Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060595.seq
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FHH9 Cluster: DNA-binding protein-like; n=7; Viridipl...    36   0.67 
UniRef50_P32634 Cluster: Negative regulator of sporulation PMD1;...    34   2.7  
UniRef50_Q7RLW4 Cluster: Putative bir1 protein; n=24; Plasmodium...    34   3.6  
UniRef50_A2DCH1 Cluster: 3'5'-cyclic nucleotide phosphodiesteras...    34   3.6  
UniRef50_Q53654 Cluster: Collagen adhesin precursor; n=9; Staphy...    34   3.6  
UniRef50_Q54EY5 Cluster: LIM domain-containing protein; n=2; Dic...    33   4.8  
UniRef50_Q6D6A9 Cluster: Putative exported protein; n=1; Pectoba...    33   6.3  
UniRef50_Q9V9E3 Cluster: Presequence protease, mitochondrial pre...    33   6.3  
UniRef50_UPI00015B57A8 Cluster: PREDICTED: similar to conserved ...    33   8.3  
UniRef50_Q8EWV2 Cluster: Predicted integral membrane protein; n=...    33   8.3  

>UniRef50_Q9FHH9 Cluster: DNA-binding protein-like; n=7;
           Viridiplantae|Rep: DNA-binding protein-like -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 889

 Score = 36.3 bits (80), Expect = 0.67
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 345 NHTGNPVMSQHTHRIRPTPPISKPIQGGYIKEEKFNLPTSLENASVTFPEVIPQQGLKFK 524
           +H G    SQH HR R  PP S+P       E + NL +S+  A ++FPE     G + K
Sbjct: 746 HHRGETERSQHHHRKRSEPPSSEPPVPATKAEIENNLKSSV-FARISFPEEETSSGKRRK 804

Query: 525 I 527
           +
Sbjct: 805 V 805


>UniRef50_P32634 Cluster: Negative regulator of sporulation PMD1;
           n=2; Saccharomyces cerevisiae|Rep: Negative regulator of
           sporulation PMD1 - Saccharomyces cerevisiae (Baker's
           yeast)
          Length = 1753

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 264 TNETGLLDIDTKCKPEISSSPQVSPNYNHT 353
           TNE   LD+ TKC   IS +PQ++  +NH+
Sbjct: 163 TNELWKLDLKTKCWSLISENPQITRRFNHS 192


>UniRef50_Q7RLW4 Cluster: Putative bir1 protein; n=24; Plasmodium
           yoelii yoelii|Rep: Putative bir1 protein - Plasmodium
           yoelii yoelii
          Length = 388

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +3

Query: 42  KIMPKFVNKNNFQKHLIKFLLWFYGLRIVKNGY*SFYECGRFQ 170
           K++P F+N NNF    IK +++ YG  +++N     ++C RFQ
Sbjct: 17  KVIPYFINNNNF---CIKCIIYTYGKGVLRN---PIFKCKRFQ 53


>UniRef50_A2DCH1 Cluster: 3'5'-cyclic nucleotide phosphodiesterase
           family protein; n=1; Trichomonas vaginalis G3|Rep:
           3'5'-cyclic nucleotide phosphodiesterase family protein
           - Trichomonas vaginalis G3
          Length = 1106

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 228 DKIRTGTNFVDNTNETGLLDIDTKC-KPEISSSPQVSPNYNHTGNPVMSQH 377
           ++I+   N  DN  E    + + KC K E+ +S   +P  +  GNPV +QH
Sbjct: 670 EEIKANENQTDNQVEKPNAESNNKCEKKEMPNSVPPTPEVDERGNPVFNQH 720


>UniRef50_Q53654 Cluster: Collagen adhesin precursor; n=9;
            Staphylococcus aureus|Rep: Collagen adhesin precursor -
            Staphylococcus aureus
          Length = 1183

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 25/88 (28%), Positives = 38/88 (43%)
 Frame = +3

Query: 231  KIRTGTNFVDNTNETGLLDIDTKCKPEISSSPQVSPNYNHTGNPVMSQHTHRIRPTPPIS 410
            K+   T  VDN N+ G L +  K  P+  + P           P    H+++++PTPP  
Sbjct: 1069 KVNGYTTHVDN-NDMGNLIVTNKYTPKKPNKPIYPEKPKDKTPPTKPDHSNKVKPTPP-D 1126

Query: 411  KPIQGGYIKEEKFNLPTSLENASVTFPE 494
            KP +     + K N  T  EN     P+
Sbjct: 1127 KPSKVDKDDQPKDN-KTKPENPLKELPK 1153


>UniRef50_Q54EY5 Cluster: LIM domain-containing protein; n=2;
           Dictyostelium discoideum|Rep: LIM domain-containing
           protein - Dictyostelium discoideum AX4
          Length = 700

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 240 TGTNFVDNTNETGLLDIDTKCKPEI-SSSPQVSPNYNHTGNPVMSQHTHRIRPTPPISK 413
           + TN    T  T    I T  KP   +++P   P+ +    PV+ Q T  +RP P ISK
Sbjct: 113 SSTNTTSTTTTTTTKPIQTPLKPSAPTATPTAKPSIS-ISKPVVKQSTGVLRPAPVISK 170


>UniRef50_Q6D6A9 Cluster: Putative exported protein; n=1;
           Pectobacterium atrosepticum|Rep: Putative exported
           protein - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 164

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 219 GFYDKIRTGTNFVDNTNETGLLDIDTKCKPEISSSPQVSPNYNHTGNPVMSQHTHRIRPT 398
           G Y+ + T TN    T+ T          P   S     P++NHTGN +   H  ++  +
Sbjct: 39  GLYE-VGTTTNSTTTTHSTTSTTAHDTTAPASHSGSIAEPHHNHTGNAMPEHHAAQLHHS 97

Query: 399 P 401
           P
Sbjct: 98  P 98


>UniRef50_Q9V9E3 Cluster: Presequence protease, mitochondrial
           precursor; n=5; Diptera|Rep: Presequence protease,
           mitochondrial precursor - Drosophila melanogaster (Fruit
           fly)
          Length = 1034

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -3

Query: 652 ALWN-----IINLKTFDLLSGHRLDIS-SRTQINKHGALYYLLKNHRLILNLSP 509
           ALWN     + NL+  D++SG R  IS ++    +    Y+   NHRL L +SP
Sbjct: 478 ALWNHDGDVVSNLRVSDMISGLRESISQNKKYFQEKIEKYFANNNHRLTLTMSP 531


>UniRef50_UPI00015B57A8 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 775

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 225 YDKIRTGTNFVDNTNETGLLDIDTKCKPEISSSPQ--VSPNYNHTG 356
           Y+K+R        T+  GL D+DT  +P   S P   + PNY   G
Sbjct: 646 YEKVRLCKRPTSATSNIGLEDVDTDSEPNYESMPHDPIEPNYASVG 691


>UniRef50_Q8EWV2 Cluster: Predicted integral membrane protein; n=1;
           Mycoplasma penetrans|Rep: Predicted integral membrane
           protein - Mycoplasma penetrans
          Length = 679

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 240 TGTNFVDNTNETGLLDIDTKCKPEISSSPQVSPNYN 347
           TGTNF +NTN+ G L++  + KP  S+    +PN N
Sbjct: 225 TGTNFSENTNQIGYLNVTEQGKP--SAVQGYTPNSN 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,595,914
Number of Sequences: 1657284
Number of extensions: 14041149
Number of successful extensions: 37922
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37902
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)