Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060597.seq
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006665-1|AAP35311.1| 529|Homo sapiens karyopherin alpha 2 (RA... 56 2e-07
BC005978-1|AAH05978.1| 529|Homo sapiens karyopherin alpha 2 (RA... 56 2e-07
U28386-1|AAA69957.1| 529|Homo sapiens hSRP1alpha protein. 55 2e-07
U09559-1|AAA65700.1| 529|Homo sapiens Rch1 protein. 55 2e-07
BC067848-1|AAH67848.1| 529|Homo sapiens karyopherin alpha 2 (RA... 55 2e-07
BC053343-1|AAH53343.1| 529|Homo sapiens karyopherin alpha 2 (RA... 55 2e-07
BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3 (im... 55 2e-07
AJ303086-1|CAC83080.1| 529|Homo sapiens karyopherin alpha 2 pro... 55 2e-07
Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein. 53 8e-07
D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein. 53 8e-07
BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3 (im... 53 8e-07
BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3 (im... 53 8e-07
AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3 (im... 53 8e-07
AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3 (im... 53 8e-07
AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog ... 53 8e-07
AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subuni... 53 8e-07
BT009843-1|AAP88845.1| 536|Homo sapiens karyopherin alpha 6 (im... 53 1e-06
BC020520-1|AAH20520.1| 536|Homo sapiens karyopherin alpha 6 (im... 53 1e-06
AL445248-5|CAH71948.1| 536|Homo sapiens karyopherin alpha 6 (im... 53 1e-06
AL049795-3|CAI22056.1| 536|Homo sapiens karyopherin alpha 6 (im... 53 1e-06
AF060543-1|AAC15233.1| 536|Homo sapiens importin alpha 7 subuni... 53 1e-06
BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5 (im... 52 2e-06
AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5 (im... 52 2e-06
AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein. 52 2e-06
Y12393-1|CAA73025.1| 281|Homo sapiens SRP1-like protein protein. 51 3e-06
U93240-1|AAC25605.1| 521|Homo sapiens importin alpha 3 protein. 51 3e-06
BC034493-1|AAH34493.1| 521|Homo sapiens karyopherin alpha 4 (im... 51 3e-06
BC028691-1|AAH28691.1| 521|Homo sapiens karyopherin alpha 4 (im... 51 3e-06
AB002533-1|BAA19546.1| 521|Homo sapiens Qip1 protein. 51 3e-06
AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3 var... 48 4e-05
S75295-1|AAC60648.1| 538|Homo sapiens nucleoprotein interactor ... 47 5e-05
CR456743-1|CAG33024.1| 538|Homo sapiens KPNA1 protein. 47 5e-05
BT006959-1|AAP35605.1| 538|Homo sapiens karyopherin alpha 1 (im... 47 5e-05
BC090864-1|AAH90864.1| 538|Homo sapiens karyopherin alpha 1 (im... 47 5e-05
BC003009-1|AAH03009.1| 538|Homo sapiens karyopherin alpha 1 (im... 47 5e-05
BC002374-1|AAH02374.1| 538|Homo sapiens karyopherin alpha 1 (im... 47 5e-05
AL049795-1|CAI22054.1| 321|Homo sapiens karyopherin alpha 6 (im... 38 0.025
AF036977-1|AAD02090.1| 331|Homo sapiens unknown protein. 31 2.9
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 8.8
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 30 8.8
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 8.8
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 8.8
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 8.8
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 8.8
>BT006665-1|AAP35311.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD +
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAA 451
Query: 281 ENLRKFNSHTLLL 319
ENL + ++++
Sbjct: 452 ENLGETEKLSIMI 464
>BC005978-1|AAH05978.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD +
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAA 451
Query: 281 ENLRKFNSHTLLL 319
ENL + ++++
Sbjct: 452 ENLGETEKLSIMI 464
>U28386-1|AAA69957.1| 529|Homo sapiens hSRP1alpha protein.
Length = 529
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILD 442
>U09559-1|AAA65700.1| 529|Homo sapiens Rch1 protein.
Length = 529
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILD 442
>BC067848-1|AAH67848.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILD 442
>BC053343-1|AAH53343.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILD 442
>BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ D++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQDVIPPFCNLLSVKDSQVVQVVLD 433
>AJ303086-1|CAC83080.1| 529|Homo sapiens karyopherin alpha 2
protein.
Length = 529
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
+ QKEA WA+TN GGT EQ+ ++ C I+ P LL A+D + I+V+LD
Sbjct: 392 KTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILD 442
>Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog
protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subunit
protein.
Length = 521
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>BT009843-1|AAP88845.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
R +KEAAWAITN GGTPEQ+ ++S + P C LL D + + V L+
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALN 443
>BC020520-1|AAH20520.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
R +KEAAWAITN GGTPEQ+ ++S + P C LL D + + V L+
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALN 443
>AL445248-5|CAH71948.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
R +KEAAWAITN GGTPEQ+ ++S + P C LL D + + V L+
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALN 443
>AL049795-3|CAI22056.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
R +KEAAWAITN GGTPEQ+ ++S + P C LL D + + V L+
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALN 443
>AF060543-1|AAC15233.1| 536|Homo sapiens importin alpha 7 subunit
protein.
Length = 536
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
R +KEAAWAITN GGTPEQ+ ++S + P C LL D + + V L+
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALN 443
>BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GGTPEQ+ +++ + P C LL D + + V L+ R
Sbjct: 396 RTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 455
Query: 281 ENLRKFN 301
E K N
Sbjct: 456 EQESKQN 462
>AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GGTPEQ+ +++ + P C LL D + + V L+ R
Sbjct: 396 RTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 455
Query: 281 ENLRKFN 301
E K N
Sbjct: 456 EQESKQN 462
>AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein.
Length = 536
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GGTPEQ+ +++ + P C LL D + + V L+ R
Sbjct: 393 RTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 452
Query: 281 ENLRKFN 301
E K N
Sbjct: 453 EQESKQN 459
>Y12393-1|CAA73025.1| 281|Homo sapiens SRP1-like protein protein.
Length = 281
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q+ ++ +++ P+C LL +D + + VVLD
Sbjct: 145 QKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLD 193
>U93240-1|AAC25605.1| 521|Homo sapiens importin alpha 3 protein.
Length = 521
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q+ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLD 433
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQA 220
Q EAAWA+TN+ GT EQ A++ + + + LL +
Sbjct: 132 QFEAAWALTNIA-SGTSEQTQAVVQSNAVPLFLRLLHS 168
>BC034493-1|AAH34493.1| 521|Homo sapiens karyopherin alpha 4
(importin alpha 3) protein.
Length = 521
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q+ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLD 433
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQA 220
Q EAAWA+TN+ GT EQ A++ + + + LL +
Sbjct: 132 QFEAAWALTNIA-SGTSEQTQAVVQSNAVPLFLRLLHS 168
>BC028691-1|AAH28691.1| 521|Homo sapiens karyopherin alpha 4
(importin alpha 3) protein.
Length = 521
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q+ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLD 433
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQA 220
Q EAAWA+TN+ GT EQ A++ + + + LL +
Sbjct: 132 QFEAAWALTNIA-SGTSEQTQAVVQSNAVPLFLRLLHS 168
>AB002533-1|BAA19546.1| 521|Homo sapiens Qip1 protein.
Length = 521
Score = 51.2 bits (117), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAAWAI+NL + G +Q+ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLD 433
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQA 220
Q EAAWA+TN+ GT EQ A++ + + + LL +
Sbjct: 132 QFEAAWALTNIA-SGTSEQTQAVVQSNAVPLFLRLLHS 168
>AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3
variant protein.
Length = 521
Score = 47.6 bits (108), Expect = 4e-05
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2
Query: 107 QKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLD 253
QKEAA AI+NL + G +Q++ ++ +++ P+C LL +D + + VVLD
Sbjct: 385 QKEAARAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLD 433
>S75295-1|AAC60648.1| 538|Homo sapiens nucleoprotein interactor 1
protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>CR456743-1|CAG33024.1| 538|Homo sapiens KPNA1 protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>BT006959-1|AAP35605.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>BC090864-1|AAH90864.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>BC003009-1|AAH03009.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>BC002374-1|AAH02374.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 47.2 bits (107), Expect = 5e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAIIVVLDDSLIYCRYD 280
R +KEAAWAITN GG+ EQ+ ++ + P C LL D + + V L+ R
Sbjct: 395 RTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 454
Query: 281 ENLRKFN 301
E K N
Sbjct: 455 EQEAKRN 461
>AL049795-1|CAI22054.1| 321|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 321
Score = 38.3 bits (85), Expect = 0.025
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 101 RCQKEAAWAITNLCLGGTPEQL 166
R +KEAAWAITN GGTPEQ+
Sbjct: 300 RTRKEAAWAITNATSGGTPEQI 321
>AF036977-1|AAD02090.1| 331|Homo sapiens unknown protein.
Length = 331
Score = 31.5 bits (68), Expect = 2.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 129 SQTCALEAPLNNWTPCCPVIFCRR 200
S C E+P NWTPC ++ C R
Sbjct: 305 SSLCITESPSQNWTPCLLLLTCPR 328
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 105 ARRKRPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRP 221
A +K P P ++P NW+P PV + P P
Sbjct: 760 AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 798
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 117 RPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRPGTTEPSS*CWMTHSSIAGM 278
R P +TC L + P C + C + P GT E S W + S + M
Sbjct: 2897 RGSPERTCLLNGSWSGLQPVCEAVLCPQPPPVQN-GTVEGSDFRWGSSISYSCM 2949
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 105 ARRKRPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRP 221
A +K P P ++P NW+P PV + P P
Sbjct: 760 AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 798
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 105 ARRKRPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRP 221
A +K P P ++P NW+P PV + P P
Sbjct: 769 AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 807
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 105 ARRKRPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRP 221
A +K P P ++P NW+P PV + P P
Sbjct: 760 AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 798
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 105 ARRKRPGPSQTCALEAPLNNWTPCCPVIFCRRTAPCSRP 221
A +K P P ++P NW+P PV + P P
Sbjct: 769 AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 807
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,264,164
Number of Sequences: 237096
Number of extensions: 2161028
Number of successful extensions: 9003
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 8688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9001
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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