Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060597.seq
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    27   0.13 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.51 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.88 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 313 TTTISLHLGVFLVCW 357
           T T+++ LGVFL+CW
Sbjct: 618 TKTLAIVLGVFLICW 632


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 224 DHRAIIVVLDDSLIYCRYDENLRKFNSHTL 313
           DH   ++ L   L +C YD N+R  +SH +
Sbjct: 39  DHPTTLLKLKRYL-FCEYDPNVRPISSHQI 67


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 TISLHLGVFLVCW 357
           T+ + +GVFL+CW
Sbjct: 273 TVGVIMGVFLICW 285


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 TISLHLGVFLVCW 357
           T+ + +GVF++CW
Sbjct: 336 TLGIVMGVFIICW 348


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 TISLHLGVFLVCW 357
           T+ + +GVF+VCW
Sbjct: 328 TLGVIMGVFVVCW 340


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 TISLHLGVFLVCW 357
           T+ + +GVF+VCW
Sbjct: 328 TLGVIMGVFVVCW 340


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 319 TISLHLGVFLVCW 357
           T+ + +GVF+VCW
Sbjct: 328 TLGVIMGVFVVCW 340


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -3

Query: 235 GSVVPGLEQGAVRRQNITGQHGVQLFRGASKAQVCDG 125
           G  V G++QG    Q   G  GVQ  +G    Q   G
Sbjct: 834 GLGVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQG 870


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 313 TTTISLHLGVFLVCW 357
           +TT+ + +  F+VCW
Sbjct: 371 STTLGIIMSAFIVCW 385


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +2

Query: 212 LQARDHRAIIVVLDDS----LIYCRYDENLRKFNSHTL 313
           +QA D    +V + D+    +IY   D++  + +SHTL
Sbjct: 192 VQAMDSTNTMVYMVDNKNTLIIYQNADDSFHRLSSHTL 229


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 616 FTCSLILYVHTTPH 575
           FTCS  L VHT  H
Sbjct: 213 FTCSKQLKVHTRTH 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,288
Number of Sequences: 438
Number of extensions: 4353
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)