Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060598.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 151 3e-37
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 151 3e-37
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 148 3e-36
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 147 7e-36
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 144 7e-35
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 137 6e-33
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 99 3e-21
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 95 3e-20
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 89 3e-18
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical ... 29 3.1
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 29 4.1
Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 27 9.4
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 9.4
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 151 bits (367), Expect = 3e-37
Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQ 605
H +++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E + D
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE-WVRPD- 167
Query: 606 IQKHRLLANMYLAGGATVPHREFHTV 683
K ++ GGA VP R HTV
Sbjct: 168 -SKTQVTIEYASEGGACVPLR-VHTV 191
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 151 bits (367), Expect = 3e-37
Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQ 605
H +++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E + D
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE-WVRPD- 167
Query: 606 IQKHRLLANMYLAGGATVPHREFHTV 683
K ++ GGA VP R HTV
Sbjct: 168 -SKTQVTIEYASEGGACVPLR-VHTV 191
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 148 bits (359), Expect = 3e-36
Identities = 81/146 (55%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQ 605
H +++ +VGAGDQG+MFGYATDET+ A L + +L+ SGE+E + D
Sbjct: 110 HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE-WVRPD- 167
Query: 606 IQKHRLLANMYLAGGATVPHREFHTV 683
K ++ GGA VP R HTV
Sbjct: 168 -SKTQVTIEYSSEGGACVPLR-VHTV 191
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 147 bits (356), Expect = 7e-36
Identities = 79/144 (54%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = +3
Query: 261 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHX 440
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 441 NRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQIQ 611
+++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E + D
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE-WVRPD--S 117
Query: 612 KHRLLANMYLAGGATVPHREFHTV 683
K ++ GGA VP R HTV
Sbjct: 118 KTQVTIEYASEGGACVPLR-VHTV 140
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 144 bits (348), Expect = 7e-35
Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Frame = +3
Query: 261 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHX 440
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 441 NRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQIQ 611
+++ +VGAGDQG+MFGYATDET+ A L + +L+ SGE+E + D
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE-WVRPD--S 117
Query: 612 KHRLLANMYLAGGATVPHREFHTV 683
K ++ GGA VP R HTV
Sbjct: 118 KTQVTIEYSSEGGACVPLR-VHTV 140
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 137 bits (332), Expect = 6e-33
Identities = 61/86 (70%), Positives = 76/86 (88%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 434
TGMV+LCGEITSKA VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGV
Sbjct: 49 TGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV 108
Query: 435 HXNRNDEEVGAGDQGLMFGYATDETK 512
H N++ E+VGAGDQG+MFGYATDET+
Sbjct: 109 HVNKDGEDVGAGDQGIMFGYATDETE 134
Score = 91.5 bits (217), Expect = 5e-19
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +1
Query: 118 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TK
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTK 48
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +2
Query: 509 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEY 634
EE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY
Sbjct: 134 EETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEY 175
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 99.1 bits (236), Expect = 3e-21
Identities = 56/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Frame = +3
Query: 342 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHXNRNDEEVGAGDQGLMFGYATDETKNAC 521
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDET+ A
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 522 R*L*CLH---TNSIRKLQSSGEMENFGGQDQIQKHRLLANMYLAGGATVPHREFHTV 683
L + +L+ SGE+E + D K ++ GGA +P R HTV
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELE-WVRPD--SKTQVTIEYASEGGACIPLR-VHTV 132
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +3
Query: 336 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHXNRNDEEVGAGDQGLMFGYATDE 506
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 507 TKNACR*L*CLH---TNSIRKLQSSGEMENFGGQDQIQKHRLLANMYLAGGATVPHREFH 677
T+ A L + +L+ SGE+E + D K ++ GGA +P R H
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELE-WVRPD--SKTQVTIEYASEGGACIPLR-VH 148
Query: 678 TV 683
TV
Sbjct: 149 TV 150
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 240
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 255
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 255 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKG 365
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKG
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKG 86
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 240
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 124 FLFTSESVGEGHPDKMCDQ 180
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical
protein H06H21.6 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 127 LFTSESVGEGHPDKMCDQISDA--ILDAHLNQDPDAKVACETITKPVWCFCVAKSHPKLT 300
L+TSE +GE H D + D L +++ D + I + + + K HPK T
Sbjct: 123 LYTSELLGEHHIRSKADLLEDIKNFLSDQISEADDEN--DKVIAAVLMLYSLNKKHPKET 180
Query: 301 WIIKKLCAKRSNIL 342
I+ +C NIL
Sbjct: 181 -AIETICKYCQNIL 193
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 244 TITKPVWCFCVAKSHPKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 381
T ++P PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 238 TSSQPPPVVICRNDEPKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical
protein D1086.5 protein.
Length = 225
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 163 DKMCDQISDAILDAHLNQDPDAKVACETITKPVWCF 270
+K DQ+S+ + D N++PD KV C +I CF
Sbjct: 122 EKTPDQVSECVKDYLKNKNPD-KVDCVSIQTKSKCF 156
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 253 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 378
KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 298 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 399
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,122,524
Number of Sequences: 27780
Number of extensions: 419588
Number of successful extensions: 1170
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -