRKGKILPWLLPDGKTQVTVDY 222
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 118 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACE++ K
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAK 54
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 362
TGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSK
Sbjct: 55 TGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSK 90
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 118 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 240
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 509 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEY 634
+ MP V AH+L ++ +ELRRNG W RPD+K+QVT +
Sbjct: 27 DSLMPAPVYYAHRLVERQSELRRNGTLPWLRPDAKSQVTINW 68
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 453 EEVGAGDQGLMFGYATDET 509
E+ GAGDQGLMFGYAT+ET
Sbjct: 8 EDQGAGDQGLMFGYATNET 26
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 136
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 136
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 311 LIIHVSFGCDFATQ--KHHTGLVMVSHATFASGS*FRCASRIASLIWSHILSG 159
L H++F C + H +S + A + FRC+ R S++W H+ +G
Sbjct: 263 LTCHLNFACRVCRTYPRLHVIPSSISDSDLAKVASFRCSGRFPSIVWRHMTNG 315
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 276 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDYK 377
GEITS N+D +K+ + K I YD G+DY+
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_2208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -2
Query: 666 CGELLHHQPNTYSQVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTVNGMHSSSHLLHNR 487
C +L+ HQ + VTC F S A ++ ++S++F LSL +V + +S L ++
Sbjct: 64 CSDLIDHQRPSVCMVTCQFNSRCAVSSA--GVTSSLFALSLRDGRSVLDLTYTSTLTRSK 121
Query: 486 T 484
T
Sbjct: 122 T 122
>SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 148 GEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKPVWCFCVAKSHPKL 297
G G D++ + +L A +N A T TKPV + +A HP++
Sbjct: 391 GLGRLDRLVEAFVYTVLGAQVNVRSSIANAINTETKPVGAYNMAGGHPRV 440
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 49 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 225
MP G +K N + D D +L +S+ + D++C + I AHL QDPD
Sbjct: 196 MPYGGGKRGKSKKNSSTLDTGDLETWLKGRKSITRVRNHDELCAARALVIGMAHLTQDPD 255
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 452 RGSWGRRPGLDVRLCNR*DEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCE 631
+GS G +PG D R ++ D+E P +++ ++++ + + N F + + +VT E
Sbjct: 39 QGSAGEKPGTDSRKSSKMDQENRPEAILVHNEVHPESDKETHNPGFARSLSTRERRVTLE 98
Query: 632 Y 634
+
Sbjct: 99 W 99
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 49 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 225
MP + G +K N + D D +L S+ + D++C + I AHL +DPD
Sbjct: 241 MPFGAGKRGKSKKNSSTLDTGDLETWLKGKRSITRVRNHDELCAARATVIGMAHLTKDPD 300
>SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35)
Length = 323
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 332 DRFAHNFLIIHVSFGCDFATQKHHTGLVMV 243
D F NF++I + CDF T K+ +G ++V
Sbjct: 208 DSFITNFVVIVLLLSCDFWTVKNVSGRLLV 237
>SB_50759| Best HMM Match : PH (HMM E-Value=0.07)
Length = 320
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 217 DPDAKVACETITKPVWCFCVAKSHPKLTWIIKKLCAKRSNI 339
DPD + C+ +T+P+ + +A SH T+++ + RS+I
Sbjct: 265 DPDQQNICQDMTQPLSHYFIASSHN--TYLLDNQLSGRSSI 303
>SB_41815| Best HMM Match : zf-CXXC (HMM E-Value=3.5e-17)
Length = 906
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 505 RRRMHAVDCSACTQTQSENCRAQAKWRILVGKTRFKNTGYLRIC 636
RRR C ACT+ CR + G R K + R C
Sbjct: 486 RRRTRCGQCEACTREDCGECRTCKDMKKFGGPGRMKQSCTKRAC 529
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,537,435
Number of Sequences: 59808
Number of extensions: 554780
Number of successful extensions: 1603
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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